Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm29408-201ENSMUST00000187536 216 ntBASIC4.47□□□□□ -1.69
Clp1Q99LI9 Gm42451-201ENSMUST00000197410 244 ntBASIC4.47□□□□□ -1.69
Clp1Q99LI9 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Clp1Q99LI9 Gm42666-201ENSMUST00000201954 152 ntBASIC4.47□□□□□ -1.69
Clp1Q99LI9 Gm43978-201ENSMUST00000203491 451 ntBASIC4.47□□□□□ -1.69
Clp1Q99LI9 Gm44543-201ENSMUST00000209136 396 ntBASIC4.47□□□□□ -1.69
Clp1Q99LI9 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC4.47□□□□□ -1.69
Clp1Q99LI9 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Clp1Q99LI9 Mir34b-201ENSMUST00000083558 84 ntBASIC4.47□□□□□ -1.69
Clp1Q99LI9 Gm22868-201ENSMUST00000083955 164 ntBASIC4.47□□□□□ -1.69
Clp1Q99LI9 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Clp1Q99LI9 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
Clp1Q99LI9 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Clp1Q99LI9 Gm37296-201ENSMUST00000192728 2922 ntBASIC4.47□□□□□ -1.69
Clp1Q99LI9 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
Clp1Q99LI9 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Clp1Q99LI9 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Clp1Q99LI9 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Clp1Q99LI9 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Clp1Q99LI9 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Clp1Q99LI9 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC4.46□□□□□ -1.7
Clp1Q99LI9 Gm26418-201ENSMUST00000104275 137 ntBASIC4.46□□□□□ -1.7
Clp1Q99LI9 Gm24982-201ENSMUST00000104456 132 ntBASIC4.46□□□□□ -1.7
Clp1Q99LI9 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC4.46□□□□□ -1.7
Clp1Q99LI9 Gm12721-201ENSMUST00000120621 268 ntBASIC4.46□□□□□ -1.7
Clp1Q99LI9 Gm25107-201ENSMUST00000122472 129 ntBASIC4.46□□□□□ -1.7
Clp1Q99LI9 Gm25572-201ENSMUST00000157527 172 ntBASIC4.46□□□□□ -1.7
Clp1Q99LI9 Gm26186-201ENSMUST00000157689 125 ntBASIC4.46□□□□□ -1.7
Clp1Q99LI9 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Clp1Q99LI9 Gm27445-201ENSMUST00000184484 72 ntBASIC4.46□□□□□ -1.7
Clp1Q99LI9 Igkv8-31-201ENSMUST00000200040 372 ntBASIC4.46□□□□□ -1.7
Clp1Q99LI9 Igkv1-136-201ENSMUST00000200635 297 ntBASIC4.46□□□□□ -1.7
Clp1Q99LI9 Gm44520-201ENSMUST00000205447 802 ntBASIC4.46□□□□□ -1.7
Clp1Q99LI9 AC166358.4-201ENSMUST00000223030 105 ntBASIC4.46□□□□□ -1.7
Clp1Q99LI9 AC159252.1-201ENSMUST00000224450 553 ntBASIC4.46□□□□□ -1.7
Clp1Q99LI9 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
Clp1Q99LI9 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Clp1Q99LI9 Ankrd28-204ENSMUST00000227089 3522 ntBASIC4.46□□□□□ -1.7
Clp1Q99LI9 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC4.46□□□□□ -1.7
Clp1Q99LI9 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Clp1Q99LI9 Gm21037-201ENSMUST00000209086 2608 ntBASIC4.45□□□□□ -1.7
Clp1Q99LI9 Gm43870-201ENSMUST00000205102 4369 ntBASIC4.45□□□□□ -1.7
Clp1Q99LI9 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Clp1Q99LI9 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Clp1Q99LI9 Gm45517-201ENSMUST00000209973 2468 ntBASIC4.45□□□□□ -1.7
Clp1Q99LI9 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
Clp1Q99LI9 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Clp1Q99LI9 Gm14518-201ENSMUST00000117351 542 ntBASIC4.45□□□□□ -1.7
Clp1Q99LI9 Gm24402-201ENSMUST00000157873 91 ntBASIC4.45□□□□□ -1.7
Clp1Q99LI9 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Clp1Q99LI9 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Clp1Q99LI9 Gm28825-201ENSMUST00000186233 238 ntBASIC4.45□□□□□ -1.7
Clp1Q99LI9 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC4.45□□□□□ -1.7
Clp1Q99LI9 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC4.45□□□□□ -1.7
Clp1Q99LI9 AC155167.3-201ENSMUST00000226349 217 ntBASIC4.45□□□□□ -1.7
Clp1Q99LI9 Mir193a-201ENSMUST00000083461 66 ntBASIC4.45□□□□□ -1.7
Clp1Q99LI9 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Clp1Q99LI9 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Clp1Q99LI9 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Clp1Q99LI9 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
Clp1Q99LI9 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Clp1Q99LI9 Gm37006-201ENSMUST00000195253 2674 ntBASIC4.45□□□□□ -1.7
Clp1Q99LI9 Gm43829-201ENSMUST00000196191 3802 ntBASIC4.45□□□□□ -1.7
Clp1Q99LI9 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Clp1Q99LI9 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Clp1Q99LI9 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Clp1Q99LI9 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC4.44□□□□□ -1.7
Clp1Q99LI9 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Clp1Q99LI9 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Clp1Q99LI9 Gm38259-201ENSMUST00000194602 3534 ntBASIC4.44□□□□□ -1.7
Clp1Q99LI9 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Clp1Q99LI9 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Clp1Q99LI9 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC4.44□□□□□ -1.7
Clp1Q99LI9 Gm24282-201ENSMUST00000104232 66 ntBASIC4.44□□□□□ -1.7
Clp1Q99LI9 Gm26019-201ENSMUST00000104407 119 ntBASIC4.44□□□□□ -1.7
Clp1Q99LI9 Mir105-201ENSMUST00000104655 80 ntBASIC4.44□□□□□ -1.7
Clp1Q99LI9 Gm23841-201ENSMUST00000116951 114 ntBASIC4.44□□□□□ -1.7
Clp1Q99LI9 Gm12458-201ENSMUST00000119387 495 ntBASIC4.44□□□□□ -1.7
Clp1Q99LI9 Gm22984-201ENSMUST00000122751 122 ntBASIC4.44□□□□□ -1.7
Clp1Q99LI9 Gm26148-201ENSMUST00000157430 68 ntBASIC4.44□□□□□ -1.7
Clp1Q99LI9 Gm25454-201ENSMUST00000157947 315 ntBASIC4.44□□□□□ -1.7
Clp1Q99LI9 Gm22135-201ENSMUST00000158752 108 ntBASIC4.44□□□□□ -1.7
Clp1Q99LI9 Gm26287-201ENSMUST00000158887 81 ntBASIC4.44□□□□□ -1.7
Clp1Q99LI9 Gm28828-201ENSMUST00000186601 696 ntBASIC4.44□□□□□ -1.7
Clp1Q99LI9 Gm19123-201ENSMUST00000190716 651 ntBASIC4.44□□□□□ -1.7
Clp1Q99LI9 Gm37097-201ENSMUST00000193676 336 ntBASIC4.44□□□□□ -1.7
Clp1Q99LI9 Gm19620-201ENSMUST00000195972 434 ntBASIC4.44□□□□□ -1.7
Clp1Q99LI9 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC4.44□□□□□ -1.7
Clp1Q99LI9 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Clp1Q99LI9 Snord14d-201ENSMUST00000083424 86 ntBASIC4.44□□□□□ -1.7
Clp1Q99LI9 Mir208a-201ENSMUST00000083498 83 ntBASIC4.44□□□□□ -1.7
Clp1Q99LI9 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Clp1Q99LI9 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Clp1Q99LI9 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Clp1Q99LI9 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
Clp1Q99LI9 Gm43404-201ENSMUST00000200424 2534 ntBASIC4.43□□□□□ -1.7
Clp1Q99LI9 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Clp1Q99LI9 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC4.43□□□□□ -1.7
Clp1Q99LI9 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
Clp1Q99LI9 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 113.2 ms