Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC1.98□□□□□ -2.09
Sdc1P18828 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
Sdc1P18828 Gm14899-201ENSMUST00000118673 548 ntBASIC1.98□□□□□ -2.09
Sdc1P18828 Gm15183-201ENSMUST00000118933 348 ntBASIC1.98□□□□□ -2.09
Sdc1P18828 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC1.98□□□□□ -2.09
Sdc1P18828 Gm16588-201ENSMUST00000162889 355 ntBASIC1.98□□□□□ -2.09
Sdc1P18828 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Sdc1P18828 Gm17166-201ENSMUST00000172006 431 ntBASIC1.98□□□□□ -2.09
Sdc1P18828 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC1.98□□□□□ -2.09
Sdc1P18828 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC1.98□□□□□ -2.09
Sdc1P18828 Gm3852-201ENSMUST00000182781 264 ntBASIC1.98□□□□□ -2.09
Sdc1P18828 Gm28591-201ENSMUST00000185259 183 ntBASIC1.98□□□□□ -2.09
Sdc1P18828 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC1.98□□□□□ -2.09
Sdc1P18828 Gm29604-201ENSMUST00000187176 163 ntBASIC1.98□□□□□ -2.09
Sdc1P18828 Gm28466-201ENSMUST00000190678 659 ntBASIC1.98□□□□□ -2.09
Sdc1P18828 Gm36984-201ENSMUST00000192770 235 ntBASIC1.98□□□□□ -2.09
Sdc1P18828 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC1.98□□□□□ -2.09
Sdc1P18828 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
Sdc1P18828 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC1.98□□□□□ -2.09
Sdc1P18828 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC1.98□□□□□ -2.09
Sdc1P18828 Gm18160-201ENSMUST00000214279 827 ntBASIC1.98□□□□□ -2.09
Sdc1P18828 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC1.98□□□□□ -2.09
Sdc1P18828 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC1.98□□□□□ -2.09
Sdc1P18828 CT009550.5-201ENSMUST00000226286 382 ntBASIC1.98□□□□□ -2.09
Sdc1P18828 Gm22443-201ENSMUST00000082890 107 ntBASIC1.98□□□□□ -2.09
Sdc1P18828 Mir16-2-201ENSMUST00000083672 95 ntBASIC1.98□□□□□ -2.09
Sdc1P18828 Gm26327-201ENSMUST00000093724 111 ntBASIC1.98□□□□□ -2.09
Sdc1P18828 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Sdc1P18828 Gm37143-201ENSMUST00000195180 3259 ntBASIC1.97□□□□□ -2.09
Sdc1P18828 Gm37598-201ENSMUST00000194506 1301 ntBASIC1.97□□□□□ -2.09
Sdc1P18828 Gm14429-201ENSMUST00000121881 2024 ntBASIC1.97□□□□□ -2.09
Sdc1P18828 Gm25764-201ENSMUST00000104092 134 ntBASIC1.97□□□□□ -2.09
Sdc1P18828 Gm12765-201ENSMUST00000117273 615 ntBASIC1.97□□□□□ -2.09
Sdc1P18828 Gm14770-201ENSMUST00000122197 312 ntBASIC1.97□□□□□ -2.09
Sdc1P18828 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
Sdc1P18828 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC1.97□□□□□ -2.09
Sdc1P18828 Gm24291-201ENSMUST00000157633 162 ntBASIC1.97□□□□□ -2.09
Sdc1P18828 Gm24198-201ENSMUST00000157812 108 ntBASIC1.97□□□□□ -2.09
Sdc1P18828 Gm24190-201ENSMUST00000157976 216 ntBASIC1.97□□□□□ -2.09
Sdc1P18828 Gm24210-201ENSMUST00000158263 133 ntBASIC1.97□□□□□ -2.09
Sdc1P18828 Gm25977-201ENSMUST00000158697 85 ntBASIC1.97□□□□□ -2.09
Sdc1P18828 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC1.97□□□□□ -2.09
Sdc1P18828 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC1.97□□□□□ -2.09
Sdc1P18828 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Sdc1P18828 Gm25361-201ENSMUST00000179358 76 ntBASIC1.97□□□□□ -2.09
Sdc1P18828 Gm28825-201ENSMUST00000186233 238 ntBASIC1.97□□□□□ -2.09
Sdc1P18828 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC1.97□□□□□ -2.09
Sdc1P18828 Gm32381-201ENSMUST00000203192 476 ntBASIC1.97□□□□□ -2.09
Sdc1P18828 Gm45382-201ENSMUST00000210607 151 ntBASIC1.97□□□□□ -2.09
Sdc1P18828 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC1.97□□□□□ -2.09
Sdc1P18828 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
Sdc1P18828 AC138401.1-201ENSMUST00000221533 116 ntBASIC1.97□□□□□ -2.09
Sdc1P18828 CT030166.2-201ENSMUST00000222021 368 ntBASIC1.97□□□□□ -2.09
Sdc1P18828 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Sdc1P18828 Gm22810-201ENSMUST00000082741 158 ntBASIC1.97□□□□□ -2.09
Sdc1P18828 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Sdc1P18828 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
Sdc1P18828 Gm3081-201ENSMUST00000193413 3025 ntBASIC1.97□□□□□ -2.09
Sdc1P18828 Gm36989-201ENSMUST00000193225 2160 ntBASIC1.96□□□□□ -2.1
Sdc1P18828 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Sdc1P18828 Gm24430-201ENSMUST00000104077 104 ntBASIC1.96□□□□□ -2.1
Sdc1P18828 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC1.96□□□□□ -2.1
Sdc1P18828 Gm14588-201ENSMUST00000119895 172 ntBASIC1.96□□□□□ -2.1
Sdc1P18828 Gm15719-201ENSMUST00000120619 635 ntBASIC1.96□□□□□ -2.1
Sdc1P18828 Gm13602-201ENSMUST00000122405 493 ntBASIC1.96□□□□□ -2.1
Sdc1P18828 Gm24905-201ENSMUST00000158129 104 ntBASIC1.96□□□□□ -2.1
Sdc1P18828 Gm24212-201ENSMUST00000158258 132 ntBASIC1.96□□□□□ -2.1
Sdc1P18828 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC1.96□□□□□ -2.1
Sdc1P18828 Gm23568-201ENSMUST00000177960 92 ntBASIC1.96□□□□□ -2.1
Sdc1P18828 Gm24829-201ENSMUST00000179245 92 ntBASIC1.96□□□□□ -2.1
Sdc1P18828 Gm24464-201ENSMUST00000179697 107 ntBASIC1.96□□□□□ -2.1
Sdc1P18828 Mir6370-201ENSMUST00000183510 120 ntBASIC1.96□□□□□ -2.1
Sdc1P18828 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC1.96□□□□□ -2.1
Sdc1P18828 Gm29216-201ENSMUST00000187117 492 ntBASIC1.96□□□□□ -2.1
Sdc1P18828 Gm28299-201ENSMUST00000189908 339 ntBASIC1.96□□□□□ -2.1
Sdc1P18828 Gm37557-201ENSMUST00000191640 139 ntBASIC1.96□□□□□ -2.1
Sdc1P18828 Gm37000-201ENSMUST00000193058 428 ntBASIC1.96□□□□□ -2.1
Sdc1P18828 Gm38238-201ENSMUST00000194334 346 ntBASIC1.96□□□□□ -2.1
Sdc1P18828 Gm33354-201ENSMUST00000195448 906 ntBASIC1.96□□□□□ -2.1
Sdc1P18828 Gm42739-201ENSMUST00000200687 226 ntBASIC1.96□□□□□ -2.1
Sdc1P18828 Gm36776-201ENSMUST00000207006 203 ntBASIC1.96□□□□□ -2.1
Sdc1P18828 Gm45590-201ENSMUST00000209715 262 ntBASIC1.96□□□□□ -2.1
Sdc1P18828 Gm45879-201ENSMUST00000212521 392 ntBASIC1.96□□□□□ -2.1
Sdc1P18828 AL929265.1-201ENSMUST00000213427 125 ntBASIC1.96□□□□□ -2.1
Sdc1P18828 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC1.96□□□□□ -2.1
Sdc1P18828 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC1.96□□□□□ -2.1
Sdc1P18828 CT025606.1-201ENSMUST00000218273 324 ntBASIC1.96□□□□□ -2.1
Sdc1P18828 Gm7065-201ENSMUST00000222150 474 ntBASIC1.96□□□□□ -2.1
Sdc1P18828 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
Sdc1P18828 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
Sdc1P18828 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Sdc1P18828 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Sdc1P18828 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC1.96□□□□□ -2.1
Sdc1P18828 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Sdc1P18828 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Sdc1P18828 Gm15314-201ENSMUST00000120740 1887 ntBASIC1.96□□□□□ -2.1
Sdc1P18828 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Sdc1P18828 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC1.96□□□□□ -2.1
Sdc1P18828 Gm22939-201ENSMUST00000103958 131 ntBASIC1.95□□□□□ -2.1
Sdc1P18828 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 135.9 ms