Protein–RNA interactions for Protein: P28357

Hoxd9, Homeobox protein Hox-D9, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd9P28357 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC4.29□□□□□ -1.72
Hoxd9P28357 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC4.29□□□□□ -1.72
Hoxd9P28357 AC122242.1-201ENSMUST00000224650 304 ntBASIC4.29□□□□□ -1.72
Hoxd9P28357 Apoo-ps-201ENSMUST00000061241 586 ntBASIC4.29□□□□□ -1.72
Hoxd9P28357 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Hoxd9P28357 Gm42843-201ENSMUST00000196328 3616 ntBASIC4.29□□□□□ -1.72
Hoxd9P28357 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Hoxd9P28357 Gm8989-201ENSMUST00000184782 7275 ntBASIC4.29□□□□□ -1.72
Hoxd9P28357 AC155921.1-201ENSMUST00000216568 3841 ntBASIC4.29□□□□□ -1.72
Hoxd9P28357 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
Hoxd9P28357 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Hoxd9P28357 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Hoxd9P28357 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Hoxd9P28357 Gm4746-201ENSMUST00000120395 2406 ntBASIC4.29□□□□□ -1.72
Hoxd9P28357 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Hoxd9P28357 Gm44321-201ENSMUST00000204262 2855 ntBASIC4.28□□□□□ -1.72
Hoxd9P28357 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Hoxd9P28357 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Hoxd9P28357 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Hoxd9P28357 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Hoxd9P28357 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Hoxd9P28357 Gm45804-201ENSMUST00000212137 3435 ntBASIC4.28□□□□□ -1.72
Hoxd9P28357 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
Hoxd9P28357 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Hoxd9P28357 Gm22473-201ENSMUST00000104114 132 ntBASIC4.28□□□□□ -1.72
Hoxd9P28357 Gm14107-201ENSMUST00000117774 330 ntBASIC4.28□□□□□ -1.72
Hoxd9P28357 Gm14878-201ENSMUST00000118167 293 ntBASIC4.28□□□□□ -1.72
Hoxd9P28357 Gm15183-201ENSMUST00000118933 348 ntBASIC4.28□□□□□ -1.72
Hoxd9P28357 Gm14845-201ENSMUST00000121259 306 ntBASIC4.28□□□□□ -1.72
Hoxd9P28357 Gm14500-201ENSMUST00000121647 113 ntBASIC4.28□□□□□ -1.72
Hoxd9P28357 Gm26275-201ENSMUST00000157101 268 ntBASIC4.28□□□□□ -1.72
Hoxd9P28357 Gm27761-201ENSMUST00000184091 131 ntBASIC4.28□□□□□ -1.72
Hoxd9P28357 Gm27875-201ENSMUST00000184425 123 ntBASIC4.28□□□□□ -1.72
Hoxd9P28357 Gm29097-201ENSMUST00000190273 422 ntBASIC4.28□□□□□ -1.72
Hoxd9P28357 Gm29218-205ENSMUST00000190846 615 ntBASIC4.28□□□□□ -1.72
Hoxd9P28357 AC156560.3-201ENSMUST00000222978 3841 ntBASIC4.28□□□□□ -1.72
Hoxd9P28357 Gm10360-201ENSMUST00000097219 272 ntBASIC4.28□□□□□ -1.72
Hoxd9P28357 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
Hoxd9P28357 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Hoxd9P28357 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Hoxd9P28357 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Hoxd9P28357 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Hoxd9P28357 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
Hoxd9P28357 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Hoxd9P28357 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Hoxd9P28357 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Hoxd9P28357 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
Hoxd9P28357 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
Hoxd9P28357 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Hoxd9P28357 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC4.27□□□□□ -1.73
Hoxd9P28357 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Hoxd9P28357 Gm36951-201ENSMUST00000193840 2687 ntBASIC4.27□□□□□ -1.73
Hoxd9P28357 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Hoxd9P28357 Gm37747-201ENSMUST00000193717 4003 ntBASIC4.27□□□□□ -1.73
Hoxd9P28357 Gm24544-201ENSMUST00000103862 110 ntBASIC4.27□□□□□ -1.73
Hoxd9P28357 Gm13737-201ENSMUST00000119793 232 ntBASIC4.27□□□□□ -1.73
Hoxd9P28357 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC4.27□□□□□ -1.73
Hoxd9P28357 Gm16218-201ENSMUST00000155424 388 ntBASIC4.27□□□□□ -1.73
Hoxd9P28357 Gm23782-201ENSMUST00000157939 120 ntBASIC4.27□□□□□ -1.73
Hoxd9P28357 Gm23260-201ENSMUST00000158317 172 ntBASIC4.27□□□□□ -1.73
Hoxd9P28357 Gm15796-201ENSMUST00000162135 204 ntBASIC4.27□□□□□ -1.73
Hoxd9P28357 Gm20526-201ENSMUST00000173416 158 ntBASIC4.27□□□□□ -1.73
Hoxd9P28357 Gm25380-201ENSMUST00000175463 107 ntBASIC4.27□□□□□ -1.73
Hoxd9P28357 Gm24641-201ENSMUST00000178055 107 ntBASIC4.27□□□□□ -1.73
Hoxd9P28357 Gm25484-201ENSMUST00000178217 107 ntBASIC4.27□□□□□ -1.73
Hoxd9P28357 Gm26138-201ENSMUST00000179236 107 ntBASIC4.27□□□□□ -1.73
Hoxd9P28357 Gm22821-201ENSMUST00000179288 107 ntBASIC4.27□□□□□ -1.73
Hoxd9P28357 Gm27564-201ENSMUST00000185196 96 ntBASIC4.27□□□□□ -1.73
Hoxd9P28357 Gm37417-201ENSMUST00000195257 454 ntBASIC4.27□□□□□ -1.73
Hoxd9P28357 Gm43735-201ENSMUST00000198245 809 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Hoxd9P28357 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Hoxd9P28357 Gm43028-201ENSMUST00000202561 481 ntBASIC4.27□□□□□ -1.73
Hoxd9P28357 Gm44371-201ENSMUST00000204148 467 ntBASIC4.27□□□□□ -1.73
Hoxd9P28357 Gm44092-201ENSMUST00000204470 258 ntBASIC4.27□□□□□ -1.73
Hoxd9P28357 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Hoxd9P28357 Gm3338-201ENSMUST00000220982 269 ntBASIC4.27□□□□□ -1.73
Hoxd9P28357 Gm23140-201ENSMUST00000082487 107 ntBASIC4.27□□□□□ -1.73
Hoxd9P28357 Gm25698-201ENSMUST00000082897 107 ntBASIC4.27□□□□□ -1.73
Hoxd9P28357 Gm23298-201ENSMUST00000083181 107 ntBASIC4.27□□□□□ -1.73
Hoxd9P28357 Gm24614-201ENSMUST00000083269 107 ntBASIC4.27□□□□□ -1.73
Hoxd9P28357 Gm22057-201ENSMUST00000083387 107 ntBASIC4.27□□□□□ -1.73
Hoxd9P28357 Gm25516-201ENSMUST00000083857 107 ntBASIC4.27□□□□□ -1.73
Hoxd9P28357 Gm23947-201ENSMUST00000093636 107 ntBASIC4.27□□□□□ -1.73
Hoxd9P28357 Gm43329-201ENSMUST00000200120 3232 ntBASIC4.27□□□□□ -1.73
Hoxd9P28357 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC4.27□□□□□ -1.73
Hoxd9P28357 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Hoxd9P28357 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Hoxd9P28357 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC4.27□□□□□ -1.73
Hoxd9P28357 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC4.26□□□□□ -1.73
Hoxd9P28357 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Hoxd9P28357 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Hoxd9P28357 AC091683.1-201ENSMUST00000222307 2446 ntBASIC4.26□□□□□ -1.73
Hoxd9P28357 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Hoxd9P28357 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Hoxd9P28357 Gm22657-201ENSMUST00000104197 132 ntBASIC4.26□□□□□ -1.73
Hoxd9P28357 Gm11673-201ENSMUST00000117846 331 ntBASIC4.26□□□□□ -1.73
Hoxd9P28357 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Hoxd9P28357 Gm2830-201ENSMUST00000140330 385 ntBASIC4.26□□□□□ -1.73
Hoxd9P28357 Gm25283-201ENSMUST00000157272 77 ntBASIC4.26□□□□□ -1.73
Hoxd9P28357 Gm24926-201ENSMUST00000178053 79 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms