Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm25155-201ENSMUST00000178450 94 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Gm24760-201ENSMUST00000178530 94 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Gm26032-201ENSMUST00000178535 94 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Gm22285-201ENSMUST00000178576 94 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Gm22417-201ENSMUST00000178656 94 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Snord116l2-201ENSMUST00000178675 94 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Gm26270-201ENSMUST00000178690 94 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Snord116l16-201ENSMUST00000178777 94 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Gm25210-201ENSMUST00000178813 94 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Gm25157-201ENSMUST00000178914 94 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Gm23313-201ENSMUST00000178931 94 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Snord116l17-201ENSMUST00000178936 94 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Gm23089-201ENSMUST00000178947 94 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Gm22046-201ENSMUST00000179027 94 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Snord116l10-201ENSMUST00000179053 94 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Gm24153-201ENSMUST00000179280 94 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Gm25597-201ENSMUST00000179388 94 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Snord116l1-201ENSMUST00000179518 94 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Gm22941-201ENSMUST00000179630 94 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Gm25816-201ENSMUST00000179764 94 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Snord116l8-201ENSMUST00000179889 94 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Snord116l7-201ENSMUST00000179895 94 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Snord116l5-201ENSMUST00000179927 94 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Snord116l6-201ENSMUST00000179955 94 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Gm26188-201ENSMUST00000179963 94 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Gm25471-201ENSMUST00000180126 94 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Gm26433-201ENSMUST00000180227 94 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Snord116l11-201ENSMUST00000180312 94 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Gm23862-201ENSMUST00000180342 94 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Gm22128-201ENSMUST00000180346 94 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Gm18486-201ENSMUST00000184040 298 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Gm44336-201ENSMUST00000203696 468 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 AC158803.1-201ENSMUST00000219495 316 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 CT009718.4-201ENSMUST00000221881 109 ntBASIC3.83□□□□□ -1.8
Vps53Q8CCB4 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Vps53Q8CCB4 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
Vps53Q8CCB4 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
Vps53Q8CCB4 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC3.82□□□□□ -1.8
Vps53Q8CCB4 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Vps53Q8CCB4 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Vps53Q8CCB4 Gm25407-201ENSMUST00000104102 134 ntBASIC3.82□□□□□ -1.8
Vps53Q8CCB4 Mir291a-201ENSMUST00000104815 82 ntBASIC3.82□□□□□ -1.8
Vps53Q8CCB4 Gm7164-201ENSMUST00000117503 450 ntBASIC3.82□□□□□ -1.8
Vps53Q8CCB4 Gm13873-201ENSMUST00000119208 427 ntBASIC3.82□□□□□ -1.8
Vps53Q8CCB4 AA413626-201ENSMUST00000121125 494 ntBASIC3.82□□□□□ -1.8
Vps53Q8CCB4 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC3.82□□□□□ -1.8
Vps53Q8CCB4 Gm15147-201ENSMUST00000122263 483 ntBASIC3.82□□□□□ -1.8
Vps53Q8CCB4 Gm23183-201ENSMUST00000122595 323 ntBASIC3.82□□□□□ -1.8
Vps53Q8CCB4 Gm24061-201ENSMUST00000157489 120 ntBASIC3.82□□□□□ -1.8
Vps53Q8CCB4 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC3.82□□□□□ -1.8
Vps53Q8CCB4 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC3.82□□□□□ -1.8
Vps53Q8CCB4 Gm26195-201ENSMUST00000175035 101 ntBASIC3.82□□□□□ -1.8
Vps53Q8CCB4 Gm29350-201ENSMUST00000189141 541 ntBASIC3.82□□□□□ -1.8
Vps53Q8CCB4 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Vps53Q8CCB4 Gm45814-201ENSMUST00000212646 775 ntBASIC3.82□□□□□ -1.8
Vps53Q8CCB4 Gm9818-201ENSMUST00000050900 255 ntBASIC3.82□□□□□ -1.8
Vps53Q8CCB4 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
Vps53Q8CCB4 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Vps53Q8CCB4 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Vps53Q8CCB4 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Vps53Q8CCB4 n-R5s202-201ENSMUST00000104517 114 ntBASIC3.81□□□□□ -1.8
Vps53Q8CCB4 Gm13443-201ENSMUST00000120770 555 ntBASIC3.81□□□□□ -1.8
Vps53Q8CCB4 Gm15381-201ENSMUST00000121501 1156 ntBASIC3.81□□□□□ -1.8
Vps53Q8CCB4 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.81□□□□□ -1.8
Vps53Q8CCB4 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.81□□□□□ -1.8
Vps53Q8CCB4 Gm6059-201ENSMUST00000196903 340 ntBASIC3.81□□□□□ -1.8
Vps53Q8CCB4 Gm43239-201ENSMUST00000200131 201 ntBASIC3.81□□□□□ -1.8
Vps53Q8CCB4 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC3.81□□□□□ -1.8
Vps53Q8CCB4 Gm19252-201ENSMUST00000204705 305 ntBASIC3.81□□□□□ -1.8
Vps53Q8CCB4 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC3.81□□□□□ -1.8
Vps53Q8CCB4 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Vps53Q8CCB4 Gm26446-201ENSMUST00000082455 103 ntBASIC3.81□□□□□ -1.8
Vps53Q8CCB4 Gm23650-201ENSMUST00000083355 70 ntBASIC3.81□□□□□ -1.8
Vps53Q8CCB4 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Vps53Q8CCB4 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Vps53Q8CCB4 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Vps53Q8CCB4 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
Vps53Q8CCB4 Mir669g-201ENSMUST00000116809 123 ntBASIC3.8□□□□□ -1.8
Vps53Q8CCB4 Gm14287-201ENSMUST00000121060 117 ntBASIC3.8□□□□□ -1.8
Vps53Q8CCB4 Gm23716-201ENSMUST00000157348 144 ntBASIC3.8□□□□□ -1.8
Vps53Q8CCB4 Gm17162-201ENSMUST00000168538 473 ntBASIC3.8□□□□□ -1.8
Vps53Q8CCB4 Gm22910-201ENSMUST00000178568 132 ntBASIC3.8□□□□□ -1.8
Vps53Q8CCB4 Gm28058-201ENSMUST00000186421 264 ntBASIC3.8□□□□□ -1.8
Vps53Q8CCB4 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.8□□□□□ -1.8
Vps53Q8CCB4 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC3.8□□□□□ -1.8
Vps53Q8CCB4 Gm37085-201ENSMUST00000193780 196 ntBASIC3.8□□□□□ -1.8
Vps53Q8CCB4 Mir691-201ENSMUST00000199719 78 ntBASIC3.8□□□□□ -1.8
Vps53Q8CCB4 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC3.8□□□□□ -1.8
Vps53Q8CCB4 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.8□□□□□ -1.8
Vps53Q8CCB4 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 100.7 ms