Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm11890-201ENSMUST00000119585 417 ntBASIC4.85□□□□□ -1.63
Col17a1Q07563 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC4.85□□□□□ -1.63
Col17a1Q07563 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Col17a1Q07563 Gm22259-201ENSMUST00000178926 107 ntBASIC4.85□□□□□ -1.63
Col17a1Q07563 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC4.85□□□□□ -1.63
Col17a1Q07563 AC117656.1-201ENSMUST00000225826 339 ntBASIC4.85□□□□□ -1.63
Col17a1Q07563 AL627387.1-201ENSMUST00000226063 250 ntBASIC4.85□□□□□ -1.63
Col17a1Q07563 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Col17a1Q07563 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
Col17a1Q07563 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Col17a1Q07563 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
Col17a1Q07563 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
Col17a1Q07563 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC4.84□□□□□ -1.63
Col17a1Q07563 Gm14838-201ENSMUST00000118913 248 ntBASIC4.84□□□□□ -1.63
Col17a1Q07563 Mup-ps21-201ENSMUST00000119998 448 ntBASIC4.84□□□□□ -1.63
Col17a1Q07563 Gm25362-201ENSMUST00000158854 105 ntBASIC4.84□□□□□ -1.63
Col17a1Q07563 Gm28974-201ENSMUST00000187893 231 ntBASIC4.84□□□□□ -1.63
Col17a1Q07563 Gm37377-201ENSMUST00000191733 304 ntBASIC4.84□□□□□ -1.63
Col17a1Q07563 Gm45742-201ENSMUST00000212400 433 ntBASIC4.84□□□□□ -1.63
Col17a1Q07563 AL450317.1-201ENSMUST00000213941 291 ntBASIC4.84□□□□□ -1.63
Col17a1Q07563 CT030166.2-201ENSMUST00000222021 368 ntBASIC4.84□□□□□ -1.63
Col17a1Q07563 AC173482.5-201ENSMUST00000224181 327 ntBASIC4.84□□□□□ -1.63
Col17a1Q07563 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Col17a1Q07563 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Col17a1Q07563 Gm43886-201ENSMUST00000205039 2386 ntBASIC4.84□□□□□ -1.63
Col17a1Q07563 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.64
Col17a1Q07563 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.64
Col17a1Q07563 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Col17a1Q07563 AC091683.1-201ENSMUST00000222307 2446 ntBASIC4.84□□□□□ -1.64
Col17a1Q07563 AC164297.1-201ENSMUST00000224484 1561 ntBASIC4.84□□□□□ -1.64
Col17a1Q07563 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Col17a1Q07563 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Col17a1Q07563 Gm13155-201ENSMUST00000119277 646 ntBASIC4.83□□□□□ -1.64
Col17a1Q07563 Gm8178-201ENSMUST00000121570 646 ntBASIC4.83□□□□□ -1.64
Col17a1Q07563 Gm25784-201ENSMUST00000122524 81 ntBASIC4.83□□□□□ -1.64
Col17a1Q07563 Gm25339-201ENSMUST00000157458 232 ntBASIC4.83□□□□□ -1.64
Col17a1Q07563 Gm24720-201ENSMUST00000157518 166 ntBASIC4.83□□□□□ -1.64
Col17a1Q07563 Gm23191-201ENSMUST00000179147 107 ntBASIC4.83□□□□□ -1.64
Col17a1Q07563 Gm45049-201ENSMUST00000207586 591 ntBASIC4.83□□□□□ -1.64
Col17a1Q07563 Gm6796-201ENSMUST00000211919 243 ntBASIC4.83□□□□□ -1.64
Col17a1Q07563 CT485612.2-201ENSMUST00000223014 151 ntBASIC4.83□□□□□ -1.64
Col17a1Q07563 AC105407.3-201ENSMUST00000224161 648 ntBASIC4.83□□□□□ -1.64
Col17a1Q07563 AC170086.1-201ENSMUST00000225190 497 ntBASIC4.83□□□□□ -1.64
Col17a1Q07563 CT025157.1-201ENSMUST00000226241 292 ntBASIC4.83□□□□□ -1.64
Col17a1Q07563 AC133156.1-202ENSMUST00000227284 363 ntBASIC4.83□□□□□ -1.64
Col17a1Q07563 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Col17a1Q07563 Gm22828-201ENSMUST00000083768 107 ntBASIC4.83□□□□□ -1.64
Col17a1Q07563 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
Col17a1Q07563 CT030170.3-201ENSMUST00000221205 1815 ntBASIC4.83□□□□□ -1.64
Col17a1Q07563 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Col17a1Q07563 Gm42927-201ENSMUST00000200624 3841 ntBASIC4.83□□□□□ -1.64
Col17a1Q07563 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
Col17a1Q07563 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Col17a1Q07563 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Col17a1Q07563 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Col17a1Q07563 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Col17a1Q07563 Gm14559-201ENSMUST00000121745 496 ntBASIC4.82□□□□□ -1.64
Col17a1Q07563 Gm23901-201ENSMUST00000157570 107 ntBASIC4.82□□□□□ -1.64
Col17a1Q07563 Gm22084-201ENSMUST00000157585 105 ntBASIC4.82□□□□□ -1.64
Col17a1Q07563 Gm24601-201ENSMUST00000157970 143 ntBASIC4.82□□□□□ -1.64
Col17a1Q07563 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col17a1Q07563 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Col17a1Q07563 Gm21809-201ENSMUST00000178495 468 ntBASIC4.82□□□□□ -1.64
Col17a1Q07563 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC4.82□□□□□ -1.64
Col17a1Q07563 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC4.82□□□□□ -1.64
Col17a1Q07563 Gm44083-201ENSMUST00000203114 337 ntBASIC4.82□□□□□ -1.64
Col17a1Q07563 Gm44609-201ENSMUST00000207157 460 ntBASIC4.82□□□□□ -1.64
Col17a1Q07563 AC154552.1-201ENSMUST00000222969 202 ntBASIC4.82□□□□□ -1.64
Col17a1Q07563 AC154270.1-201ENSMUST00000227226 426 ntBASIC4.82□□□□□ -1.64
Col17a1Q07563 Gm25699-201ENSMUST00000082896 167 ntBASIC4.82□□□□□ -1.64
Col17a1Q07563 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Col17a1Q07563 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col17a1Q07563 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Col17a1Q07563 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Col17a1Q07563 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Col17a1Q07563 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col17a1Q07563 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col17a1Q07563 Gm22834-201ENSMUST00000102021 79 ntBASIC4.81□□□□□ -1.64
Col17a1Q07563 Gm23551-201ENSMUST00000116852 121 ntBASIC4.81□□□□□ -1.64
Col17a1Q07563 Gm12053-201ENSMUST00000119022 252 ntBASIC4.81□□□□□ -1.64
Col17a1Q07563 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC4.81□□□□□ -1.64
Col17a1Q07563 Gm25967-201ENSMUST00000157168 147 ntBASIC4.81□□□□□ -1.64
Col17a1Q07563 Gm25194-201ENSMUST00000177987 79 ntBASIC4.81□□□□□ -1.64
Col17a1Q07563 Gm26189-201ENSMUST00000179879 107 ntBASIC4.81□□□□□ -1.64
Col17a1Q07563 Gm6501-201ENSMUST00000187178 916 ntBASIC4.81□□□□□ -1.64
Col17a1Q07563 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC4.81□□□□□ -1.64
Col17a1Q07563 Gm44336-201ENSMUST00000203696 468 ntBASIC4.81□□□□□ -1.64
Col17a1Q07563 Gm44634-201ENSMUST00000206119 152 ntBASIC4.81□□□□□ -1.64
Col17a1Q07563 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Col17a1Q07563 Gm45590-201ENSMUST00000209715 262 ntBASIC4.81□□□□□ -1.64
Col17a1Q07563 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC4.81□□□□□ -1.64
Col17a1Q07563 Gm24207-201ENSMUST00000082781 108 ntBASIC4.81□□□□□ -1.64
Col17a1Q07563 Mir127-201ENSMUST00000093568 70 ntBASIC4.81□□□□□ -1.64
Col17a1Q07563 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Col17a1Q07563 Gm18337-201ENSMUST00000219023 5762 ntBASIC4.81□□□□□ -1.64
Col17a1Q07563 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Col17a1Q07563 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col17a1Q07563 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
Col17a1Q07563 Gm43668-201ENSMUST00000197014 5342 ntBASIC4.81□□□□□ -1.64
Col17a1Q07563 Gm18609-201ENSMUST00000203370 3601 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 118.9 ms