Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Trim47Q8C0E3 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Trim47Q8C0E3 Gm42559-201ENSMUST00000201811 3532 ntBASIC4.87□□□□□ -1.63
Trim47Q8C0E3 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
Trim47Q8C0E3 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Trim47Q8C0E3 Gm26367-201ENSMUST00000104165 132 ntBASIC4.87□□□□□ -1.63
Trim47Q8C0E3 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Trim47Q8C0E3 Gm25283-201ENSMUST00000157272 77 ntBASIC4.87□□□□□ -1.63
Trim47Q8C0E3 Gm23260-201ENSMUST00000158317 172 ntBASIC4.87□□□□□ -1.63
Trim47Q8C0E3 Gm25606-201ENSMUST00000158363 95 ntBASIC4.87□□□□□ -1.63
Trim47Q8C0E3 Gm25380-201ENSMUST00000175463 107 ntBASIC4.87□□□□□ -1.63
Trim47Q8C0E3 Gm24641-201ENSMUST00000178055 107 ntBASIC4.87□□□□□ -1.63
Trim47Q8C0E3 Gm25484-201ENSMUST00000178217 107 ntBASIC4.87□□□□□ -1.63
Trim47Q8C0E3 Gm26138-201ENSMUST00000179236 107 ntBASIC4.87□□□□□ -1.63
Trim47Q8C0E3 Gm22821-201ENSMUST00000179288 107 ntBASIC4.87□□□□□ -1.63
Trim47Q8C0E3 Gm37050-201ENSMUST00000193464 466 ntBASIC4.87□□□□□ -1.63
Trim47Q8C0E3 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC4.87□□□□□ -1.63
Trim47Q8C0E3 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC4.87□□□□□ -1.63
Trim47Q8C0E3 Gm6303-201ENSMUST00000210123 471 ntBASIC4.87□□□□□ -1.63
Trim47Q8C0E3 AC154527.5-201ENSMUST00000224448 496 ntBASIC4.87□□□□□ -1.63
Trim47Q8C0E3 AC174459.2-201ENSMUST00000226036 160 ntBASIC4.87□□□□□ -1.63
Trim47Q8C0E3 Gm23140-201ENSMUST00000082487 107 ntBASIC4.87□□□□□ -1.63
Trim47Q8C0E3 Gm23298-201ENSMUST00000083181 107 ntBASIC4.87□□□□□ -1.63
Trim47Q8C0E3 Gm24614-201ENSMUST00000083269 107 ntBASIC4.87□□□□□ -1.63
Trim47Q8C0E3 Gm22057-201ENSMUST00000083387 107 ntBASIC4.87□□□□□ -1.63
Trim47Q8C0E3 Gm25516-201ENSMUST00000083857 107 ntBASIC4.87□□□□□ -1.63
Trim47Q8C0E3 Gm23947-201ENSMUST00000093636 107 ntBASIC4.87□□□□□ -1.63
Trim47Q8C0E3 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC4.87□□□□□ -1.63
Trim47Q8C0E3 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Trim47Q8C0E3 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Trim47Q8C0E3 Gm8674-201ENSMUST00000179367 3047 ntBASIC4.87□□□□□ -1.63
Trim47Q8C0E3 Gm45517-201ENSMUST00000209973 2468 ntBASIC4.87□□□□□ -1.63
Trim47Q8C0E3 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Trim47Q8C0E3 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Trim47Q8C0E3 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Trim47Q8C0E3 Gm15624-203ENSMUST00000204811 3402 ntBASIC4.87□□□□□ -1.63
Trim47Q8C0E3 Gm38235-201ENSMUST00000194600 4952 ntBASIC4.86□□□□□ -1.63
Trim47Q8C0E3 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC4.86□□□□□ -1.63
Trim47Q8C0E3 AC153801.2-201ENSMUST00000219875 3372 ntBASIC4.86□□□□□ -1.63
Trim47Q8C0E3 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Trim47Q8C0E3 Mir676-201ENSMUST00000102443 89 ntBASIC4.86□□□□□ -1.63
Trim47Q8C0E3 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC4.86□□□□□ -1.63
Trim47Q8C0E3 Gm22936-201ENSMUST00000103955 126 ntBASIC4.86□□□□□ -1.63
Trim47Q8C0E3 Gm12902-201ENSMUST00000118389 322 ntBASIC4.86□□□□□ -1.63
Trim47Q8C0E3 Gm23782-201ENSMUST00000157939 120 ntBASIC4.86□□□□□ -1.63
Trim47Q8C0E3 Gm22139-201ENSMUST00000158747 105 ntBASIC4.86□□□□□ -1.63
Trim47Q8C0E3 Gm24926-201ENSMUST00000178053 79 ntBASIC4.86□□□□□ -1.63
Trim47Q8C0E3 Gm22632-201ENSMUST00000178266 79 ntBASIC4.86□□□□□ -1.63
Trim47Q8C0E3 Gm22069-201ENSMUST00000179911 107 ntBASIC4.86□□□□□ -1.63
Trim47Q8C0E3 Gm37417-201ENSMUST00000195257 454 ntBASIC4.86□□□□□ -1.63
Trim47Q8C0E3 Gm44563-201ENSMUST00000207958 178 ntBASIC4.86□□□□□ -1.63
Trim47Q8C0E3 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC4.86□□□□□ -1.63
Trim47Q8C0E3 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC4.86□□□□□ -1.63
Trim47Q8C0E3 AC166358.4-201ENSMUST00000223030 105 ntBASIC4.86□□□□□ -1.63
Trim47Q8C0E3 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Trim47Q8C0E3 Gm26495-201ENSMUST00000083152 137 ntBASIC4.86□□□□□ -1.63
Trim47Q8C0E3 Gm26314-201ENSMUST00000083891 107 ntBASIC4.86□□□□□ -1.63
Trim47Q8C0E3 Gm44822-201ENSMUST00000208559 6389 ntBASIC4.86□□□□□ -1.63
Trim47Q8C0E3 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Trim47Q8C0E3 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Trim47Q8C0E3 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Trim47Q8C0E3 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Trim47Q8C0E3 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Trim47Q8C0E3 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Trim47Q8C0E3 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Trim47Q8C0E3 Gm2033-201ENSMUST00000210753 2287 ntBASIC4.85□□□□□ -1.63
Trim47Q8C0E3 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Trim47Q8C0E3 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Trim47Q8C0E3 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Trim47Q8C0E3 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Trim47Q8C0E3 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
Trim47Q8C0E3 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC4.85□□□□□ -1.63
Trim47Q8C0E3 Mir19b-1-201ENSMUST00000102301 87 ntBASIC4.85□□□□□ -1.63
Trim47Q8C0E3 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Trim47Q8C0E3 Gm11367-201ENSMUST00000117802 120 ntBASIC4.85□□□□□ -1.63
Trim47Q8C0E3 Gm14782-201ENSMUST00000120151 195 ntBASIC4.85□□□□□ -1.63
Trim47Q8C0E3 Gm2830-201ENSMUST00000140330 385 ntBASIC4.85□□□□□ -1.63
Trim47Q8C0E3 Gm5963-201ENSMUST00000143451 236 ntBASIC4.85□□□□□ -1.63
Trim47Q8C0E3 Gm28148-201ENSMUST00000186924 697 ntBASIC4.85□□□□□ -1.63
Trim47Q8C0E3 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Trim47Q8C0E3 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Trim47Q8C0E3 Gm45498-201ENSMUST00000210346 283 ntBASIC4.85□□□□□ -1.63
Trim47Q8C0E3 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC4.85□□□□□ -1.63
Trim47Q8C0E3 AC122242.1-201ENSMUST00000224650 304 ntBASIC4.85□□□□□ -1.63
Trim47Q8C0E3 Gm5248-201ENSMUST00000186108 4046 ntBASIC4.85□□□□□ -1.63
Trim47Q8C0E3 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Trim47Q8C0E3 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Trim47Q8C0E3 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC4.85□□□□□ -1.63
Trim47Q8C0E3 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC4.85□□□□□ -1.63
Trim47Q8C0E3 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC4.85□□□□□ -1.63
Trim47Q8C0E3 Gm38101-201ENSMUST00000193484 3557 ntBASIC4.84□□□□□ -1.63
Trim47Q8C0E3 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Trim47Q8C0E3 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Trim47Q8C0E3 Gm12304-201ENSMUST00000120312 385 ntBASIC4.84□□□□□ -1.63
Trim47Q8C0E3 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Trim47Q8C0E3 Gm22098-201ENSMUST00000157930 85 ntBASIC4.84□□□□□ -1.63
Trim47Q8C0E3 Gm25447-201ENSMUST00000158997 128 ntBASIC4.84□□□□□ -1.63
Trim47Q8C0E3 Gm22775-201ENSMUST00000177630 120 ntBASIC4.84□□□□□ -1.63
Trim47Q8C0E3 Gm24308-201ENSMUST00000177773 114 ntBASIC4.84□□□□□ -1.63
Trim47Q8C0E3 Gm23569-201ENSMUST00000180120 120 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms