Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC4.61□□□□□ -1.67
Trim56Q80VI1 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC4.61□□□□□ -1.67
Trim56Q80VI1 Gm6625-201ENSMUST00000177870 272 ntBASIC4.61□□□□□ -1.67
Trim56Q80VI1 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Trim56Q80VI1 Gm29218-205ENSMUST00000190846 615 ntBASIC4.61□□□□□ -1.67
Trim56Q80VI1 AC140344.1-201ENSMUST00000223384 387 ntBASIC4.61□□□□□ -1.67
Trim56Q80VI1 CT009713.6-201ENSMUST00000223615 294 ntBASIC4.61□□□□□ -1.67
Trim56Q80VI1 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Trim56Q80VI1 Gm10088-201ENSMUST00000074116 423 ntBASIC4.61□□□□□ -1.67
Trim56Q80VI1 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
Trim56Q80VI1 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Trim56Q80VI1 Gm38269-201ENSMUST00000194549 3298 ntBASIC4.61□□□□□ -1.67
Trim56Q80VI1 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
Trim56Q80VI1 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Trim56Q80VI1 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Trim56Q80VI1 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Trim56Q80VI1 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Trim56Q80VI1 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Trim56Q80VI1 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Trim56Q80VI1 Gm15244-201ENSMUST00000121122 130 ntBASIC4.6□□□□□ -1.67
Trim56Q80VI1 Gm11982-201ENSMUST00000121480 314 ntBASIC4.6□□□□□ -1.67
Trim56Q80VI1 Gm23960-201ENSMUST00000157206 131 ntBASIC4.6□□□□□ -1.67
Trim56Q80VI1 Gm25436-201ENSMUST00000158275 145 ntBASIC4.6□□□□□ -1.67
Trim56Q80VI1 Gm25369-201ENSMUST00000158848 132 ntBASIC4.6□□□□□ -1.67
Trim56Q80VI1 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC4.6□□□□□ -1.67
Trim56Q80VI1 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC4.6□□□□□ -1.67
Trim56Q80VI1 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC4.6□□□□□ -1.67
Trim56Q80VI1 Gm42647-201ENSMUST00000195939 459 ntBASIC4.6□□□□□ -1.67
Trim56Q80VI1 Gm9402-201ENSMUST00000196849 388 ntBASIC4.6□□□□□ -1.67
Trim56Q80VI1 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC4.6□□□□□ -1.67
Trim56Q80VI1 AC158395.1-201ENSMUST00000227206 452 ntBASIC4.6□□□□□ -1.67
Trim56Q80VI1 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Trim56Q80VI1 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
Trim56Q80VI1 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Trim56Q80VI1 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
Trim56Q80VI1 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Trim56Q80VI1 Gm37862-201ENSMUST00000193079 2533 ntBASIC4.6□□□□□ -1.67
Trim56Q80VI1 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC4.59□□□□□ -1.67
Trim56Q80VI1 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Trim56Q80VI1 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Trim56Q80VI1 Gm13457-201ENSMUST00000117885 267 ntBASIC4.59□□□□□ -1.67
Trim56Q80VI1 Gm14586-201ENSMUST00000119571 408 ntBASIC4.59□□□□□ -1.67
Trim56Q80VI1 Gm11384-201ENSMUST00000121376 303 ntBASIC4.59□□□□□ -1.67
Trim56Q80VI1 Gm24481-201ENSMUST00000157210 102 ntBASIC4.59□□□□□ -1.67
Trim56Q80VI1 Gm24745-201ENSMUST00000157840 85 ntBASIC4.59□□□□□ -1.67
Trim56Q80VI1 Gm25333-201ENSMUST00000158035 246 ntBASIC4.59□□□□□ -1.67
Trim56Q80VI1 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Trim56Q80VI1 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC4.59□□□□□ -1.67
Trim56Q80VI1 Gm23365-201ENSMUST00000175019 125 ntBASIC4.59□□□□□ -1.67
Trim56Q80VI1 Gm25960-201ENSMUST00000175110 125 ntBASIC4.59□□□□□ -1.67
Trim56Q80VI1 Gm44453-201ENSMUST00000175161 126 ntBASIC4.59□□□□□ -1.67
Trim56Q80VI1 Gm20660-201ENSMUST00000177515 289 ntBASIC4.59□□□□□ -1.67
Trim56Q80VI1 Gm25195-201ENSMUST00000177656 126 ntBASIC4.59□□□□□ -1.67
Trim56Q80VI1 Gm28921-201ENSMUST00000190219 378 ntBASIC4.59□□□□□ -1.67
Trim56Q80VI1 Gm43751-201ENSMUST00000200275 3071 ntBASIC4.59□□□□□ -1.67
Trim56Q80VI1 Gm44473-201ENSMUST00000204039 152 ntBASIC4.59□□□□□ -1.67
Trim56Q80VI1 Gm45176-201ENSMUST00000207696 4096 ntBASIC4.59□□□□□ -1.67
Trim56Q80VI1 Gm45162-201ENSMUST00000209013 618 ntBASIC4.59□□□□□ -1.67
Trim56Q80VI1 CT025577.1-201ENSMUST00000220862 2846 ntBASIC4.59□□□□□ -1.67
Trim56Q80VI1 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC4.59□□□□□ -1.67
Trim56Q80VI1 AC133598.3-201ENSMUST00000224322 568 ntBASIC4.59□□□□□ -1.67
Trim56Q80VI1 CT485608.1-201ENSMUST00000228759 389 ntBASIC4.59□□□□□ -1.67
Trim56Q80VI1 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Trim56Q80VI1 Gm22997-201ENSMUST00000082845 107 ntBASIC4.59□□□□□ -1.67
Trim56Q80VI1 Mir504-201ENSMUST00000093602 79 ntBASIC4.59□□□□□ -1.67
Trim56Q80VI1 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
Trim56Q80VI1 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
Trim56Q80VI1 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Trim56Q80VI1 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Trim56Q80VI1 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Trim56Q80VI1 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Trim56Q80VI1 Gm650-201ENSMUST00000144428 1551 ntBASIC4.58□□□□□ -1.68
Trim56Q80VI1 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Trim56Q80VI1 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
Trim56Q80VI1 Gm23578-201ENSMUST00000103943 104 ntBASIC4.58□□□□□ -1.68
Trim56Q80VI1 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Trim56Q80VI1 Gm13873-201ENSMUST00000119208 427 ntBASIC4.58□□□□□ -1.68
Trim56Q80VI1 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC4.58□□□□□ -1.68
Trim56Q80VI1 n-R5s45-201ENSMUST00000122592 110 ntBASIC4.58□□□□□ -1.68
Trim56Q80VI1 Gm24630-201ENSMUST00000122768 106 ntBASIC4.58□□□□□ -1.68
Trim56Q80VI1 Gm22531-201ENSMUST00000158819 140 ntBASIC4.58□□□□□ -1.68
Trim56Q80VI1 Gm17187-201ENSMUST00000164622 410 ntBASIC4.58□□□□□ -1.68
Trim56Q80VI1 Gm22286-201ENSMUST00000179708 107 ntBASIC4.58□□□□□ -1.68
Trim56Q80VI1 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC4.58□□□□□ -1.68
Trim56Q80VI1 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC4.58□□□□□ -1.68
Trim56Q80VI1 Gm37791-201ENSMUST00000195081 286 ntBASIC4.58□□□□□ -1.68
Trim56Q80VI1 Gm24856-201ENSMUST00000082809 107 ntBASIC4.58□□□□□ -1.68
Trim56Q80VI1 Gm25258-201ENSMUST00000083049 107 ntBASIC4.58□□□□□ -1.68
Trim56Q80VI1 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC4.58□□□□□ -1.68
Trim56Q80VI1 AC091683.1-201ENSMUST00000222307 2446 ntBASIC4.58□□□□□ -1.68
Trim56Q80VI1 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
Trim56Q80VI1 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Trim56Q80VI1 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC4.58□□□□□ -1.68
Trim56Q80VI1 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Trim56Q80VI1 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Trim56Q80VI1 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
Trim56Q80VI1 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC4.58□□□□□ -1.68
Trim56Q80VI1 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Trim56Q80VI1 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Trim56Q80VI1 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms