Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC4.28□□□□□ -1.72
Trim28Q62318 Gm5552-201ENSMUST00000197149 515 ntBASIC4.28□□□□□ -1.72
Trim28Q62318 Gm42672-201ENSMUST00000197821 352 ntBASIC4.28□□□□□ -1.72
Trim28Q62318 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC4.28□□□□□ -1.72
Trim28Q62318 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC4.28□□□□□ -1.72
Trim28Q62318 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC4.28□□□□□ -1.72
Trim28Q62318 Gm22749-201ENSMUST00000082490 107 ntBASIC4.28□□□□□ -1.72
Trim28Q62318 Gm22979-201ENSMUST00000082609 159 ntBASIC4.28□□□□□ -1.72
Trim28Q62318 Gm24856-201ENSMUST00000082809 107 ntBASIC4.28□□□□□ -1.72
Trim28Q62318 Gm25258-201ENSMUST00000083049 107 ntBASIC4.28□□□□□ -1.72
Trim28Q62318 Gm24535-201ENSMUST00000083140 107 ntBASIC4.28□□□□□ -1.72
Trim28Q62318 Gm25126-201ENSMUST00000083343 102 ntBASIC4.28□□□□□ -1.72
Trim28Q62318 Gm22352-201ENSMUST00000083917 107 ntBASIC4.28□□□□□ -1.72
Trim28Q62318 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Trim28Q62318 Gm37204-201ENSMUST00000192389 3961 ntBASIC4.28□□□□□ -1.72
Trim28Q62318 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Trim28Q62318 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Trim28Q62318 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC4.28□□□□□ -1.73
Trim28Q62318 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Trim28Q62318 AC151831.1-201ENSMUST00000227609 4033 ntBASIC4.27□□□□□ -1.73
Trim28Q62318 Gm42547-201ENSMUST00000201159 3798 ntBASIC4.27□□□□□ -1.73
Trim28Q62318 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Trim28Q62318 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC4.27□□□□□ -1.73
Trim28Q62318 Gm14101-201ENSMUST00000121502 473 ntBASIC4.27□□□□□ -1.73
Trim28Q62318 Gm22322-201ENSMUST00000157151 111 ntBASIC4.27□□□□□ -1.73
Trim28Q62318 Gm26045-201ENSMUST00000157862 97 ntBASIC4.27□□□□□ -1.73
Trim28Q62318 Gm25454-201ENSMUST00000157947 315 ntBASIC4.27□□□□□ -1.73
Trim28Q62318 Gm24739-201ENSMUST00000158855 292 ntBASIC4.27□□□□□ -1.73
Trim28Q62318 Gm17148-201ENSMUST00000164702 249 ntBASIC4.27□□□□□ -1.73
Trim28Q62318 Gm43829-201ENSMUST00000196191 3802 ntBASIC4.27□□□□□ -1.73
Trim28Q62318 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC4.27□□□□□ -1.73
Trim28Q62318 Gm42828-201ENSMUST00000199669 469 ntBASIC4.27□□□□□ -1.73
Trim28Q62318 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Trim28Q62318 Gm45146-201ENSMUST00000207108 221 ntBASIC4.27□□□□□ -1.73
Trim28Q62318 Gm44938-201ENSMUST00000208614 427 ntBASIC4.27□□□□□ -1.73
Trim28Q62318 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Trim28Q62318 AC099578.1-201ENSMUST00000220147 435 ntBASIC4.27□□□□□ -1.73
Trim28Q62318 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC4.27□□□□□ -1.73
Trim28Q62318 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC4.27□□□□□ -1.73
Trim28Q62318 AC159621.1-201ENSMUST00000223249 163 ntBASIC4.27□□□□□ -1.73
Trim28Q62318 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Trim28Q62318 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Trim28Q62318 Gm5347-201ENSMUST00000210542 2327 ntBASIC4.27□□□□□ -1.73
Trim28Q62318 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
Trim28Q62318 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trim28Q62318 n-R5s219-201ENSMUST00000104328 132 ntBASIC4.26□□□□□ -1.73
Trim28Q62318 Mir875-201ENSMUST00000104698 78 ntBASIC4.26□□□□□ -1.73
Trim28Q62318 Gm13868-201ENSMUST00000122411 294 ntBASIC4.26□□□□□ -1.73
Trim28Q62318 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trim28Q62318 Gm22843-201ENSMUST00000157710 134 ntBASIC4.26□□□□□ -1.73
Trim28Q62318 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Trim28Q62318 Mir3066-201ENSMUST00000175296 83 ntBASIC4.26□□□□□ -1.73
Trim28Q62318 Snora15-201ENSMUST00000177461 131 ntBASIC4.26□□□□□ -1.73
Trim28Q62318 Gm22448-201ENSMUST00000179254 107 ntBASIC4.26□□□□□ -1.73
Trim28Q62318 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC4.26□□□□□ -1.73
Trim28Q62318 Gm44594-201ENSMUST00000208982 407 ntBASIC4.26□□□□□ -1.73
Trim28Q62318 Gm18488-201ENSMUST00000215082 364 ntBASIC4.26□□□□□ -1.73
Trim28Q62318 CT030247.1-201ENSMUST00000216810 267 ntBASIC4.26□□□□□ -1.73
Trim28Q62318 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Trim28Q62318 Gm23460-201ENSMUST00000083258 109 ntBASIC4.26□□□□□ -1.73
Trim28Q62318 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Trim28Q62318 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Trim28Q62318 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Trim28Q62318 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
Trim28Q62318 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC4.25□□□□□ -1.73
Trim28Q62318 Nufip2-201ENSMUST00000100802 5158 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Trim28Q62318 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Trim28Q62318 AC132237.1-201ENSMUST00000220950 4475 ntBASIC4.25□□□□□ -1.73
Trim28Q62318 Mir592-201ENSMUST00000102113 96 ntBASIC4.25□□□□□ -1.73
Trim28Q62318 Gm23744-201ENSMUST00000104231 149 ntBASIC4.25□□□□□ -1.73
Trim28Q62318 Gm14355-201ENSMUST00000117352 264 ntBASIC4.25□□□□□ -1.73
Trim28Q62318 Gm12982-201ENSMUST00000117408 190 ntBASIC4.25□□□□□ -1.73
Trim28Q62318 Gm13378-201ENSMUST00000117483 336 ntBASIC4.25□□□□□ -1.73
Trim28Q62318 Gm13122-201ENSMUST00000118380 453 ntBASIC4.25□□□□□ -1.73
Trim28Q62318 Gm14652-201ENSMUST00000118479 235 ntBASIC4.25□□□□□ -1.73
Trim28Q62318 Gm12815-201ENSMUST00000121737 135 ntBASIC4.25□□□□□ -1.73
Trim28Q62318 Gm14333-201ENSMUST00000130484 264 ntBASIC4.25□□□□□ -1.73
Trim28Q62318 Gm14389-201ENSMUST00000140453 241 ntBASIC4.25□□□□□ -1.73
Trim28Q62318 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC4.25□□□□□ -1.73
Trim28Q62318 Gm23660-201ENSMUST00000178362 79 ntBASIC4.25□□□□□ -1.73
Trim28Q62318 Gm24088-201ENSMUST00000179100 79 ntBASIC4.25□□□□□ -1.73
Trim28Q62318 Gm27233-201ENSMUST00000184030 307 ntBASIC4.25□□□□□ -1.73
Trim28Q62318 Gm44343-201ENSMUST00000196702 90 ntBASIC4.25□□□□□ -1.73
Trim28Q62318 Gm25203-202ENSMUST00000200458 216 ntBASIC4.25□□□□□ -1.73
Trim28Q62318 Trav15n-3-201ENSMUST00000200498 168 ntBASIC4.25□□□□□ -1.73
Trim28Q62318 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC4.25□□□□□ -1.73
Trim28Q62318 AC123618.1-201ENSMUST00000220174 360 ntBASIC4.25□□□□□ -1.73
Trim28Q62318 Gm46997-201ENSMUST00000222108 217 ntBASIC4.25□□□□□ -1.73
Trim28Q62318 Gm26447-201ENSMUST00000082448 129 ntBASIC4.25□□□□□ -1.73
Trim28Q62318 Gm25203-201ENSMUST00000082842 215 ntBASIC4.25□□□□□ -1.73
Trim28Q62318 Gm25937-201ENSMUST00000083912 107 ntBASIC4.25□□□□□ -1.73
Trim28Q62318 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Trim28Q62318 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Trim28Q62318 Gm45264-201ENSMUST00000210090 3995 ntBASIC4.24□□□□□ -1.73
Trim28Q62318 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Trim28Q62318 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Trim28Q62318 Gm25308-201ENSMUST00000104171 158 ntBASIC4.24□□□□□ -1.73
Trim28Q62318 Gm12255-201ENSMUST00000117184 284 ntBASIC4.24□□□□□ -1.73
Trim28Q62318 Gm12871-201ENSMUST00000118758 438 ntBASIC4.24□□□□□ -1.73
Trim28Q62318 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC4.24□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 142.5 ms