Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
Trav8-1A0A075B641 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC0.94□□□□□ -2.26
Trav8-1A0A075B641 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
Trav8-1A0A075B641 Zfp640-202ENSMUST00000224116 1562 ntBASIC0.93□□□□□ -2.26
Trav8-1A0A075B641 Gm14932-201ENSMUST00000117112 453 ntBASIC0.93□□□□□ -2.26
Trav8-1A0A075B641 Gm16428-201ENSMUST00000121193 723 ntBASIC0.93□□□□□ -2.26
Trav8-1A0A075B641 Gm14770-201ENSMUST00000122197 312 ntBASIC0.93□□□□□ -2.26
Trav8-1A0A075B641 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC0.93□□□□□ -2.26
Trav8-1A0A075B641 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC0.93□□□□□ -2.26
Trav8-1A0A075B641 Gm23391-201ENSMUST00000157579 104 ntBASIC0.93□□□□□ -2.26
Trav8-1A0A075B641 Gm22316-201ENSMUST00000158012 216 ntBASIC0.93□□□□□ -2.26
Trav8-1A0A075B641 Gm16584-201ENSMUST00000159267 189 ntBASIC0.93□□□□□ -2.26
Trav8-1A0A075B641 Gm28151-201ENSMUST00000189404 951 ntBASIC0.93□□□□□ -2.26
Trav8-1A0A075B641 Trbv7-201ENSMUST00000193339 402 ntBASIC0.93□□□□□ -2.26
Trav8-1A0A075B641 Gm42924-201ENSMUST00000197261 185 ntBASIC0.93□□□□□ -2.26
Trav8-1A0A075B641 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC0.93□□□□□ -2.26
Trav8-1A0A075B641 Igkv1-136-201ENSMUST00000200635 297 ntBASIC0.93□□□□□ -2.26
Trav8-1A0A075B641 Gm44844-201ENSMUST00000207242 336 ntBASIC0.93□□□□□ -2.26
Trav8-1A0A075B641 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC0.93□□□□□ -2.26
Trav8-1A0A075B641 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC0.93□□□□□ -2.26
Trav8-1A0A075B641 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
Trav8-1A0A075B641 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
Trav8-1A0A075B641 Olfr197-201ENSMUST00000080031 926 ntBASIC0.93□□□□□ -2.26
Trav8-1A0A075B641 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC0.93□□□□□ -2.26
Trav8-1A0A075B641 Gm26922-201ENSMUST00000082687 72 ntBASIC0.93□□□□□ -2.26
Trav8-1A0A075B641 Gm23727-201ENSMUST00000083352 164 ntBASIC0.93□□□□□ -2.26
Trav8-1A0A075B641 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
Trav8-1A0A075B641 BC022960-201ENSMUST00000119987 1815 ntBASIC0.93□□□□□ -2.26
Trav8-1A0A075B641 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC0.93□□□□□ -2.26
Trav8-1A0A075B641 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
Trav8-1A0A075B641 Gm37941-201ENSMUST00000192170 2309 ntBASIC0.92□□□□□ -2.26
Trav8-1A0A075B641 AC153950.1-201ENSMUST00000219916 3238 ntBASIC0.92□□□□□ -2.26
Trav8-1A0A075B641 Gm15183-201ENSMUST00000118933 348 ntBASIC0.92□□□□□ -2.26
Trav8-1A0A075B641 Gm11857-201ENSMUST00000119817 324 ntBASIC0.92□□□□□ -2.26
Trav8-1A0A075B641 Gm11430-201ENSMUST00000121317 217 ntBASIC0.92□□□□□ -2.26
Trav8-1A0A075B641 Gm23463-201ENSMUST00000122468 99 ntBASIC0.92□□□□□ -2.26
Trav8-1A0A075B641 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC0.92□□□□□ -2.26
Trav8-1A0A075B641 Gm24716-201ENSMUST00000157524 104 ntBASIC0.92□□□□□ -2.26
Trav8-1A0A075B641 Gm22776-201ENSMUST00000178634 94 ntBASIC0.92□□□□□ -2.26
Trav8-1A0A075B641 Gm23767-201ENSMUST00000179278 94 ntBASIC0.92□□□□□ -2.26
Trav8-1A0A075B641 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
Trav8-1A0A075B641 Gm27493-201ENSMUST00000184128 78 ntBASIC0.92□□□□□ -2.26
Trav8-1A0A075B641 Gm43007-201ENSMUST00000197618 291 ntBASIC0.92□□□□□ -2.26
Trav8-1A0A075B641 Gm42774-201ENSMUST00000198854 283 ntBASIC0.92□□□□□ -2.26
Trav8-1A0A075B641 AC165293.1-201ENSMUST00000219669 329 ntBASIC0.92□□□□□ -2.26
Trav8-1A0A075B641 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC0.92□□□□□ -2.26
Trav8-1A0A075B641 CT009733.1-201ENSMUST00000225322 425 ntBASIC0.92□□□□□ -2.26
Trav8-1A0A075B641 AC133076.1-201ENSMUST00000228074 484 ntBASIC0.92□□□□□ -2.26
Trav8-1A0A075B641 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
Trav8-1A0A075B641 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
Trav8-1A0A075B641 Gm24805-201ENSMUST00000082931 104 ntBASIC0.92□□□□□ -2.26
Trav8-1A0A075B641 Mir151-201ENSMUST00000083678 68 ntBASIC0.92□□□□□ -2.26
Trav8-1A0A075B641 Snord7-201ENSMUST00000083781 97 ntBASIC0.92□□□□□ -2.26
Trav8-1A0A075B641 Gm15088-201ENSMUST00000117973 1508 ntBASIC0.92□□□□□ -2.26
Trav8-1A0A075B641 Gm15098-201ENSMUST00000119036 1508 ntBASIC0.92□□□□□ -2.26
Trav8-1A0A075B641 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
Trav8-1A0A075B641 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC0.91□□□□□ -2.26
Trav8-1A0A075B641 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
Trav8-1A0A075B641 Gm25376-201ENSMUST00000104340 133 ntBASIC0.91□□□□□ -2.26
Trav8-1A0A075B641 Mir669d-201ENSMUST00000104644 121 ntBASIC0.91□□□□□ -2.26
Trav8-1A0A075B641 Gm14566-201ENSMUST00000118915 321 ntBASIC0.91□□□□□ -2.26
Trav8-1A0A075B641 Gm14360-201ENSMUST00000120670 393 ntBASIC0.91□□□□□ -2.26
Trav8-1A0A075B641 Gm22082-201ENSMUST00000157587 161 ntBASIC0.91□□□□□ -2.26
Trav8-1A0A075B641 Gm22485-201ENSMUST00000157990 109 ntBASIC0.91□□□□□ -2.26
Trav8-1A0A075B641 Gm23181-201ENSMUST00000158685 110 ntBASIC0.91□□□□□ -2.26
Trav8-1A0A075B641 Gm23473-201ENSMUST00000158883 116 ntBASIC0.91□□□□□ -2.26
Trav8-1A0A075B641 Gm26157-201ENSMUST00000158974 126 ntBASIC0.91□□□□□ -2.26
Trav8-1A0A075B641 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
Trav8-1A0A075B641 Mir5118-201ENSMUST00000175551 67 ntBASIC0.91□□□□□ -2.26
Trav8-1A0A075B641 Mir7667-201ENSMUST00000183866 63 ntBASIC0.91□□□□□ -2.26
Trav8-1A0A075B641 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
Trav8-1A0A075B641 Gm37081-201ENSMUST00000192034 196 ntBASIC0.91□□□□□ -2.26
Trav8-1A0A075B641 Gm37684-201ENSMUST00000192779 355 ntBASIC0.91□□□□□ -2.26
Trav8-1A0A075B641 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC0.91□□□□□ -2.26
Trav8-1A0A075B641 Gm33354-201ENSMUST00000195448 906 ntBASIC0.91□□□□□ -2.26
Trav8-1A0A075B641 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC0.91□□□□□ -2.26
Trav8-1A0A075B641 Snord43-201ENSMUST00000199549 108 ntBASIC0.91□□□□□ -2.26
Trav8-1A0A075B641 Gm43979-201ENSMUST00000203179 475 ntBASIC0.91□□□□□ -2.26
Trav8-1A0A075B641 Gm44041-201ENSMUST00000203678 396 ntBASIC0.91□□□□□ -2.26
Trav8-1A0A075B641 AL929285.1-201ENSMUST00000215522 229 ntBASIC0.91□□□□□ -2.26
Trav8-1A0A075B641 AC154828.2-201ENSMUST00000220908 1070 ntBASIC0.91□□□□□ -2.26
Trav8-1A0A075B641 AC239878.2-201ENSMUST00000224048 464 ntBASIC0.91□□□□□ -2.26
Trav8-1A0A075B641 CT033785.1-201ENSMUST00000224872 272 ntBASIC0.91□□□□□ -2.26
Trav8-1A0A075B641 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
Trav8-1A0A075B641 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
Trav8-1A0A075B641 Mir320-201ENSMUST00000083594 82 ntBASIC0.91□□□□□ -2.26
Trav8-1A0A075B641 Gm44821-201ENSMUST00000208212 2002 ntBASIC0.91□□□□□ -2.26
Trav8-1A0A075B641 Gm7648-201ENSMUST00000173036 1658 ntBASIC0.91□□□□□ -2.26
Trav8-1A0A075B641 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
Trav8-1A0A075B641 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
Trav8-1A0A075B641 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC0.9□□□□□ -2.27
Trav8-1A0A075B641 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC0.9□□□□□ -2.27
Trav8-1A0A075B641 Mir758-201ENSMUST00000103260 81 ntBASIC0.9□□□□□ -2.27
Trav8-1A0A075B641 Gm25541-201ENSMUST00000116888 126 ntBASIC0.9□□□□□ -2.27
Trav8-1A0A075B641 Gm11268-201ENSMUST00000118347 267 ntBASIC0.9□□□□□ -2.27
Trav8-1A0A075B641 Gm13359-201ENSMUST00000119000 695 ntBASIC0.9□□□□□ -2.27
Trav8-1A0A075B641 Gm15530-201ENSMUST00000122206 555 ntBASIC0.9□□□□□ -2.27
Trav8-1A0A075B641 Mir1904-201ENSMUST00000122702 80 ntBASIC0.9□□□□□ -2.27
Trav8-1A0A075B641 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC0.9□□□□□ -2.27
Trav8-1A0A075B641 Mir1949-201ENSMUST00000157434 141 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms