Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
Col1a1P11087 Gm18982-201ENSMUST00000198118 529 ntBASIC1.29□□□□□ -2.2
Col1a1P11087 Igkv1-108-201ENSMUST00000198926 298 ntBASIC1.29□□□□□ -2.2
Col1a1P11087 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC1.29□□□□□ -2.2
Col1a1P11087 Gm24151-201ENSMUST00000082758 141 ntBASIC1.29□□□□□ -2.2
Col1a1P11087 Snord14a-201ENSMUST00000082807 87 ntBASIC1.29□□□□□ -2.2
Col1a1P11087 Mir93-201ENSMUST00000083593 88 ntBASIC1.29□□□□□ -2.2
Col1a1P11087 Fam46d-201ENSMUST00000101292 2995 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
Col1a1P11087 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
Col1a1P11087 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
Col1a1P11087 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
Col1a1P11087 Gm26105-201ENSMUST00000157253 190 ntBASIC1.28□□□□□ -2.2
Col1a1P11087 Gm25368-201ENSMUST00000158847 131 ntBASIC1.28□□□□□ -2.2
Col1a1P11087 Gm25166-201ENSMUST00000158909 111 ntBASIC1.28□□□□□ -2.2
Col1a1P11087 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
Col1a1P11087 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC1.28□□□□□ -2.2
Col1a1P11087 Gm27265-201ENSMUST00000183559 77 ntBASIC1.28□□□□□ -2.2
Col1a1P11087 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC1.28□□□□□ -2.2
Col1a1P11087 Gm44052-201ENSMUST00000203382 396 ntBASIC1.28□□□□□ -2.2
Col1a1P11087 Gm45268-201ENSMUST00000210046 370 ntBASIC1.28□□□□□ -2.2
Col1a1P11087 AC154271.1-201ENSMUST00000224780 383 ntBASIC1.28□□□□□ -2.2
Col1a1P11087 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC1.28□□□□□ -2.21
Col1a1P11087 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC1.27□□□□□ -2.21
Col1a1P11087 Gm15692-201ENSMUST00000152173 352 ntBASIC1.27□□□□□ -2.21
Col1a1P11087 Snora24-201ENSMUST00000174989 130 ntBASIC1.27□□□□□ -2.21
Col1a1P11087 Gm25247-201ENSMUST00000175475 90 ntBASIC1.27□□□□□ -2.21
Col1a1P11087 Gm27419-201ENSMUST00000184576 109 ntBASIC1.27□□□□□ -2.21
Col1a1P11087 Gm42454-201ENSMUST00000196805 1181 ntBASIC1.27□□□□□ -2.21
Col1a1P11087 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC1.27□□□□□ -2.21
Col1a1P11087 Gm43979-201ENSMUST00000203179 475 ntBASIC1.27□□□□□ -2.21
Col1a1P11087 Gm43978-201ENSMUST00000203491 451 ntBASIC1.27□□□□□ -2.21
Col1a1P11087 CT033785.1-201ENSMUST00000224872 272 ntBASIC1.27□□□□□ -2.21
Col1a1P11087 AC158521.1-201ENSMUST00000225295 660 ntBASIC1.27□□□□□ -2.21
Col1a1P11087 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC1.27□□□□□ -2.21
Col1a1P11087 Gm42536-201ENSMUST00000197562 1613 ntBASIC1.27□□□□□ -2.21
Col1a1P11087 Gm14651-201ENSMUST00000147192 442 ntBASIC1.26□□□□□ -2.21
Col1a1P11087 Gm22769-201ENSMUST00000158367 98 ntBASIC1.26□□□□□ -2.21
Col1a1P11087 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Col1a1P11087 Gm44295-201ENSMUST00000203805 437 ntBASIC1.26□□□□□ -2.21
Col1a1P11087 Gm18991-201ENSMUST00000209225 746 ntBASIC1.26□□□□□ -2.21
Col1a1P11087 Mir27b-201ENSMUST00000083541 73 ntBASIC1.26□□□□□ -2.21
Col1a1P11087 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC1.26□□□□□ -2.21
Col1a1P11087 AC124746.1-201ENSMUST00000227535 1300 ntBASIC1.26□□□□□ -2.21
Col1a1P11087 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.26□□□□□ -2.21
Col1a1P11087 Gm23126-201ENSMUST00000104260 134 ntBASIC1.25□□□□□ -2.21
Col1a1P11087 Gm22019-201ENSMUST00000104359 96 ntBASIC1.25□□□□□ -2.21
Col1a1P11087 Gm14670-201ENSMUST00000117327 337 ntBASIC1.25□□□□□ -2.21
Col1a1P11087 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC1.25□□□□□ -2.21
Col1a1P11087 Gm24959-201ENSMUST00000157924 146 ntBASIC1.25□□□□□ -2.21
Col1a1P11087 Gm25454-201ENSMUST00000157947 315 ntBASIC1.25□□□□□ -2.21
Col1a1P11087 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC1.25□□□□□ -2.21
Col1a1P11087 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC1.25□□□□□ -2.21
Col1a1P11087 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC1.25□□□□□ -2.21
Col1a1P11087 Gm29184-201ENSMUST00000190038 334 ntBASIC1.25□□□□□ -2.21
Col1a1P11087 Gm43407-201ENSMUST00000199816 317 ntBASIC1.25□□□□□ -2.21
Col1a1P11087 Gm44058-201ENSMUST00000204335 467 ntBASIC1.25□□□□□ -2.21
Col1a1P11087 Gm43865-201ENSMUST00000204721 127 ntBASIC1.25□□□□□ -2.21
Col1a1P11087 Gm18414-201ENSMUST00000210858 694 ntBASIC1.25□□□□□ -2.21
Col1a1P11087 Gm29809-201ENSMUST00000218423 493 ntBASIC1.25□□□□□ -2.21
Col1a1P11087 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
Col1a1P11087 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.25□□□□□ -2.21
Col1a1P11087 Gm24049-201ENSMUST00000102409 100 ntBASIC1.24□□□□□ -2.21
Col1a1P11087 Gm15067-201ENSMUST00000119534 156 ntBASIC1.24□□□□□ -2.21
Col1a1P11087 Gm11252-201ENSMUST00000120572 939 ntBASIC1.24□□□□□ -2.21
Col1a1P11087 U6.1-201ENSMUST00000157443 101 ntBASIC1.24□□□□□ -2.21
Col1a1P11087 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC1.24□□□□□ -2.21
Col1a1P11087 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC1.24□□□□□ -2.21
Col1a1P11087 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
Col1a1P11087 Gm44830-201ENSMUST00000207667 584 ntBASIC1.24□□□□□ -2.21
Col1a1P11087 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC1.24□□□□□ -2.21
Col1a1P11087 AC163357.1-201ENSMUST00000220847 233 ntBASIC1.24□□□□□ -2.21
Col1a1P11087 Gm18338-201ENSMUST00000222381 560 ntBASIC1.24□□□□□ -2.21
Col1a1P11087 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
Col1a1P11087 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Col1a1P11087 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
Col1a1P11087 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC1.24□□□□□ -2.21
Col1a1P11087 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
Col1a1P11087 Gm23435-201ENSMUST00000157183 156 ntBASIC1.24□□□□□ -2.21
Col1a1P11087 Gm25839-201ENSMUST00000158921 103 ntBASIC1.24□□□□□ -2.21
Col1a1P11087 Gm17204-201ENSMUST00000167936 478 ntBASIC1.24□□□□□ -2.21
Col1a1P11087 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC1.24□□□□□ -2.21
Col1a1P11087 Gm24304-201ENSMUST00000177635 107 ntBASIC1.24□□□□□ -2.21
Col1a1P11087 Gm45173-201ENSMUST00000206819 305 ntBASIC1.24□□□□□ -2.21
Col1a1P11087 AC133176.1-201ENSMUST00000226668 219 ntBASIC1.24□□□□□ -2.21
Col1a1P11087 Mir137-201ENSMUST00000083635 73 ntBASIC1.24□□□□□ -2.21
Col1a1P11087 Gm23846-201ENSMUST00000083835 107 ntBASIC1.24□□□□□ -2.21
Col1a1P11087 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
Col1a1P11087 Gm42968-201ENSMUST00000198578 1372 ntBASIC1.23□□□□□ -2.21
Col1a1P11087 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Col1a1P11087 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
Col1a1P11087 Gm13876-201ENSMUST00000118451 261 ntBASIC1.23□□□□□ -2.21
Col1a1P11087 Gm23120-201ENSMUST00000157654 287 ntBASIC1.23□□□□□ -2.21
Col1a1P11087 Gm22485-201ENSMUST00000157990 109 ntBASIC1.23□□□□□ -2.21
Col1a1P11087 Gm8207-201ENSMUST00000171204 502 ntBASIC1.23□□□□□ -2.21
Col1a1P11087 Gm5709-201ENSMUST00000177879 1165 ntBASIC1.23□□□□□ -2.21
Col1a1P11087 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC1.23□□□□□ -2.21
Col1a1P11087 AC155314.1-201ENSMUST00000227624 508 ntBASIC1.23□□□□□ -2.21
Col1a1P11087 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
Col1a1P11087 Igkv13-87-201ENSMUST00000114214 286 ntBASIC1.22□□□□□ -2.21
Col1a1P11087 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 97.4 ms