Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Trim35Q8C006 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Trim35Q8C006 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Trim35Q8C006 Gm11790-201ENSMUST00000119569 455 ntBASIC5.69□□□□□ -1.5
Trim35Q8C006 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Trim35Q8C006 Gm22319-201ENSMUST00000157147 122 ntBASIC5.69□□□□□ -1.5
Trim35Q8C006 Gm23171-201ENSMUST00000157159 264 ntBASIC5.69□□□□□ -1.5
Trim35Q8C006 Gm22963-201ENSMUST00000157960 91 ntBASIC5.69□□□□□ -1.5
Trim35Q8C006 Gm26169-201ENSMUST00000158420 135 ntBASIC5.69□□□□□ -1.5
Trim35Q8C006 Mir3097-201ENSMUST00000175356 67 ntBASIC5.69□□□□□ -1.5
Trim35Q8C006 Gm27854-201ENSMUST00000175578 244 ntBASIC5.69□□□□□ -1.5
Trim35Q8C006 Gm25449-201ENSMUST00000179389 79 ntBASIC5.69□□□□□ -1.5
Trim35Q8C006 Gm29736-201ENSMUST00000198189 385 ntBASIC5.69□□□□□ -1.5
Trim35Q8C006 Gm33758-201ENSMUST00000199230 407 ntTSL 3 BASIC5.69□□□□□ -1.5
Trim35Q8C006 mt-Ts2-201ENSMUST00000082416 59 ntBASIC5.69□□□□□ -1.5
Trim35Q8C006 Snord59a-201ENSMUST00000082844 74 ntBASIC5.69□□□□□ -1.5
Trim35Q8C006 Mir143-201ENSMUST00000083511 63 ntBASIC5.69□□□□□ -1.5
Trim35Q8C006 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC5.69□□□□□ -1.5
Trim35Q8C006 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Trim35Q8C006 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Trim35Q8C006 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC5.69□□□□□ -1.5
Trim35Q8C006 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Trim35Q8C006 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Trim35Q8C006 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Trim35Q8C006 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Trim35Q8C006 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Trim35Q8C006 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Trim35Q8C006 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Trim35Q8C006 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Trim35Q8C006 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Trim35Q8C006 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Trim35Q8C006 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
Trim35Q8C006 Gm14884-201ENSMUST00000120456 196 ntBASIC5.68□□□□□ -1.5
Trim35Q8C006 Gm37918-201ENSMUST00000192071 120 ntBASIC5.68□□□□□ -1.5
Trim35Q8C006 AC153800.1-201ENSMUST00000219212 365 ntBASIC5.68□□□□□ -1.5
Trim35Q8C006 Gm24918-201ENSMUST00000083022 130 ntBASIC5.68□□□□□ -1.5
Trim35Q8C006 Gm23686-201ENSMUST00000083241 164 ntBASIC5.68□□□□□ -1.5
Trim35Q8C006 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Trim35Q8C006 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Trim35Q8C006 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC5.68□□□□□ -1.5
Trim35Q8C006 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Trim35Q8C006 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Trim35Q8C006 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trim35Q8C006 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Trim35Q8C006 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trim35Q8C006 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Trim35Q8C006 Mir294-201ENSMUST00000104710 84 ntBASIC5.67□□□□□ -1.5
Trim35Q8C006 Gm16005-201ENSMUST00000120515 269 ntBASIC5.67□□□□□ -1.5
Trim35Q8C006 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC5.67□□□□□ -1.5
Trim35Q8C006 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC5.67□□□□□ -1.5
Trim35Q8C006 Gm23662-201ENSMUST00000158046 111 ntBASIC5.67□□□□□ -1.5
Trim35Q8C006 Gm24395-201ENSMUST00000158139 125 ntBASIC5.67□□□□□ -1.5
Trim35Q8C006 Gm24731-201ENSMUST00000158227 131 ntBASIC5.67□□□□□ -1.5
Trim35Q8C006 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC5.67□□□□□ -1.5
Trim35Q8C006 Gm8419-201ENSMUST00000189886 412 ntBASIC5.67□□□□□ -1.5
Trim35Q8C006 Gm38011-201ENSMUST00000193312 279 ntBASIC5.67□□□□□ -1.5
Trim35Q8C006 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Trim35Q8C006 AC165953.1-201ENSMUST00000226386 357 ntBASIC5.67□□□□□ -1.5
Trim35Q8C006 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
Trim35Q8C006 Mir489-201ENSMUST00000093599 107 ntBASIC5.67□□□□□ -1.5
Trim35Q8C006 AC154677.1-201ENSMUST00000227636 2805 ntBASIC5.67□□□□□ -1.5
Trim35Q8C006 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trim35Q8C006 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Trim35Q8C006 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Trim35Q8C006 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trim35Q8C006 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Trim35Q8C006 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Trim35Q8C006 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Trim35Q8C006 Gm37880-201ENSMUST00000192216 3257 ntBASIC5.66□□□□□ -1.5
Trim35Q8C006 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Trim35Q8C006 Pde1a-204ENSMUST00000102653 2439 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Trim35Q8C006 Gm6645-201ENSMUST00000118505 2726 ntBASIC5.66□□□□□ -1.5
Trim35Q8C006 Gm16270-201ENSMUST00000160327 3238 ntBASIC5.66□□□□□ -1.5
Trim35Q8C006 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
Trim35Q8C006 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Trim35Q8C006 Gm26020-201ENSMUST00000122729 183 ntBASIC5.66□□□□□ -1.5
Trim35Q8C006 Gm25826-201ENSMUST00000157090 137 ntBASIC5.66□□□□□ -1.5
Trim35Q8C006 Gm23280-201ENSMUST00000157905 139 ntBASIC5.66□□□□□ -1.5
Trim35Q8C006 Gm25264-201ENSMUST00000158519 117 ntBASIC5.66□□□□□ -1.5
Trim35Q8C006 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC5.66□□□□□ -1.5
Trim35Q8C006 Gm17511-201ENSMUST00000172206 342 ntBASIC5.66□□□□□ -1.5
Trim35Q8C006 Gm23567-201ENSMUST00000178005 107 ntBASIC5.66□□□□□ -1.5
Trim35Q8C006 AC125405.1-201ENSMUST00000226406 589 ntBASIC5.66□□□□□ -1.5
Trim35Q8C006 Gm7808-201ENSMUST00000082002 387 ntBASIC5.66□□□□□ -1.5
Trim35Q8C006 AC124456.1-201ENSMUST00000217391 2597 ntBASIC5.66□□□□□ -1.5
Trim35Q8C006 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Trim35Q8C006 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Trim35Q8C006 Gm28362-201ENSMUST00000189430 2420 ntBASIC5.66□□□□□ -1.5
Trim35Q8C006 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC5.66□□□□□ -1.5
Trim35Q8C006 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Trim35Q8C006 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Trim35Q8C006 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC5.65□□□□□ -1.5
Trim35Q8C006 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Trim35Q8C006 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Trim35Q8C006 Olfr497-202ENSMUST00000213521 2396 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
Trim35Q8C006 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC5.65□□□□□ -1.5
Trim35Q8C006 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Trim35Q8C006 Gm38125-201ENSMUST00000194136 3438 ntBASIC5.65□□□□□ -1.5
Trim35Q8C006 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC5.65□□□□□ -1.5
Trim35Q8C006 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 91.4 ms