Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Gm22264-201ENSMUST00000178200 107 ntBASIC0.67□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
Trav4-3A0A0B4J1K1 Mir6926-201ENSMUST00000184562 68 ntBASIC0.67□□□□□ -2.3
Trav4-3A0A0B4J1K1 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC0.67□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm27959-201ENSMUST00000185172 111 ntBASIC0.67□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC0.67□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm43652-201ENSMUST00000196219 675 ntBASIC0.67□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm43493-201ENSMUST00000199837 202 ntBASIC0.67□□□□□ -2.3
Trav4-3A0A0B4J1K1 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC0.67□□□□□ -2.3
Trav4-3A0A0B4J1K1 AC101945.3-201ENSMUST00000226568 153 ntBASIC0.67□□□□□ -2.3
Trav4-3A0A0B4J1K1 Mir92-2-201ENSMUST00000083679 91 ntBASIC0.67□□□□□ -2.3
Trav4-3A0A0B4J1K1 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm381-201ENSMUST00000117443 2037 ntBASIC0.67□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC0.66□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm13903-201ENSMUST00000120945 193 ntBASIC0.66□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC0.66□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC0.66□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC0.66□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm26157-201ENSMUST00000158974 126 ntBASIC0.66□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm25748-201ENSMUST00000175487 70 ntBASIC0.66□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC0.66□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm44657-201ENSMUST00000208568 450 ntBASIC0.66□□□□□ -2.3
Trav4-3A0A0B4J1K1 AC113031.5-201ENSMUST00000227116 606 ntBASIC0.66□□□□□ -2.3
Trav4-3A0A0B4J1K1 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
Trav4-3A0A0B4J1K1 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
Trav4-3A0A0B4J1K1 Olfr1472-201ENSMUST00000077501 945 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
Trav4-3A0A0B4J1K1 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.3
Trav4-3A0A0B4J1K1 Gm24431-201ENSMUST00000104073 66 ntBASIC0.65□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm14795-201ENSMUST00000118461 471 ntBASIC0.65□□□□□ -2.31
Trav4-3A0A0B4J1K1 Defa-ps8-201ENSMUST00000120972 279 ntBASIC0.65□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm6956-201ENSMUST00000134724 546 ntBASIC0.65□□□□□ -2.31
Trav4-3A0A0B4J1K1 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC0.65□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm6182-201ENSMUST00000156439 1208 ntBASIC0.65□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm4540-201ENSMUST00000170669 429 ntBASIC0.65□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm24020-201ENSMUST00000180156 108 ntBASIC0.65□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm27161-201ENSMUST00000183960 562 ntBASIC0.65□□□□□ -2.31
Trav4-3A0A0B4J1K1 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC0.65□□□□□ -2.31
Trav4-3A0A0B4J1K1 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC0.65□□□□□ -2.31
Trav4-3A0A0B4J1K1 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC0.65□□□□□ -2.31
Trav4-3A0A0B4J1K1 Mir378a-201ENSMUST00000198300 66 ntBASIC0.65□□□□□ -2.31
Trav4-3A0A0B4J1K1 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC0.65□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm18854-201ENSMUST00000211196 329 ntBASIC0.65□□□□□ -2.31
Trav4-3A0A0B4J1K1 AC161250.1-201ENSMUST00000213426 1111 ntBASIC0.65□□□□□ -2.31
Trav4-3A0A0B4J1K1 AC151843.1-201ENSMUST00000215960 691 ntBASIC0.65□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm9068-201ENSMUST00000217393 455 ntBASIC0.65□□□□□ -2.31
Trav4-3A0A0B4J1K1 AC153532.1-201ENSMUST00000218126 1111 ntBASIC0.65□□□□□ -2.31
Trav4-3A0A0B4J1K1 Mir22-201ENSMUST00000083595 95 ntBASIC0.65□□□□□ -2.31
Trav4-3A0A0B4J1K1 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC0.64□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm44562-201ENSMUST00000207194 1347 ntBASIC0.64□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm11784-201ENSMUST00000118568 474 ntBASIC0.64□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC0.64□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm25332-201ENSMUST00000158038 105 ntBASIC0.64□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm23897-201ENSMUST00000158110 158 ntBASIC0.64□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm25836-201ENSMUST00000158918 123 ntBASIC0.64□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm17162-201ENSMUST00000168538 473 ntBASIC0.64□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm20794-201ENSMUST00000177626 628 ntBASIC0.64□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC0.64□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC0.64□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC0.64□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm22129-201ENSMUST00000179034 107 ntBASIC0.64□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC0.64□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC0.64□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC0.64□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC0.64□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC0.64□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC0.64□□□□□ -2.31
Trav4-3A0A0B4J1K1 Mir7063-201ENSMUST00000184158 91 ntBASIC0.64□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm28356-202ENSMUST00000187566 858 ntBASIC0.64□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm20885-201ENSMUST00000190192 654 ntBASIC0.64□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm33571-201ENSMUST00000193271 657 ntBASIC0.64□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm36866-201ENSMUST00000193343 657 ntBASIC0.64□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm36047-201ENSMUST00000193659 657 ntBASIC0.64□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm20857-201ENSMUST00000194766 657 ntBASIC0.64□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm20858-201ENSMUST00000195459 657 ntBASIC0.64□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm30638-201ENSMUST00000195570 656 ntBASIC0.64□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm17991-201ENSMUST00000208139 297 ntBASIC0.64□□□□□ -2.31
Trav4-3A0A0B4J1K1 AC131068.1-201ENSMUST00000226891 482 ntBASIC0.64□□□□□ -2.31
Trav4-3A0A0B4J1K1 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
Trav4-3A0A0B4J1K1 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC0.64□□□□□ -2.31
Trav4-3A0A0B4J1K1 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
Trav4-3A0A0B4J1K1 Mir208a-201ENSMUST00000083498 83 ntBASIC0.64□□□□□ -2.31
Trav4-3A0A0B4J1K1 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC0.64□□□□□ -2.31
Trav4-3A0A0B4J1K1 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC0.64□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm44679-201ENSMUST00000207202 2908 ntBASIC0.63□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm22689-201ENSMUST00000102452 110 ntBASIC0.63□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm23175-201ENSMUST00000104371 132 ntBASIC0.63□□□□□ -2.31
Trav4-3A0A0B4J1K1 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC0.63□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm14411-201ENSMUST00000121798 914 ntBASIC0.63□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm24358-201ENSMUST00000158424 288 ntBASIC0.63□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm9071-201ENSMUST00000165915 474 ntBASIC0.63□□□□□ -2.31
Trav4-3A0A0B4J1K1 Mir5112-201ENSMUST00000174897 60 ntBASIC0.63□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
Trav4-3A0A0B4J1K1 Gm23933-201ENSMUST00000178405 79 ntBASIC0.63□□□□□ -2.31
Trav4-3A0A0B4J1K1 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms