Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Gm23645-201ENSMUST00000083228 108 ntBASIC2.16□□□□□ -2.06
Trav8d-2Q5R1B6 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Trav8d-2Q5R1B6 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.16□□□□□ -2.06
Trav8d-2Q5R1B6 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Trav8d-2Q5R1B6 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Trav8d-2Q5R1B6 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Trav8d-2Q5R1B6 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.16□□□□□ -2.06
Trav8d-2Q5R1B6 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
Trav8d-2Q5R1B6 AC162910.1-201ENSMUST00000221219 1723 ntBASIC2.15□□□□□ -2.07
Trav8d-2Q5R1B6 Gm5596-201ENSMUST00000207988 2421 ntBASIC2.15□□□□□ -2.07
Trav8d-2Q5R1B6 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.15□□□□□ -2.07
Trav8d-2Q5R1B6 Gm25088-201ENSMUST00000101803 79 ntBASIC2.15□□□□□ -2.07
Trav8d-2Q5R1B6 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Trav8d-2Q5R1B6 Gm26473-201ENSMUST00000116763 127 ntBASIC2.15□□□□□ -2.07
Trav8d-2Q5R1B6 Gm22072-201ENSMUST00000116850 121 ntBASIC2.15□□□□□ -2.07
Trav8d-2Q5R1B6 Gm24907-201ENSMUST00000116932 128 ntBASIC2.15□□□□□ -2.07
Trav8d-2Q5R1B6 Gm14877-201ENSMUST00000119803 478 ntBASIC2.15□□□□□ -2.07
Trav8d-2Q5R1B6 Gm12044-201ENSMUST00000120335 213 ntBASIC2.15□□□□□ -2.07
Trav8d-2Q5R1B6 Gm14402-201ENSMUST00000122217 508 ntBASIC2.15□□□□□ -2.07
Trav8d-2Q5R1B6 Gm14629-201ENSMUST00000122428 144 ntBASIC2.15□□□□□ -2.07
Trav8d-2Q5R1B6 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC2.15□□□□□ -2.07
Trav8d-2Q5R1B6 Gm24237-201ENSMUST00000157790 132 ntBASIC2.15□□□□□ -2.07
Trav8d-2Q5R1B6 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC2.15□□□□□ -2.07
Trav8d-2Q5R1B6 Gm25470-201ENSMUST00000175576 111 ntBASIC2.15□□□□□ -2.07
Trav8d-2Q5R1B6 Zfp950-206ENSMUST00000178819 171 ntBASIC2.15□□□□□ -2.07
Trav8d-2Q5R1B6 Gm24137-201ENSMUST00000180055 79 ntBASIC2.15□□□□□ -2.07
Trav8d-2Q5R1B6 Gm22391-201ENSMUST00000180356 79 ntBASIC2.15□□□□□ -2.07
Trav8d-2Q5R1B6 Gm5224-201ENSMUST00000183060 350 ntBASIC2.15□□□□□ -2.07
Trav8d-2Q5R1B6 Mir8116-201ENSMUST00000184134 97 ntBASIC2.15□□□□□ -2.07
Trav8d-2Q5R1B6 Gm28283-201ENSMUST00000185509 178 ntBASIC2.15□□□□□ -2.07
Trav8d-2Q5R1B6 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC2.15□□□□□ -2.07
Trav8d-2Q5R1B6 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC2.15□□□□□ -2.07
Trav8d-2Q5R1B6 Gm19089-201ENSMUST00000197207 613 ntBASIC2.15□□□□□ -2.07
Trav8d-2Q5R1B6 Gm18635-201ENSMUST00000199020 1060 ntBASIC2.15□□□□□ -2.07
Trav8d-2Q5R1B6 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Trav8d-2Q5R1B6 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC2.15□□□□□ -2.07
Trav8d-2Q5R1B6 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC2.15□□□□□ -2.07
Trav8d-2Q5R1B6 Gm43901-201ENSMUST00000203247 453 ntBASIC2.15□□□□□ -2.07
Trav8d-2Q5R1B6 Gm18691-201ENSMUST00000203593 872 ntBASIC2.15□□□□□ -2.07
Trav8d-2Q5R1B6 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC2.15□□□□□ -2.07
Trav8d-2Q5R1B6 AC123803.1-201ENSMUST00000216093 189 ntBASIC2.15□□□□□ -2.07
Trav8d-2Q5R1B6 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.15□□□□□ -2.07
Trav8d-2Q5R1B6 CT009550.5-201ENSMUST00000226286 382 ntBASIC2.15□□□□□ -2.07
Trav8d-2Q5R1B6 AC123656.2-201ENSMUST00000226726 227 ntBASIC2.15□□□□□ -2.07
Trav8d-2Q5R1B6 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Trav8d-2Q5R1B6 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Trav8d-2Q5R1B6 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC2.15□□□□□ -2.07
Trav8d-2Q5R1B6 Gm23848-201ENSMUST00000083826 106 ntBASIC2.15□□□□□ -2.07
Trav8d-2Q5R1B6 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC2.15□□□□□ -2.07
Trav8d-2Q5R1B6 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.15□□□□□ -2.07
Trav8d-2Q5R1B6 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Trav8d-2Q5R1B6 Mir542-201ENSMUST00000102186 85 ntBASIC2.14□□□□□ -2.07
Trav8d-2Q5R1B6 Gm24126-201ENSMUST00000104111 106 ntBASIC2.14□□□□□ -2.07
Trav8d-2Q5R1B6 Gm22496-201ENSMUST00000104493 88 ntBASIC2.14□□□□□ -2.07
Trav8d-2Q5R1B6 Gm14868-201ENSMUST00000117840 216 ntBASIC2.14□□□□□ -2.07
Trav8d-2Q5R1B6 Gm14841-201ENSMUST00000121067 758 ntBASIC2.14□□□□□ -2.07
Trav8d-2Q5R1B6 Gm23111-201ENSMUST00000122652 105 ntBASIC2.14□□□□□ -2.07
Trav8d-2Q5R1B6 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC2.14□□□□□ -2.07
Trav8d-2Q5R1B6 Gm23470-201ENSMUST00000157129 120 ntBASIC2.14□□□□□ -2.07
Trav8d-2Q5R1B6 Gm26186-201ENSMUST00000157689 125 ntBASIC2.14□□□□□ -2.07
Trav8d-2Q5R1B6 Gm23043-201ENSMUST00000157890 109 ntBASIC2.14□□□□□ -2.07
Trav8d-2Q5R1B6 Gm24900-201ENSMUST00000158128 134 ntBASIC2.14□□□□□ -2.07
Trav8d-2Q5R1B6 Gm26271-201ENSMUST00000158349 104 ntBASIC2.14□□□□□ -2.07
Trav8d-2Q5R1B6 Gm24768-201ENSMUST00000158512 94 ntBASIC2.14□□□□□ -2.07
Trav8d-2Q5R1B6 Gm25365-201ENSMUST00000158852 121 ntBASIC2.14□□□□□ -2.07
Trav8d-2Q5R1B6 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.14□□□□□ -2.07
Trav8d-2Q5R1B6 Gm16588-201ENSMUST00000162889 355 ntBASIC2.14□□□□□ -2.07
Trav8d-2Q5R1B6 Gm17377-201ENSMUST00000165184 207 ntBASIC2.14□□□□□ -2.07
Trav8d-2Q5R1B6 Ear-ps4-201ENSMUST00000166834 450 ntBASIC2.14□□□□□ -2.07
Trav8d-2Q5R1B6 Gm22858-201ENSMUST00000174972 76 ntBASIC2.14□□□□□ -2.07
Trav8d-2Q5R1B6 Gm25175-201ENSMUST00000178712 79 ntBASIC2.14□□□□□ -2.07
Trav8d-2Q5R1B6 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC2.14□□□□□ -2.07
Trav8d-2Q5R1B6 Gm5268-201ENSMUST00000189212 940 ntBASIC2.14□□□□□ -2.07
Trav8d-2Q5R1B6 Igkv4-65-201ENSMUST00000196986 358 ntBASIC2.14□□□□□ -2.07
Trav8d-2Q5R1B6 Gm43171-201ENSMUST00000199882 291 ntBASIC2.14□□□□□ -2.07
Trav8d-2Q5R1B6 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC2.14□□□□□ -2.07
Trav8d-2Q5R1B6 AC137902.2-201ENSMUST00000227989 576 ntBASIC2.14□□□□□ -2.07
Trav8d-2Q5R1B6 AC131029.2-202ENSMUST00000228430 496 ntBASIC2.14□□□□□ -2.07
Trav8d-2Q5R1B6 Gm26922-201ENSMUST00000082687 72 ntBASIC2.14□□□□□ -2.07
Trav8d-2Q5R1B6 Gm22974-201ENSMUST00000083301 103 ntBASIC2.14□□□□□ -2.07
Trav8d-2Q5R1B6 Mir16-2-201ENSMUST00000083672 95 ntBASIC2.14□□□□□ -2.07
Trav8d-2Q5R1B6 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Trav8d-2Q5R1B6 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Trav8d-2Q5R1B6 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Trav8d-2Q5R1B6 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Trav8d-2Q5R1B6 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
Trav8d-2Q5R1B6 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC2.13□□□□□ -2.07
Trav8d-2Q5R1B6 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
Trav8d-2Q5R1B6 Gm26377-201ENSMUST00000102184 108 ntBASIC2.13□□□□□ -2.07
Trav8d-2Q5R1B6 Gm23109-201ENSMUST00000116867 126 ntBASIC2.13□□□□□ -2.07
Trav8d-2Q5R1B6 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC2.13□□□□□ -2.07
Trav8d-2Q5R1B6 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC2.13□□□□□ -2.07
Trav8d-2Q5R1B6 Gm24198-201ENSMUST00000157812 108 ntBASIC2.13□□□□□ -2.07
Trav8d-2Q5R1B6 Gm24053-201ENSMUST00000158620 105 ntBASIC2.13□□□□□ -2.07
Trav8d-2Q5R1B6 Gm8338-201ENSMUST00000163928 363 ntBASIC2.13□□□□□ -2.07
Trav8d-2Q5R1B6 Mir3964-201ENSMUST00000174898 74 ntBASIC2.13□□□□□ -2.07
Trav8d-2Q5R1B6 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC2.13□□□□□ -2.07
Trav8d-2Q5R1B6 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Trav8d-2Q5R1B6 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Trav8d-2Q5R1B6 Gm23190-201ENSMUST00000180307 64 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 95.5 ms