Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm19123-201ENSMUST00000190716 651 ntBASIC4.45□□□□□ -1.7
Col6a1Q04857 Gm7652-201ENSMUST00000200440 1151 ntBASIC4.45□□□□□ -1.7
Col6a1Q04857 Gm34091-201ENSMUST00000200875 604 ntBASIC4.45□□□□□ -1.7
Col6a1Q04857 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC4.45□□□□□ -1.7
Col6a1Q04857 Gm19366-201ENSMUST00000206996 156 ntBASIC4.45□□□□□ -1.7
Col6a1Q04857 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC4.45□□□□□ -1.7
Col6a1Q04857 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Col6a1Q04857 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
Col6a1Q04857 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Col6a1Q04857 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
Col6a1Q04857 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Col6a1Q04857 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Col6a1Q04857 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Col6a1Q04857 Gm42768-201ENSMUST00000197734 2897 ntBASIC4.44□□□□□ -1.7
Col6a1Q04857 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Col6a1Q04857 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Col6a1Q04857 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Col6a1Q04857 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Col6a1Q04857 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Col6a1Q04857 Gm24671-201ENSMUST00000104159 158 ntBASIC4.44□□□□□ -1.7
Col6a1Q04857 Gm25915-201ENSMUST00000104265 126 ntBASIC4.44□□□□□ -1.7
Col6a1Q04857 Gm22496-201ENSMUST00000104493 88 ntBASIC4.44□□□□□ -1.7
Col6a1Q04857 Gm23232-201ENSMUST00000157300 105 ntBASIC4.44□□□□□ -1.7
Col6a1Q04857 Gm22135-201ENSMUST00000158752 108 ntBASIC4.44□□□□□ -1.7
Col6a1Q04857 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Col6a1Q04857 Gm3370-201ENSMUST00000171785 500 ntBASIC4.44□□□□□ -1.7
Col6a1Q04857 Mir5129-201ENSMUST00000174938 78 ntBASIC4.44□□□□□ -1.7
Col6a1Q04857 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC4.44□□□□□ -1.7
Col6a1Q04857 Gm24487-201ENSMUST00000178017 63 ntBASIC4.44□□□□□ -1.7
Col6a1Q04857 Gm25175-201ENSMUST00000178712 79 ntBASIC4.44□□□□□ -1.7
Col6a1Q04857 Gm25450-201ENSMUST00000179144 107 ntBASIC4.44□□□□□ -1.7
Col6a1Q04857 Gm25121-201ENSMUST00000179846 79 ntBASIC4.44□□□□□ -1.7
Col6a1Q04857 Gm27718-201ENSMUST00000183721 86 ntBASIC4.44□□□□□ -1.7
Col6a1Q04857 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC4.44□□□□□ -1.7
Col6a1Q04857 Gm28500-201ENSMUST00000190286 151 ntBASIC4.44□□□□□ -1.7
Col6a1Q04857 Gm36964-201ENSMUST00000191876 198 ntBASIC4.44□□□□□ -1.7
Col6a1Q04857 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC4.44□□□□□ -1.7
Col6a1Q04857 Gm44208-201ENSMUST00000205199 421 ntBASIC4.44□□□□□ -1.7
Col6a1Q04857 Gm45380-201ENSMUST00000210465 315 ntBASIC4.44□□□□□ -1.7
Col6a1Q04857 Gm45273-201ENSMUST00000211559 281 ntBASIC4.44□□□□□ -1.7
Col6a1Q04857 AC159709.1-201ENSMUST00000220445 349 ntBASIC4.44□□□□□ -1.7
Col6a1Q04857 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC4.44□□□□□ -1.7
Col6a1Q04857 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC4.44□□□□□ -1.7
Col6a1Q04857 Gm17752-201ENSMUST00000185787 3726 ntBASIC4.44□□□□□ -1.7
Col6a1Q04857 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC4.44□□□□□ -1.7
Col6a1Q04857 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Col6a1Q04857 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Col6a1Q04857 Svet1-201ENSMUST00000209370 3940 ntBASIC4.43□□□□□ -1.7
Col6a1Q04857 AC167420.1-201ENSMUST00000222999 2121 ntBASIC4.43□□□□□ -1.7
Col6a1Q04857 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Col6a1Q04857 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Col6a1Q04857 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Col6a1Q04857 Gm4736-201ENSMUST00000100870 380 ntBASIC4.43□□□□□ -1.7
Col6a1Q04857 Gm13268-201ENSMUST00000117485 433 ntBASIC4.43□□□□□ -1.7
Col6a1Q04857 Gm13457-201ENSMUST00000117885 267 ntBASIC4.43□□□□□ -1.7
Col6a1Q04857 Gm13541-201ENSMUST00000119519 283 ntBASIC4.43□□□□□ -1.7
Col6a1Q04857 Gm26186-201ENSMUST00000157689 125 ntBASIC4.43□□□□□ -1.7
Col6a1Q04857 Gm22889-201ENSMUST00000158639 58 ntBASIC4.43□□□□□ -1.7
Col6a1Q04857 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Col6a1Q04857 Gm22398-201ENSMUST00000174941 125 ntBASIC4.43□□□□□ -1.7
Col6a1Q04857 Gm25731-201ENSMUST00000175167 125 ntBASIC4.43□□□□□ -1.7
Col6a1Q04857 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC4.43□□□□□ -1.7
Col6a1Q04857 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC4.43□□□□□ -1.7
Col6a1Q04857 Gm29429-201ENSMUST00000187071 121 ntBASIC4.43□□□□□ -1.7
Col6a1Q04857 Gm28849-201ENSMUST00000188127 174 ntBASIC4.43□□□□□ -1.7
Col6a1Q04857 Gm28330-201ENSMUST00000190353 171 ntBASIC4.43□□□□□ -1.7
Col6a1Q04857 Gm36259-201ENSMUST00000197340 392 ntBASIC4.43□□□□□ -1.7
Col6a1Q04857 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC4.43□□□□□ -1.7
Col6a1Q04857 Gm43583-201ENSMUST00000199235 303 ntBASIC4.43□□□□□ -1.7
Col6a1Q04857 Gm6615-201ENSMUST00000199426 631 ntBASIC4.43□□□□□ -1.7
Col6a1Q04857 Gm43600-201ENSMUST00000202134 223 ntBASIC4.43□□□□□ -1.7
Col6a1Q04857 AC152062.1-201ENSMUST00000218129 386 ntBASIC4.43□□□□□ -1.7
Col6a1Q04857 AC091783.5-201ENSMUST00000224928 671 ntBASIC4.43□□□□□ -1.7
Col6a1Q04857 AC158395.1-201ENSMUST00000227206 452 ntBASIC4.43□□□□□ -1.7
Col6a1Q04857 AC123860.1-201ENSMUST00000228033 481 ntBASIC4.43□□□□□ -1.7
Col6a1Q04857 Gm23625-201ENSMUST00000082457 100 ntBASIC4.43□□□□□ -1.7
Col6a1Q04857 n-R5s182-201ENSMUST00000083889 107 ntBASIC4.43□□□□□ -1.7
Col6a1Q04857 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Col6a1Q04857 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Col6a1Q04857 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Col6a1Q04857 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC4.43□□□□□ -1.7
Col6a1Q04857 Gm37742-201ENSMUST00000193263 3979 ntBASIC4.43□□□□□ -1.7
Col6a1Q04857 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.43□□□□□ -1.7
Col6a1Q04857 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Col6a1Q04857 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Col6a1Q04857 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC4.43□□□□□ -1.7
Col6a1Q04857 Gm38240-201ENSMUST00000195110 2487 ntBASIC4.43□□□□□ -1.7
Col6a1Q04857 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Col6a1Q04857 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Col6a1Q04857 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Col6a1Q04857 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC4.42□□□□□ -1.7
Col6a1Q04857 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC4.42□□□□□ -1.7
Col6a1Q04857 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Col6a1Q04857 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Col6a1Q04857 Gm12125-201ENSMUST00000117261 736 ntBASIC4.42□□□□□ -1.7
Col6a1Q04857 Gm14586-201ENSMUST00000119571 408 ntBASIC4.42□□□□□ -1.7
Col6a1Q04857 Gm13729-201ENSMUST00000120328 406 ntBASIC4.42□□□□□ -1.7
Col6a1Q04857 Gm12276-201ENSMUST00000121709 301 ntBASIC4.42□□□□□ -1.7
Col6a1Q04857 2210418O10Rik-202ENSMUST00000135430 195 ntTSL 5 BASIC4.42□□□□□ -1.7
Col6a1Q04857 Gm25054-201ENSMUST00000157370 97 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms