Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Gm44666-201ENSMUST00000208544 391 ntBASIC0.63□□□□□ -2.31
Trav4-3A0A0B4J1K1 AC141642.1-201ENSMUST00000220598 229 ntBASIC0.63□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
Trav4-3A0A0B4J1K1 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
Trav4-3A0A0B4J1K1 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm13502-201ENSMUST00000121574 684 ntBASIC0.62□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm25391-201ENSMUST00000157342 134 ntBASIC0.62□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm22099-201ENSMUST00000157925 123 ntBASIC0.62□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm25333-201ENSMUST00000158035 246 ntBASIC0.62□□□□□ -2.31
Trav4-3A0A0B4J1K1 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC0.62□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm25730-201ENSMUST00000178753 165 ntBASIC0.62□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm29397-201ENSMUST00000185205 333 ntBASIC0.62□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm38323-201ENSMUST00000192450 210 ntBASIC0.62□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm44301-201ENSMUST00000200362 143 ntBASIC0.62□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm44844-201ENSMUST00000207242 336 ntBASIC0.62□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm45654-201ENSMUST00000210980 123 ntBASIC0.62□□□□□ -2.31
Trav4-3A0A0B4J1K1 AC126275.1-201ENSMUST00000224881 446 ntBASIC0.62□□□□□ -2.31
Trav4-3A0A0B4J1K1 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
Trav4-3A0A0B4J1K1 n-R5s50-201ENSMUST00000083168 111 ntBASIC0.62□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm22293-201ENSMUST00000083314 109 ntBASIC0.62□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm45461-201ENSMUST00000211726 4535 ntBASIC0.61□□□□□ -2.31
Trav4-3A0A0B4J1K1 Mir667-201ENSMUST00000102441 92 ntBASIC0.61□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm25068-201ENSMUST00000103895 110 ntBASIC0.61□□□□□ -2.31
Trav4-3A0A0B4J1K1 n-R5s67-201ENSMUST00000104336 114 ntBASIC0.61□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm22544-201ENSMUST00000104349 127 ntBASIC0.61□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm16383-201ENSMUST00000118122 232 ntBASIC0.61□□□□□ -2.31
Trav4-3A0A0B4J1K1 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC0.61□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm14360-201ENSMUST00000120670 393 ntBASIC0.61□□□□□ -2.31
Trav4-3A0A0B4J1K1 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm7953-201ENSMUST00000168278 469 ntBASIC0.61□□□□□ -2.31
Trav4-3A0A0B4J1K1 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC0.61□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm25642-201ENSMUST00000175137 66 ntBASIC0.61□□□□□ -2.31
Trav4-3A0A0B4J1K1 Mir7226-201ENSMUST00000184953 60 ntBASIC0.61□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm28466-201ENSMUST00000190678 659 ntBASIC0.61□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC0.61□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm43124-201ENSMUST00000201878 278 ntBASIC0.61□□□□□ -2.31
Trav4-3A0A0B4J1K1 AC132104.1-201ENSMUST00000213615 260 ntBASIC0.61□□□□□ -2.31
Trav4-3A0A0B4J1K1 AC160970.1-201ENSMUST00000219311 475 ntBASIC0.61□□□□□ -2.31
Trav4-3A0A0B4J1K1 CT030687.1-201ENSMUST00000221854 162 ntBASIC0.61□□□□□ -2.31
Trav4-3A0A0B4J1K1 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC0.61□□□□□ -2.31
Trav4-3A0A0B4J1K1 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
Trav4-3A0A0B4J1K1 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm42635-201ENSMUST00000200266 2571 ntBASIC0.61□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm37061-201ENSMUST00000195066 3243 ntBASIC0.61□□□□□ -2.31
Trav4-3A0A0B4J1K1 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC0.61□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm15088-201ENSMUST00000117973 1508 ntBASIC0.6□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm15098-201ENSMUST00000119036 1508 ntBASIC0.6□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm15443-201ENSMUST00000118947 820 ntBASIC0.6□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm14363-201ENSMUST00000122304 409 ntBASIC0.6□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm24632-201ENSMUST00000122770 323 ntBASIC0.6□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC0.6□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm23083-201ENSMUST00000157851 116 ntBASIC0.6□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm24394-201ENSMUST00000158141 123 ntBASIC0.6□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm26029-201ENSMUST00000158659 132 ntBASIC0.6□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm25831-201ENSMUST00000158924 163 ntBASIC0.6□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC0.6□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm27640-201ENSMUST00000184580 147 ntBASIC0.6□□□□□ -2.31
Trav4-3A0A0B4J1K1 Mir7028-201ENSMUST00000185016 64 ntBASIC0.6□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm45366-201ENSMUST00000209828 384 ntBASIC0.6□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm45456-201ENSMUST00000210841 243 ntBASIC0.6□□□□□ -2.31
Trav4-3A0A0B4J1K1 CT030194.2-201ENSMUST00000225752 379 ntBASIC0.6□□□□□ -2.31
Trav4-3A0A0B4J1K1 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC0.6□□□□□ -2.31
Trav4-3A0A0B4J1K1 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm24917-201ENSMUST00000083935 104 ntBASIC0.6□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm19074-201ENSMUST00000218915 1429 ntBASIC0.6□□□□□ -2.31
Trav4-3A0A0B4J1K1 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
Trav4-3A0A0B4J1K1 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC0.6□□□□□ -2.31
Trav4-3A0A0B4J1K1 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
Trav4-3A0A0B4J1K1 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm15312-201ENSMUST00000118827 271 ntBASIC0.59□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm14366-201ENSMUST00000121970 730 ntBASIC0.59□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm16218-201ENSMUST00000155424 388 ntBASIC0.59□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm23137-201ENSMUST00000157559 107 ntBASIC0.59□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm22803-201ENSMUST00000158049 283 ntBASIC0.59□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC0.59□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC0.59□□□□□ -2.31
Trav4-3A0A0B4J1K1 CT572985.2-201ENSMUST00000220496 211 ntBASIC0.59□□□□□ -2.31
Trav4-3A0A0B4J1K1 AC173482.2-201ENSMUST00000224044 750 ntBASIC0.59□□□□□ -2.31
Trav4-3A0A0B4J1K1 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm25079-201ENSMUST00000082529 203 ntBASIC0.59□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm23299-201ENSMUST00000082708 79 ntBASIC0.59□□□□□ -2.31
Trav4-3A0A0B4J1K1 Mir125b-2-201ENSMUST00000083538 71 ntBASIC0.59□□□□□ -2.31
Trav4-3A0A0B4J1K1 Mir219a-2-201ENSMUST00000083551 97 ntBASIC0.59□□□□□ -2.31
Trav4-3A0A0B4J1K1 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC0.59□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm44114-201ENSMUST00000203270 2727 ntBASIC0.58□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm11891-201ENSMUST00000121241 619 ntBASIC0.58□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm11344-201ENSMUST00000122011 335 ntBASIC0.58□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC0.58□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC0.58□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC0.58□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC0.58□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm23704-201ENSMUST00000158844 340 ntBASIC0.58□□□□□ -2.32
Trav4-3A0A0B4J1K1 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
Trav4-3A0A0B4J1K1 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC0.58□□□□□ -2.32
Trav4-3A0A0B4J1K1 Mir3086-201ENSMUST00000175072 87 ntBASIC0.58□□□□□ -2.32
Trav4-3A0A0B4J1K1 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC0.58□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms