Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm23209-201ENSMUST00000158667 110 ntBASIC4.28□□□□□ -1.72
Sox1P53783 Gm25835-201ENSMUST00000158917 144 ntBASIC4.28□□□□□ -1.72
Sox1P53783 Gm22450-201ENSMUST00000179641 107 ntBASIC4.28□□□□□ -1.72
Sox1P53783 Gm25024-201ENSMUST00000179667 104 ntBASIC4.28□□□□□ -1.72
Sox1P53783 Gm23966-201ENSMUST00000179823 107 ntBASIC4.28□□□□□ -1.72
Sox1P53783 Gm25473-201ENSMUST00000180191 107 ntBASIC4.28□□□□□ -1.72
Sox1P53783 Mir6540-201ENSMUST00000184886 108 ntBASIC4.28□□□□□ -1.72
Sox1P53783 AC154636.2-201ENSMUST00000222538 161 ntBASIC4.28□□□□□ -1.72
Sox1P53783 Gm9818-201ENSMUST00000050900 255 ntBASIC4.28□□□□□ -1.72
Sox1P53783 Gm23517-201ENSMUST00000082830 192 ntBASIC4.28□□□□□ -1.72
Sox1P53783 Gm26071-201ENSMUST00000083261 107 ntBASIC4.28□□□□□ -1.72
Sox1P53783 Gm24521-201ENSMUST00000083958 107 ntBASIC4.28□□□□□ -1.72
Sox1P53783 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Sox1P53783 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
Sox1P53783 Gm42768-201ENSMUST00000197734 2897 ntBASIC4.28□□□□□ -1.72
Sox1P53783 Gm42583-201ENSMUST00000202678 6700 ntBASIC4.28□□□□□ -1.72
Sox1P53783 Gm43047-201ENSMUST00000200089 3460 ntBASIC4.28□□□□□ -1.72
Sox1P53783 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Sox1P53783 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Sox1P53783 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
Sox1P53783 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.73
Sox1P53783 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
Sox1P53783 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Sox1P53783 Gm42659-201ENSMUST00000196955 1754 ntBASIC4.27□□□□□ -1.73
Sox1P53783 Gm43185-201ENSMUST00000197507 2775 ntBASIC4.27□□□□□ -1.73
Sox1P53783 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC4.27□□□□□ -1.73
Sox1P53783 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Sox1P53783 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Sox1P53783 Gm13343-201ENSMUST00000116474 105 ntBASIC4.27□□□□□ -1.73
Sox1P53783 Gm13268-201ENSMUST00000117485 433 ntBASIC4.27□□□□□ -1.73
Sox1P53783 Gm13076-201ENSMUST00000118041 204 ntBASIC4.27□□□□□ -1.73
Sox1P53783 Gm22321-201ENSMUST00000157152 104 ntBASIC4.27□□□□□ -1.73
Sox1P53783 Gm26088-201ENSMUST00000157896 131 ntBASIC4.27□□□□□ -1.73
Sox1P53783 Gm24106-201ENSMUST00000175498 127 ntBASIC4.27□□□□□ -1.73
Sox1P53783 Gm23002-201ENSMUST00000179221 107 ntBASIC4.27□□□□□ -1.73
Sox1P53783 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC4.27□□□□□ -1.73
Sox1P53783 Gm24949-201ENSMUST00000183609 215 ntBASIC4.27□□□□□ -1.73
Sox1P53783 Gm5329-201ENSMUST00000186898 463 ntBASIC4.27□□□□□ -1.73
Sox1P53783 Gm37624-201ENSMUST00000193751 219 ntBASIC4.27□□□□□ -1.73
Sox1P53783 Gm6842-201ENSMUST00000211361 390 ntBASIC4.27□□□□□ -1.73
Sox1P53783 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC4.27□□□□□ -1.73
Sox1P53783 Gm26204-201ENSMUST00000082906 107 ntBASIC4.27□□□□□ -1.73
Sox1P53783 Gm23042-201ENSMUST00000083866 101 ntBASIC4.27□□□□□ -1.73
Sox1P53783 Gm25257-201ENSMUST00000083907 110 ntBASIC4.27□□□□□ -1.73
Sox1P53783 AC162938.2-205ENSMUST00000217551 2828 ntBASIC4.27□□□□□ -1.73
Sox1P53783 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Sox1P53783 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
Sox1P53783 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC4.27□□□□□ -1.73
Sox1P53783 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Sox1P53783 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Sox1P53783 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Sox1P53783 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
Sox1P53783 Gm38265-201ENSMUST00000193479 3766 ntBASIC4.27□□□□□ -1.73
Sox1P53783 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
Sox1P53783 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Sox1P53783 Gm43824-201ENSMUST00000199042 2588 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Sox1P53783 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Sox1P53783 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Sox1P53783 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Sox1P53783 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Sox1P53783 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Sox1P53783 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Sox1P53783 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Sox1P53783 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Sox1P53783 AC121598.3-201ENSMUST00000227179 1643 ntBASIC4.26□□□□□ -1.73
Sox1P53783 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Sox1P53783 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Sox1P53783 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Sox1P53783 Gm22023-201ENSMUST00000104354 130 ntBASIC4.26□□□□□ -1.73
Sox1P53783 Gm12797-201ENSMUST00000118645 273 ntBASIC4.26□□□□□ -1.73
Sox1P53783 Gm15022-201ENSMUST00000122074 746 ntBASIC4.26□□□□□ -1.73
Sox1P53783 Gm25105-201ENSMUST00000122477 130 ntBASIC4.26□□□□□ -1.73
Sox1P53783 Gm23640-201ENSMUST00000157860 104 ntBASIC4.26□□□□□ -1.73
Sox1P53783 Gm23277-201ENSMUST00000157914 136 ntBASIC4.26□□□□□ -1.73
Sox1P53783 Gm17186-201ENSMUST00000171742 456 ntBASIC4.26□□□□□ -1.73
Sox1P53783 Gm17966-201ENSMUST00000193453 594 ntBASIC4.26□□□□□ -1.73
Sox1P53783 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC4.26□□□□□ -1.73
Sox1P53783 Gm43427-201ENSMUST00000198188 331 ntBASIC4.26□□□□□ -1.73
Sox1P53783 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Sox1P53783 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC4.26□□□□□ -1.73
Sox1P53783 AC115735.2-201ENSMUST00000227135 351 ntBASIC4.26□□□□□ -1.73
Sox1P53783 AC113031.4-201ENSMUST00000228381 514 ntBASIC4.26□□□□□ -1.73
Sox1P53783 AC165284.1-201ENSMUST00000228614 458 ntBASIC4.26□□□□□ -1.73
Sox1P53783 Mir133a-1-201ENSMUST00000083465 68 ntBASIC4.26□□□□□ -1.73
Sox1P53783 AF357428-201ENSMUST00000083815 69 ntBASIC4.26□□□□□ -1.73
Sox1P53783 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Sox1P53783 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Sox1P53783 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Sox1P53783 Ccr2-202ENSMUST00000165984 3515 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Sox1P53783 Gm32444-201ENSMUST00000195147 3511 ntBASIC4.26□□□□□ -1.73
Sox1P53783 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC4.26□□□□□ -1.73
Sox1P53783 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Sox1P53783 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Sox1P53783 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Sox1P53783 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Sox1P53783 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Sox1P53783 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Sox1P53783 Gm17131-201ENSMUST00000164420 3846 ntBASIC4.25□□□□□ -1.73
Sox1P53783 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
Sox1P53783 Gm11065-201ENSMUST00000111462 228 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms