Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Mir325-201ENSMUST00000083491 98 ntBASIC4.93□□□□□ -1.62
Col17a1Q07563 Snord38a-201ENSMUST00000083746 71 ntBASIC4.93□□□□□ -1.62
Col17a1Q07563 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Col17a1Q07563 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Col17a1Q07563 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Col17a1Q07563 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Col17a1Q07563 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC4.93□□□□□ -1.62
Col17a1Q07563 AC157570.1-201ENSMUST00000218052 3778 ntBASIC4.93□□□□□ -1.62
Col17a1Q07563 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
Col17a1Q07563 Gm43736-201ENSMUST00000196377 2281 ntBASIC4.92□□□□□ -1.62
Col17a1Q07563 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC4.92□□□□□ -1.62
Col17a1Q07563 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC4.92□□□□□ -1.62
Col17a1Q07563 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Col17a1Q07563 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC4.92□□□□□ -1.62
Col17a1Q07563 Gm7327-201ENSMUST00000120925 652 ntBASIC4.92□□□□□ -1.62
Col17a1Q07563 Gm6565-201ENSMUST00000121217 438 ntBASIC4.92□□□□□ -1.62
Col17a1Q07563 Gm11344-201ENSMUST00000122011 335 ntBASIC4.92□□□□□ -1.62
Col17a1Q07563 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Col17a1Q07563 Gm25113-201ENSMUST00000157185 143 ntBASIC4.92□□□□□ -1.62
Col17a1Q07563 Mir5624-201ENSMUST00000176635 61 ntBASIC4.92□□□□□ -1.62
Col17a1Q07563 Gm18551-201ENSMUST00000195594 642 ntBASIC4.92□□□□□ -1.62
Col17a1Q07563 Gm38088-201ENSMUST00000195829 241 ntBASIC4.92□□□□□ -1.62
Col17a1Q07563 AC069074.2-201ENSMUST00000217819 428 ntBASIC4.92□□□□□ -1.62
Col17a1Q07563 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC4.92□□□□□ -1.62
Col17a1Q07563 Gm20102-201ENSMUST00000222445 220 ntBASIC4.92□□□□□ -1.62
Col17a1Q07563 CT025689.4-201ENSMUST00000225926 601 ntBASIC4.92□□□□□ -1.62
Col17a1Q07563 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Col17a1Q07563 Gm26447-201ENSMUST00000082448 129 ntBASIC4.92□□□□□ -1.62
Col17a1Q07563 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Col17a1Q07563 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
Col17a1Q07563 Gm44150-201ENSMUST00000203317 2619 ntBASIC4.91□□□□□ -1.62
Col17a1Q07563 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Col17a1Q07563 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Col17a1Q07563 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC4.91□□□□□ -1.62
Col17a1Q07563 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Col17a1Q07563 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Col17a1Q07563 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Col17a1Q07563 Gm15147-201ENSMUST00000122263 483 ntBASIC4.91□□□□□ -1.62
Col17a1Q07563 Gm23016-201ENSMUST00000158431 62 ntBASIC4.91□□□□□ -1.62
Col17a1Q07563 Snora15-201ENSMUST00000177461 131 ntBASIC4.91□□□□□ -1.62
Col17a1Q07563 Gm27585-201ENSMUST00000183717 199 ntBASIC4.91□□□□□ -1.62
Col17a1Q07563 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC4.91□□□□□ -1.62
Col17a1Q07563 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC4.91□□□□□ -1.62
Col17a1Q07563 Gm46997-201ENSMUST00000222108 217 ntBASIC4.91□□□□□ -1.62
Col17a1Q07563 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC4.91□□□□□ -1.62
Col17a1Q07563 AC162934.1-201ENSMUST00000222880 309 ntBASIC4.91□□□□□ -1.62
Col17a1Q07563 AC115289.1-201ENSMUST00000224915 522 ntBASIC4.91□□□□□ -1.62
Col17a1Q07563 Gm25929-201ENSMUST00000082784 107 ntBASIC4.91□□□□□ -1.62
Col17a1Q07563 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
Col17a1Q07563 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Col17a1Q07563 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Col17a1Q07563 AC147615.2-201ENSMUST00000219876 2154 ntBASIC4.91□□□□□ -1.62
Col17a1Q07563 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.62
Col17a1Q07563 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Col17a1Q07563 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC4.9□□□□□ -1.62
Col17a1Q07563 Gm37652-201ENSMUST00000195290 2095 ntBASIC4.9□□□□□ -1.62
Col17a1Q07563 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Col17a1Q07563 Gm25915-201ENSMUST00000104265 126 ntBASIC4.9□□□□□ -1.62
Col17a1Q07563 Gm13378-201ENSMUST00000117483 336 ntBASIC4.9□□□□□ -1.62
Col17a1Q07563 Gm15223-201ENSMUST00000120989 826 ntBASIC4.9□□□□□ -1.62
Col17a1Q07563 Gm24750-201ENSMUST00000157843 104 ntBASIC4.9□□□□□ -1.62
Col17a1Q07563 Gm24436-201ENSMUST00000157889 302 ntBASIC4.9□□□□□ -1.62
Col17a1Q07563 Gm24875-201ENSMUST00000158888 104 ntBASIC4.9□□□□□ -1.62
Col17a1Q07563 Gm16318-201ENSMUST00000162402 601 ntBASIC4.9□□□□□ -1.62
Col17a1Q07563 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC4.9□□□□□ -1.62
Col17a1Q07563 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC4.9□□□□□ -1.62
Col17a1Q07563 Gm43070-201ENSMUST00000196938 415 ntBASIC4.9□□□□□ -1.62
Col17a1Q07563 Gm43925-201ENSMUST00000203498 206 ntBASIC4.9□□□□□ -1.62
Col17a1Q07563 Gm44521-201ENSMUST00000206469 217 ntBASIC4.9□□□□□ -1.62
Col17a1Q07563 Gm45735-201ENSMUST00000212779 319 ntBASIC4.9□□□□□ -1.62
Col17a1Q07563 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.62
Col17a1Q07563 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC4.9□□□□□ -1.62
Col17a1Q07563 Gm18921-201ENSMUST00000221798 366 ntBASIC4.9□□□□□ -1.62
Col17a1Q07563 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Col17a1Q07563 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
Col17a1Q07563 Gm45223-201ENSMUST00000207037 5138 ntBASIC4.9□□□□□ -1.63
Col17a1Q07563 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Col17a1Q07563 Gm37970-201ENSMUST00000193865 1732 ntBASIC4.89□□□□□ -1.63
Col17a1Q07563 Gm44283-201ENSMUST00000204461 3950 ntBASIC4.89□□□□□ -1.63
Col17a1Q07563 Gm14292-201ENSMUST00000118761 456 ntBASIC4.89□□□□□ -1.63
Col17a1Q07563 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC4.89□□□□□ -1.63
Col17a1Q07563 Gm23592-201ENSMUST00000157859 117 ntBASIC4.89□□□□□ -1.63
Col17a1Q07563 Gm24499-201ENSMUST00000158446 104 ntBASIC4.89□□□□□ -1.63
Col17a1Q07563 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
Col17a1Q07563 Gm7958-201ENSMUST00000178255 468 ntBASIC4.89□□□□□ -1.63
Col17a1Q07563 Gm7950-201ENSMUST00000179633 468 ntBASIC4.89□□□□□ -1.63
Col17a1Q07563 Gm28146-201ENSMUST00000185517 701 ntBASIC4.89□□□□□ -1.63
Col17a1Q07563 Gm29366-201ENSMUST00000190481 699 ntBASIC4.89□□□□□ -1.63
Col17a1Q07563 Mir7682-201ENSMUST00000198467 58 ntBASIC4.89□□□□□ -1.63
Col17a1Q07563 Gm45616-201ENSMUST00000211711 319 ntBASIC4.89□□□□□ -1.63
Col17a1Q07563 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Col17a1Q07563 Gm22572-201ENSMUST00000082985 105 ntBASIC4.89□□□□□ -1.63
Col17a1Q07563 Gm26176-201ENSMUST00000083795 105 ntBASIC4.89□□□□□ -1.63
Col17a1Q07563 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC4.89□□□□□ -1.63
Col17a1Q07563 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
Col17a1Q07563 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Col17a1Q07563 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Col17a1Q07563 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
Col17a1Q07563 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col17a1Q07563 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 159.4 ms