Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gm25111-201ENSMUST00000116686 147 ntBASIC2.56□□□□□ -2
Nkx2-1P50220 Gm24275-201ENSMUST00000116780 146 ntBASIC2.56□□□□□ -2
Nkx2-1P50220 Gm26156-201ENSMUST00000116999 123 ntBASIC2.56□□□□□ -2
Nkx2-1P50220 Gm13076-201ENSMUST00000118041 204 ntBASIC2.56□□□□□ -2
Nkx2-1P50220 Gm13210-201ENSMUST00000121483 273 ntBASIC2.56□□□□□ -2
Nkx2-1P50220 Gm15065-201ENSMUST00000121699 273 ntBASIC2.56□□□□□ -2
Nkx2-1P50220 Gm22479-201ENSMUST00000122566 81 ntBASIC2.56□□□□□ -2
Nkx2-1P50220 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC2.56□□□□□ -2
Nkx2-1P50220 Gm26275-201ENSMUST00000157101 268 ntBASIC2.56□□□□□ -2
Nkx2-1P50220 Gm22320-201ENSMUST00000157149 312 ntBASIC2.56□□□□□ -2
Nkx2-1P50220 Gm25970-201ENSMUST00000157165 86 ntBASIC2.56□□□□□ -2
Nkx2-1P50220 Gm22563-201ENSMUST00000157333 269 ntBASIC2.56□□□□□ -2
Nkx2-1P50220 Gm25519-201ENSMUST00000158392 127 ntBASIC2.56□□□□□ -2
Nkx2-1P50220 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC2.56□□□□□ -2
Nkx2-1P50220 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC2.56□□□□□ -2
Nkx2-1P50220 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC2.56□□□□□ -2
Nkx2-1P50220 Gm26426-201ENSMUST00000177866 123 ntBASIC2.56□□□□□ -2
Nkx2-1P50220 Gm26060-201ENSMUST00000180094 123 ntBASIC2.56□□□□□ -2
Nkx2-1P50220 Gm24518-201ENSMUST00000180275 94 ntBASIC2.56□□□□□ -2
Nkx2-1P50220 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC2.56□□□□□ -2
Nkx2-1P50220 Mir6402-201ENSMUST00000183406 80 ntBASIC2.56□□□□□ -2
Nkx2-1P50220 Gm27773-201ENSMUST00000184087 78 ntBASIC2.56□□□□□ -2
Nkx2-1P50220 Gm27245-201ENSMUST00000184385 376 ntBASIC2.56□□□□□ -2
Nkx2-1P50220 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC2.56□□□□□ -2
Nkx2-1P50220 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC2.56□□□□□ -2
Nkx2-1P50220 Gm43402-201ENSMUST00000197159 159 ntBASIC2.56□□□□□ -2
Nkx2-1P50220 AL603834.1-201ENSMUST00000198372 121 ntBASIC2.56□□□□□ -2
Nkx2-1P50220 Gm44468-201ENSMUST00000199516 105 ntBASIC2.56□□□□□ -2
Nkx2-1P50220 Gm44011-201ENSMUST00000203336 394 ntBASIC2.56□□□□□ -2
Nkx2-1P50220 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC2.56□□□□□ -2
Nkx2-1P50220 AC132954.1-201ENSMUST00000221017 342 ntBASIC2.56□□□□□ -2
Nkx2-1P50220 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC2.56□□□□□ -2
Nkx2-1P50220 AC104832.1-201ENSMUST00000222938 550 ntBASIC2.56□□□□□ -2
Nkx2-1P50220 AC160550.3-201ENSMUST00000226818 400 ntBASIC2.56□□□□□ -2
Nkx2-1P50220 AC112935.1-201ENSMUST00000227603 250 ntBASIC2.56□□□□□ -2
Nkx2-1P50220 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC2.56□□□□□ -2
Nkx2-1P50220 AC139350.4-201ENSMUST00000228483 798 ntBASIC2.56□□□□□ -2
Nkx2-1P50220 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC2.56□□□□□ -2
Nkx2-1P50220 Gm26228-201ENSMUST00000082512 107 ntBASIC2.56□□□□□ -2
Nkx2-1P50220 Gm25080-201ENSMUST00000082526 107 ntBASIC2.56□□□□□ -2
Nkx2-1P50220 Gm23404-201ENSMUST00000082543 97 ntBASIC2.56□□□□□ -2
Nkx2-1P50220 Gm22061-201ENSMUST00000082557 107 ntBASIC2.56□□□□□ -2
Nkx2-1P50220 Gm24460-201ENSMUST00000082731 106 ntBASIC2.56□□□□□ -2
Nkx2-1P50220 Gm24948-201ENSMUST00000082866 207 ntBASIC2.56□□□□□ -2
Nkx2-1P50220 Mir181a-2-201ENSMUST00000083489 76 ntBASIC2.56□□□□□ -2
Nkx2-1P50220 Gm25518-201ENSMUST00000083864 107 ntBASIC2.56□□□□□ -2
Nkx2-1P50220 Mir452-201ENSMUST00000093629 85 ntBASIC2.56□□□□□ -2
Nkx2-1P50220 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Nkx2-1P50220 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Nkx2-1P50220 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
Nkx2-1P50220 AC153526.2-201ENSMUST00000218206 2031 ntBASIC2.56□□□□□ -2
Nkx2-1P50220 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Nkx2-1P50220 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC2.55□□□□□ -2
Nkx2-1P50220 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Nkx2-1P50220 Gm381-201ENSMUST00000117443 2037 ntBASIC2.55□□□□□ -2
Nkx2-1P50220 Gm11386-201ENSMUST00000117761 347 ntBASIC2.55□□□□□ -2
Nkx2-1P50220 Gm14681-201ENSMUST00000118047 411 ntBASIC2.55□□□□□ -2
Nkx2-1P50220 Gm13804-201ENSMUST00000119552 172 ntBASIC2.55□□□□□ -2
Nkx2-1P50220 Gm12213-201ENSMUST00000119924 353 ntBASIC2.55□□□□□ -2
Nkx2-1P50220 Gm26477-201ENSMUST00000122617 323 ntBASIC2.55□□□□□ -2
Nkx2-1P50220 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC2.55□□□□□ -2
Nkx2-1P50220 Gm25572-201ENSMUST00000157527 172 ntBASIC2.55□□□□□ -2
Nkx2-1P50220 Mir1934-201ENSMUST00000158127 83 ntBASIC2.55□□□□□ -2
Nkx2-1P50220 Gm22611-201ENSMUST00000158288 150 ntBASIC2.55□□□□□ -2
Nkx2-1P50220 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Nkx2-1P50220 Gm20673-201ENSMUST00000177167 430 ntBASIC2.55□□□□□ -2
Nkx2-1P50220 Gm27660-201ENSMUST00000184028 208 ntBASIC2.55□□□□□ -2
Nkx2-1P50220 Gm27582-201ENSMUST00000184084 126 ntBASIC2.55□□□□□ -2
Nkx2-1P50220 Gm29429-201ENSMUST00000187071 121 ntBASIC2.55□□□□□ -2
Nkx2-1P50220 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC2.55□□□□□ -2
Nkx2-1P50220 Gm38388-201ENSMUST00000195569 1430 ntBASIC2.55□□□□□ -2
Nkx2-1P50220 Gm44927-201ENSMUST00000207573 716 ntBASIC2.55□□□□□ -2
Nkx2-1P50220 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Nkx2-1P50220 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC2.55□□□□□ -2
Nkx2-1P50220 Gm21007-201ENSMUST00000221024 326 ntBASIC2.55□□□□□ -2
Nkx2-1P50220 Gm19441-201ENSMUST00000221545 330 ntBASIC2.55□□□□□ -2
Nkx2-1P50220 AC174797.3-202ENSMUST00000224578 587 ntBASIC2.55□□□□□ -2
Nkx2-1P50220 AC154788.1-201ENSMUST00000225003 340 ntBASIC2.55□□□□□ -2
Nkx2-1P50220 CT025689.4-201ENSMUST00000225926 601 ntBASIC2.55□□□□□ -2
Nkx2-1P50220 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Nkx2-1P50220 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Nkx2-1P50220 Gm25202-201ENSMUST00000082838 191 ntBASIC2.55□□□□□ -2
Nkx2-1P50220 Mir137-201ENSMUST00000083635 73 ntBASIC2.55□□□□□ -2
Nkx2-1P50220 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.55□□□□□ -2
Nkx2-1P50220 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.55□□□□□ -2
Nkx2-1P50220 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
Nkx2-1P50220 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC2.55□□□□□ -2
Nkx2-1P50220 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Nkx2-1P50220 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
Nkx2-1P50220 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Nkx2-1P50220 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Nkx2-1P50220 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Nkx2-1P50220 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Nkx2-1P50220 Mir450-2-201ENSMUST00000102444 69 ntBASIC2.54□□□□□ -2
Nkx2-1P50220 n-R5s31-201ENSMUST00000104162 110 ntBASIC2.54□□□□□ -2
Nkx2-1P50220 Gm25420-201ENSMUST00000104216 127 ntBASIC2.54□□□□□ -2
Nkx2-1P50220 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC2.54□□□□□ -2
Nkx2-1P50220 Gm2066-201ENSMUST00000118046 389 ntBASIC2.54□□□□□ -2
Nkx2-1P50220 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC2.54□□□□□ -2
Nkx2-1P50220 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC2.54□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms