Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Ushbp1Q8R370 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Ushbp1Q8R370 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
Ushbp1Q8R370 AC121844.2-201ENSMUST00000219067 2066 ntBASIC3.92□□□□□ -1.78
Ushbp1Q8R370 Gm23747-201ENSMUST00000104228 131 ntBASIC3.92□□□□□ -1.78
Ushbp1Q8R370 Gm16216-201ENSMUST00000118970 1111 ntBASIC3.92□□□□□ -1.78
Ushbp1Q8R370 Gm7327-201ENSMUST00000120925 652 ntBASIC3.92□□□□□ -1.78
Ushbp1Q8R370 Gm14810-201ENSMUST00000121628 486 ntBASIC3.92□□□□□ -1.78
Ushbp1Q8R370 Gm22073-201ENSMUST00000122668 189 ntBASIC3.92□□□□□ -1.78
Ushbp1Q8R370 Gm6956-201ENSMUST00000134724 546 ntBASIC3.92□□□□□ -1.78
Ushbp1Q8R370 Gm24138-201ENSMUST00000157572 114 ntBASIC3.92□□□□□ -1.78
Ushbp1Q8R370 Gm25860-201ENSMUST00000158252 126 ntBASIC3.92□□□□□ -1.78
Ushbp1Q8R370 Gm24930-201ENSMUST00000158315 83 ntBASIC3.92□□□□□ -1.78
Ushbp1Q8R370 Mir5624-201ENSMUST00000176635 61 ntBASIC3.92□□□□□ -1.78
Ushbp1Q8R370 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.92□□□□□ -1.78
Ushbp1Q8R370 Gm29429-201ENSMUST00000187071 121 ntBASIC3.92□□□□□ -1.78
Ushbp1Q8R370 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC3.92□□□□□ -1.78
Ushbp1Q8R370 Gm9696-202ENSMUST00000191541 830 ntBASIC3.92□□□□□ -1.78
Ushbp1Q8R370 Gm42832-201ENSMUST00000196361 745 ntBASIC3.92□□□□□ -1.78
Ushbp1Q8R370 Gm43510-201ENSMUST00000197922 353 ntBASIC3.92□□□□□ -1.78
Ushbp1Q8R370 Mir691-201ENSMUST00000199719 78 ntBASIC3.92□□□□□ -1.78
Ushbp1Q8R370 Gm44084-201ENSMUST00000203947 409 ntBASIC3.92□□□□□ -1.78
Ushbp1Q8R370 AC140785.1-201ENSMUST00000217782 383 ntBASIC3.92□□□□□ -1.78
Ushbp1Q8R370 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.92□□□□□ -1.78
Ushbp1Q8R370 Gm9765-201ENSMUST00000043170 321 ntBASIC3.92□□□□□ -1.78
Ushbp1Q8R370 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.92□□□□□ -1.78
Ushbp1Q8R370 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC3.92□□□□□ -1.78
Ushbp1Q8R370 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Ushbp1Q8R370 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Ushbp1Q8R370 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Ushbp1Q8R370 Gm42481-201ENSMUST00000196822 2178 ntBASIC3.92□□□□□ -1.78
Ushbp1Q8R370 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Ushbp1Q8R370 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Ushbp1Q8R370 Gm21032-201ENSMUST00000208108 2578 ntBASIC3.91□□□□□ -1.78
Ushbp1Q8R370 Gm38031-201ENSMUST00000191819 3015 ntBASIC3.91□□□□□ -1.78
Ushbp1Q8R370 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.91□□□□□ -1.78
Ushbp1Q8R370 Gm25943-201ENSMUST00000103791 90 ntBASIC3.91□□□□□ -1.78
Ushbp1Q8R370 Mir466b-7-201ENSMUST00000103804 88 ntBASIC3.91□□□□□ -1.78
Ushbp1Q8R370 Mir466b-5-201ENSMUST00000103900 88 ntBASIC3.91□□□□□ -1.78
Ushbp1Q8R370 Gm22023-201ENSMUST00000104354 130 ntBASIC3.91□□□□□ -1.78
Ushbp1Q8R370 Mir467g-201ENSMUST00000116906 120 ntBASIC3.91□□□□□ -1.78
Ushbp1Q8R370 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC3.91□□□□□ -1.78
Ushbp1Q8R370 Gm14518-201ENSMUST00000117351 542 ntBASIC3.91□□□□□ -1.78
Ushbp1Q8R370 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC3.91□□□□□ -1.78
Ushbp1Q8R370 Gm12191-201ENSMUST00000118307 348 ntBASIC3.91□□□□□ -1.78
Ushbp1Q8R370 Gm14119-201ENSMUST00000119511 235 ntBASIC3.91□□□□□ -1.78
Ushbp1Q8R370 Gm9703-201ENSMUST00000119573 343 ntBASIC3.91□□□□□ -1.78
Ushbp1Q8R370 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC3.91□□□□□ -1.78
Ushbp1Q8R370 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC3.91□□□□□ -1.78
Ushbp1Q8R370 Gm12779-201ENSMUST00000121496 143 ntBASIC3.91□□□□□ -1.78
Ushbp1Q8R370 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC3.91□□□□□ -1.78
Ushbp1Q8R370 Gm13901-201ENSMUST00000137252 468 ntBASIC3.91□□□□□ -1.78
Ushbp1Q8R370 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC3.91□□□□□ -1.78
Ushbp1Q8R370 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC3.91□□□□□ -1.78
Ushbp1Q8R370 Gm25519-201ENSMUST00000158392 127 ntBASIC3.91□□□□□ -1.78
Ushbp1Q8R370 Gm23775-201ENSMUST00000158991 249 ntBASIC3.91□□□□□ -1.78
Ushbp1Q8R370 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Ushbp1Q8R370 Mir466b-4-201ENSMUST00000178801 90 ntBASIC3.91□□□□□ -1.78
Ushbp1Q8R370 Gm25285-201ENSMUST00000178951 90 ntBASIC3.91□□□□□ -1.78
Ushbp1Q8R370 Mir466b-6-201ENSMUST00000180061 90 ntBASIC3.91□□□□□ -1.78
Ushbp1Q8R370 Mir466c-2-201ENSMUST00000180211 90 ntBASIC3.91□□□□□ -1.78
Ushbp1Q8R370 Gm37616-201ENSMUST00000193974 322 ntBASIC3.91□□□□□ -1.78
Ushbp1Q8R370 Gm43393-201ENSMUST00000200147 194 ntBASIC3.91□□□□□ -1.78
Ushbp1Q8R370 Gm44083-201ENSMUST00000203114 337 ntBASIC3.91□□□□□ -1.78
Ushbp1Q8R370 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.91□□□□□ -1.78
Ushbp1Q8R370 Gm44655-201ENSMUST00000207768 423 ntBASIC3.91□□□□□ -1.78
Ushbp1Q8R370 Gm45273-201ENSMUST00000211559 281 ntBASIC3.91□□□□□ -1.78
Ushbp1Q8R370 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC3.91□□□□□ -1.78
Ushbp1Q8R370 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.91□□□□□ -1.78
Ushbp1Q8R370 AC130222.1-201ENSMUST00000221198 256 ntBASIC3.91□□□□□ -1.78
Ushbp1Q8R370 AC158395.1-201ENSMUST00000227206 452 ntBASIC3.91□□□□□ -1.78
Ushbp1Q8R370 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC3.91□□□□□ -1.78
Ushbp1Q8R370 Gm10343-201ENSMUST00000096279 348 ntBASIC3.91□□□□□ -1.78
Ushbp1Q8R370 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Ushbp1Q8R370 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Ushbp1Q8R370 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.9□□□□□ -1.78
Ushbp1Q8R370 Gm26145-201ENSMUST00000104476 127 ntBASIC3.9□□□□□ -1.79
Ushbp1Q8R370 Gm26147-201ENSMUST00000104479 114 ntBASIC3.9□□□□□ -1.79
Ushbp1Q8R370 Gm23530-201ENSMUST00000104564 137 ntBASIC3.9□□□□□ -1.79
Ushbp1Q8R370 Gm12125-201ENSMUST00000117261 736 ntBASIC3.9□□□□□ -1.79
Ushbp1Q8R370 Gm13672-201ENSMUST00000117554 459 ntBASIC3.9□□□□□ -1.79
Ushbp1Q8R370 Gm5762-201ENSMUST00000119204 258 ntBASIC3.9□□□□□ -1.79
Ushbp1Q8R370 Gm13717-201ENSMUST00000119868 365 ntBASIC3.9□□□□□ -1.79
Ushbp1Q8R370 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC3.9□□□□□ -1.79
Ushbp1Q8R370 Gm23592-201ENSMUST00000157859 117 ntBASIC3.9□□□□□ -1.79
Ushbp1Q8R370 Gm24191-201ENSMUST00000157977 122 ntBASIC3.9□□□□□ -1.79
Ushbp1Q8R370 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Ushbp1Q8R370 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Ushbp1Q8R370 Gm17186-201ENSMUST00000171742 456 ntBASIC3.9□□□□□ -1.79
Ushbp1Q8R370 Gm25198-201ENSMUST00000178574 110 ntBASIC3.9□□□□□ -1.79
Ushbp1Q8R370 Gm24168-201ENSMUST00000178825 107 ntBASIC3.9□□□□□ -1.79
Ushbp1Q8R370 Gm22951-201ENSMUST00000179471 107 ntBASIC3.9□□□□□ -1.79
Ushbp1Q8R370 Gm9022-202ENSMUST00000183285 483 ntBASIC3.9□□□□□ -1.79
Ushbp1Q8R370 Gm29104-201ENSMUST00000186304 222 ntBASIC3.9□□□□□ -1.79
Ushbp1Q8R370 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC3.9□□□□□ -1.79
Ushbp1Q8R370 Gm43704-201ENSMUST00000196164 496 ntBASIC3.9□□□□□ -1.79
Ushbp1Q8R370 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC3.9□□□□□ -1.79
Ushbp1Q8R370 Gm44657-201ENSMUST00000208568 450 ntBASIC3.9□□□□□ -1.79
Ushbp1Q8R370 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.9□□□□□ -1.79
Ushbp1Q8R370 AC167229.1-201ENSMUST00000220057 469 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms