Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Sh3rf1Q69ZI1 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC4.25□□□□□ -1.73
Sh3rf1Q69ZI1 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC4.25□□□□□ -1.73
Sh3rf1Q69ZI1 Gm23743-201ENSMUST00000157389 274 ntBASIC4.25□□□□□ -1.73
Sh3rf1Q69ZI1 Gm22989-201ENSMUST00000158313 86 ntBASIC4.25□□□□□ -1.73
Sh3rf1Q69ZI1 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC4.25□□□□□ -1.73
Sh3rf1Q69ZI1 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC4.25□□□□□ -1.73
Sh3rf1Q69ZI1 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC4.25□□□□□ -1.73
Sh3rf1Q69ZI1 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC4.25□□□□□ -1.73
Sh3rf1Q69ZI1 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC4.25□□□□□ -1.73
Sh3rf1Q69ZI1 Gm44092-201ENSMUST00000204470 258 ntBASIC4.25□□□□□ -1.73
Sh3rf1Q69ZI1 AC155715.1-201ENSMUST00000213575 463 ntBASIC4.25□□□□□ -1.73
Sh3rf1Q69ZI1 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
Sh3rf1Q69ZI1 AC153526.4-201ENSMUST00000217713 379 ntBASIC4.25□□□□□ -1.73
Sh3rf1Q69ZI1 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC4.25□□□□□ -1.73
Sh3rf1Q69ZI1 AC158523.1-201ENSMUST00000221398 328 ntBASIC4.25□□□□□ -1.73
Sh3rf1Q69ZI1 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC4.25□□□□□ -1.73
Sh3rf1Q69ZI1 Gm23932-201ENSMUST00000082914 107 ntBASIC4.25□□□□□ -1.73
Sh3rf1Q69ZI1 Gm7452-202ENSMUST00000202891 3039 ntBASIC4.25□□□□□ -1.73
Sh3rf1Q69ZI1 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
Sh3rf1Q69ZI1 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC4.25□□□□□ -1.73
Sh3rf1Q69ZI1 Gm36969-201ENSMUST00000194551 2809 ntBASIC4.25□□□□□ -1.73
Sh3rf1Q69ZI1 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Sh3rf1Q69ZI1 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Sh3rf1Q69ZI1 Gm43958-201ENSMUST00000204360 3544 ntBASIC4.24□□□□□ -1.73
Sh3rf1Q69ZI1 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
Sh3rf1Q69ZI1 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Sh3rf1Q69ZI1 Gm12719-201ENSMUST00000118859 241 ntBASIC4.24□□□□□ -1.73
Sh3rf1Q69ZI1 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC4.24□□□□□ -1.73
Sh3rf1Q69ZI1 Gm18520-201ENSMUST00000174783 658 ntBASIC4.24□□□□□ -1.73
Sh3rf1Q69ZI1 Mir669k-201ENSMUST00000177742 127 ntBASIC4.24□□□□□ -1.73
Sh3rf1Q69ZI1 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Sh3rf1Q69ZI1 Gm25121-201ENSMUST00000179846 79 ntBASIC4.24□□□□□ -1.73
Sh3rf1Q69ZI1 Gm25673-201ENSMUST00000179957 127 ntBASIC4.24□□□□□ -1.73
Sh3rf1Q69ZI1 Mir6540-201ENSMUST00000184886 108 ntBASIC4.24□□□□□ -1.73
Sh3rf1Q69ZI1 Gm27760-201ENSMUST00000185048 114 ntBASIC4.24□□□□□ -1.73
Sh3rf1Q69ZI1 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC4.24□□□□□ -1.73
Sh3rf1Q69ZI1 Gm37162-201ENSMUST00000191708 551 ntBASIC4.24□□□□□ -1.73
Sh3rf1Q69ZI1 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Sh3rf1Q69ZI1 CT485607.2-201ENSMUST00000214650 91 ntBASIC4.24□□□□□ -1.73
Sh3rf1Q69ZI1 AC155921.1-201ENSMUST00000216568 3841 ntBASIC4.24□□□□□ -1.73
Sh3rf1Q69ZI1 Gm9616-201ENSMUST00000221154 781 ntBASIC4.24□□□□□ -1.73
Sh3rf1Q69ZI1 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC4.24□□□□□ -1.73
Sh3rf1Q69ZI1 AC156790.5-201ENSMUST00000227075 231 ntBASIC4.24□□□□□ -1.73
Sh3rf1Q69ZI1 Gm24705-201ENSMUST00000082808 107 ntBASIC4.24□□□□□ -1.73
Sh3rf1Q69ZI1 Gm25204-201ENSMUST00000082843 106 ntBASIC4.24□□□□□ -1.73
Sh3rf1Q69ZI1 Mir26a-2-201ENSMUST00000083496 84 ntBASIC4.24□□□□□ -1.73
Sh3rf1Q69ZI1 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
Sh3rf1Q69ZI1 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC4.24□□□□□ -1.73
Sh3rf1Q69ZI1 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Sh3rf1Q69ZI1 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
Sh3rf1Q69ZI1 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
Sh3rf1Q69ZI1 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Sh3rf1Q69ZI1 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
Sh3rf1Q69ZI1 Mir465b-1-201ENSMUST00000103940 79 ntBASIC4.23□□□□□ -1.73
Sh3rf1Q69ZI1 Gm26367-201ENSMUST00000104165 132 ntBASIC4.23□□□□□ -1.73
Sh3rf1Q69ZI1 Gm24067-201ENSMUST00000104514 85 ntBASIC4.23□□□□□ -1.73
Sh3rf1Q69ZI1 Mir465b-2-201ENSMUST00000104662 79 ntBASIC4.23□□□□□ -1.73
Sh3rf1Q69ZI1 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC4.23□□□□□ -1.73
Sh3rf1Q69ZI1 Gm15926-201ENSMUST00000120492 550 ntBASIC4.23□□□□□ -1.73
Sh3rf1Q69ZI1 Gm14810-201ENSMUST00000121628 486 ntBASIC4.23□□□□□ -1.73
Sh3rf1Q69ZI1 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC4.23□□□□□ -1.73
Sh3rf1Q69ZI1 Gm22315-201ENSMUST00000158010 143 ntBASIC4.23□□□□□ -1.73
Sh3rf1Q69ZI1 Gm19503-201ENSMUST00000187109 241 ntBASIC4.23□□□□□ -1.73
Sh3rf1Q69ZI1 Gm29022-201ENSMUST00000190702 225 ntBASIC4.23□□□□□ -1.73
Sh3rf1Q69ZI1 Igkv9-128-201ENSMUST00000196602 353 ntBASIC4.23□□□□□ -1.73
Sh3rf1Q69ZI1 Gm18341-201ENSMUST00000197538 622 ntBASIC4.23□□□□□ -1.73
Sh3rf1Q69ZI1 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Sh3rf1Q69ZI1 Gm32222-201ENSMUST00000203296 298 ntBASIC4.23□□□□□ -1.73
Sh3rf1Q69ZI1 AC133598.4-202ENSMUST00000225267 469 ntBASIC4.23□□□□□ -1.73
Sh3rf1Q69ZI1 AC164304.1-201ENSMUST00000226920 272 ntBASIC4.23□□□□□ -1.73
Sh3rf1Q69ZI1 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC4.23□□□□□ -1.73
Sh3rf1Q69ZI1 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Sh3rf1Q69ZI1 Gm37868-201ENSMUST00000195578 2735 ntBASIC4.23□□□□□ -1.73
Sh3rf1Q69ZI1 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Sh3rf1Q69ZI1 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Sh3rf1Q69ZI1 Gm10033-201ENSMUST00000072427 1813 ntBASIC4.23□□□□□ -1.73
Sh3rf1Q69ZI1 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Sh3rf1Q69ZI1 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Sh3rf1Q69ZI1 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
Sh3rf1Q69ZI1 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Sh3rf1Q69ZI1 Gm21033-201ENSMUST00000208590 2608 ntBASIC4.22□□□□□ -1.73
Sh3rf1Q69ZI1 Gm9343-201ENSMUST00000209016 2609 ntBASIC4.22□□□□□ -1.73
Sh3rf1Q69ZI1 Gm24987-201ENSMUST00000104453 134 ntBASIC4.22□□□□□ -1.73
Sh3rf1Q69ZI1 Gm11367-201ENSMUST00000117802 120 ntBASIC4.22□□□□□ -1.73
Sh3rf1Q69ZI1 Gm15263-201ENSMUST00000121556 642 ntBASIC4.22□□□□□ -1.73
Sh3rf1Q69ZI1 Gm25637-201ENSMUST00000157529 107 ntBASIC4.22□□□□□ -1.73
Sh3rf1Q69ZI1 Gm23640-201ENSMUST00000157860 104 ntBASIC4.22□□□□□ -1.73
Sh3rf1Q69ZI1 Mir5129-201ENSMUST00000174938 78 ntBASIC4.22□□□□□ -1.73
Sh3rf1Q69ZI1 Mir5134-201ENSMUST00000175529 78 ntBASIC4.22□□□□□ -1.73
Sh3rf1Q69ZI1 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC4.22□□□□□ -1.73
Sh3rf1Q69ZI1 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC4.22□□□□□ -1.73
Sh3rf1Q69ZI1 AC133189.2-201ENSMUST00000228527 392 ntBASIC4.22□□□□□ -1.73
Sh3rf1Q69ZI1 Gm26449-201ENSMUST00000082452 104 ntBASIC4.22□□□□□ -1.73
Sh3rf1Q69ZI1 Snord21-201ENSMUST00000082519 94 ntBASIC4.22□□□□□ -1.73
Sh3rf1Q69ZI1 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Sh3rf1Q69ZI1 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
Sh3rf1Q69ZI1 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Sh3rf1Q69ZI1 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Sh3rf1Q69ZI1 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms