Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm13457-201ENSMUST00000117885 267 ntBASIC3.96□□□□□ -1.78
Usp4P35123 Gm11566-201ENSMUST00000118550 203 ntBASIC3.96□□□□□ -1.78
Usp4P35123 Gm15313-201ENSMUST00000119179 282 ntBASIC3.96□□□□□ -1.78
Usp4P35123 Gm15799-201ENSMUST00000120899 289 ntBASIC3.96□□□□□ -1.78
Usp4P35123 n-R5s87-201ENSMUST00000122752 116 ntBASIC3.96□□□□□ -1.78
Usp4P35123 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Usp4P35123 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC3.96□□□□□ -1.78
Usp4P35123 Gm23123-201ENSMUST00000157648 144 ntBASIC3.96□□□□□ -1.78
Usp4P35123 Gm23545-201ENSMUST00000158205 104 ntBASIC3.96□□□□□ -1.78
Usp4P35123 Gm24727-201ENSMUST00000158231 144 ntBASIC3.96□□□□□ -1.78
Usp4P35123 Gm25939-201ENSMUST00000179876 191 ntBASIC3.96□□□□□ -1.78
Usp4P35123 Mir8106-201ENSMUST00000184520 139 ntBASIC3.96□□□□□ -1.78
Usp4P35123 Gm5829-201ENSMUST00000191383 351 ntBASIC3.96□□□□□ -1.78
Usp4P35123 Gm42451-201ENSMUST00000197410 244 ntBASIC3.96□□□□□ -1.78
Usp4P35123 Gm43814-201ENSMUST00000197851 413 ntBASIC3.96□□□□□ -1.78
Usp4P35123 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Usp4P35123 CT010506.3-201ENSMUST00000223699 410 ntBASIC3.96□□□□□ -1.78
Usp4P35123 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Usp4P35123 mt-Ti-201ENSMUST00000082393 69 ntBASIC3.96□□□□□ -1.78
Usp4P35123 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Usp4P35123 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3.96□□□□□ -1.78
Usp4P35123 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
Usp4P35123 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Usp4P35123 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Usp4P35123 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Usp4P35123 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Usp4P35123 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC3.95□□□□□ -1.78
Usp4P35123 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.95□□□□□ -1.78
Usp4P35123 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Usp4P35123 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
Usp4P35123 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Usp4P35123 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Usp4P35123 Gm22936-201ENSMUST00000103955 126 ntBASIC3.95□□□□□ -1.78
Usp4P35123 Gm15151-201ENSMUST00000117106 177 ntBASIC3.95□□□□□ -1.78
Usp4P35123 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC3.95□□□□□ -1.78
Usp4P35123 Gm14845-201ENSMUST00000121259 306 ntBASIC3.95□□□□□ -1.78
Usp4P35123 Gm22598-201ENSMUST00000157600 127 ntBASIC3.95□□□□□ -1.78
Usp4P35123 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC3.95□□□□□ -1.78
Usp4P35123 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
Usp4P35123 Gm25956-201ENSMUST00000175115 217 ntBASIC3.95□□□□□ -1.78
Usp4P35123 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.95□□□□□ -1.78
Usp4P35123 Mir6346-201ENSMUST00000183982 81 ntBASIC3.95□□□□□ -1.78
Usp4P35123 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC3.95□□□□□ -1.78
Usp4P35123 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC3.95□□□□□ -1.78
Usp4P35123 Gm37791-201ENSMUST00000195081 286 ntBASIC3.95□□□□□ -1.78
Usp4P35123 Gm44881-201ENSMUST00000205425 367 ntBASIC3.95□□□□□ -1.78
Usp4P35123 Gm45796-201ENSMUST00000212483 114 ntBASIC3.95□□□□□ -1.78
Usp4P35123 AC164161.1-201ENSMUST00000214076 639 ntBASIC3.95□□□□□ -1.78
Usp4P35123 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC3.95□□□□□ -1.78
Usp4P35123 AC173482.4-201ENSMUST00000225096 348 ntBASIC3.95□□□□□ -1.78
Usp4P35123 Gm10088-201ENSMUST00000074116 423 ntBASIC3.95□□□□□ -1.78
Usp4P35123 Gm26225-201ENSMUST00000082508 135 ntBASIC3.95□□□□□ -1.78
Usp4P35123 Gm23518-201ENSMUST00000082835 153 ntBASIC3.95□□□□□ -1.78
Usp4P35123 Gm25411-201ENSMUST00000083760 151 ntBASIC3.95□□□□□ -1.78
Usp4P35123 n-R5s54-201ENSMUST00000083837 112 ntBASIC3.95□□□□□ -1.78
Usp4P35123 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Usp4P35123 Gm36960-201ENSMUST00000195491 2035 ntBASIC3.95□□□□□ -1.78
Usp4P35123 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
Usp4P35123 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Usp4P35123 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Usp4P35123 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.94□□□□□ -1.78
Usp4P35123 Gm10811-201ENSMUST00000221985 2448 ntBASIC3.94□□□□□ -1.78
Usp4P35123 Gm45557-201ENSMUST00000210004 1651 ntBASIC3.94□□□□□ -1.78
Usp4P35123 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC3.94□□□□□ -1.78
Usp4P35123 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Usp4P35123 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Usp4P35123 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Usp4P35123 n-R5s52-201ENSMUST00000104614 113 ntBASIC3.94□□□□□ -1.78
Usp4P35123 Gm13329-201ENSMUST00000117063 265 ntBASIC3.94□□□□□ -1.78
Usp4P35123 Gm23257-201ENSMUST00000158322 132 ntBASIC3.94□□□□□ -1.78
Usp4P35123 Gm8292-201ENSMUST00000162574 396 ntBASIC3.94□□□□□ -1.78
Usp4P35123 Gm23365-201ENSMUST00000175019 125 ntBASIC3.94□□□□□ -1.78
Usp4P35123 Gm25960-201ENSMUST00000175110 125 ntBASIC3.94□□□□□ -1.78
Usp4P35123 Gm44453-201ENSMUST00000175161 126 ntBASIC3.94□□□□□ -1.78
Usp4P35123 Gm25195-201ENSMUST00000177656 126 ntBASIC3.94□□□□□ -1.78
Usp4P35123 Gm27997-201ENSMUST00000184942 69 ntBASIC3.94□□□□□ -1.78
Usp4P35123 Gm28148-201ENSMUST00000186924 697 ntBASIC3.94□□□□□ -1.78
Usp4P35123 Gm9402-201ENSMUST00000196849 388 ntBASIC3.94□□□□□ -1.78
Usp4P35123 Gm43600-201ENSMUST00000202134 223 ntBASIC3.94□□□□□ -1.78
Usp4P35123 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.94□□□□□ -1.78
Usp4P35123 Gm22169-201ENSMUST00000083229 107 ntBASIC3.94□□□□□ -1.78
Usp4P35123 Mir370-201ENSMUST00000083499 79 ntBASIC3.94□□□□□ -1.78
Usp4P35123 AC154462.1-201ENSMUST00000228897 2260 ntBASIC3.94□□□□□ -1.78
Usp4P35123 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Usp4P35123 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Usp4P35123 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Usp4P35123 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Usp4P35123 AC102369.2-201ENSMUST00000219725 1679 ntBASIC3.94□□□□□ -1.78
Usp4P35123 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC3.94□□□□□ -1.78
Usp4P35123 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Usp4P35123 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Usp4P35123 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Usp4P35123 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Usp4P35123 Gm25833-201ENSMUST00000104137 133 ntBASIC3.93□□□□□ -1.78
Usp4P35123 Gm12335-201ENSMUST00000119738 327 ntBASIC3.93□□□□□ -1.78
Usp4P35123 Gm11645-201ENSMUST00000121589 649 ntBASIC3.93□□□□□ -1.78
Usp4P35123 Gm24839-201ENSMUST00000122602 107 ntBASIC3.93□□□□□ -1.78
Usp4P35123 Gm7241-201ENSMUST00000159853 357 ntBASIC3.93□□□□□ -1.78
Usp4P35123 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.93□□□□□ -1.78
Usp4P35123 Gm27580-201ENSMUST00000183666 149 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms