Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC2.47□□□□□ -2.01
Sox3P53784 Gm25156-201ENSMUST00000179809 79 ntBASIC2.47□□□□□ -2.01
Sox3P53784 Mir6353-201ENSMUST00000183596 113 ntBASIC2.47□□□□□ -2.01
Sox3P53784 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC2.47□□□□□ -2.01
Sox3P53784 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC2.47□□□□□ -2.01
Sox3P53784 Gm6012-201ENSMUST00000210821 730 ntBASIC2.47□□□□□ -2.01
Sox3P53784 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
Sox3P53784 AC166358.6-201ENSMUST00000221834 1206 ntBASIC2.47□□□□□ -2.01
Sox3P53784 AC165146.1-201ENSMUST00000223777 900 ntBASIC2.47□□□□□ -2.01
Sox3P53784 AC124524.1-201ENSMUST00000225833 181 ntBASIC2.47□□□□□ -2.01
Sox3P53784 Gm22061-201ENSMUST00000082557 107 ntBASIC2.47□□□□□ -2.01
Sox3P53784 Gm26206-201ENSMUST00000082908 110 ntBASIC2.47□□□□□ -2.01
Sox3P53784 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Sox3P53784 Gm45039-201ENSMUST00000209181 3477 ntBASIC2.47□□□□□ -2.01
Sox3P53784 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.46□□□□□ -2.02
Sox3P53784 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
Sox3P53784 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC2.46□□□□□ -2.02
Sox3P53784 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.46□□□□□ -2.02
Sox3P53784 AC154511.1-201ENSMUST00000222578 1587 ntBASIC2.46□□□□□ -2.02
Sox3P53784 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
Sox3P53784 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Sox3P53784 Gm26015-201ENSMUST00000104402 125 ntBASIC2.46□□□□□ -2.02
Sox3P53784 Gm13085-201ENSMUST00000118356 171 ntBASIC2.46□□□□□ -2.02
Sox3P53784 Gm11356-201ENSMUST00000118974 192 ntBASIC2.46□□□□□ -2.02
Sox3P53784 Gm11352-201ENSMUST00000119264 517 ntBASIC2.46□□□□□ -2.02
Sox3P53784 Gm5937-201ENSMUST00000119715 643 ntBASIC2.46□□□□□ -2.02
Sox3P53784 Gm13210-201ENSMUST00000121483 273 ntBASIC2.46□□□□□ -2.02
Sox3P53784 Gm13356-201ENSMUST00000121678 335 ntBASIC2.46□□□□□ -2.02
Sox3P53784 Gm15065-201ENSMUST00000121699 273 ntBASIC2.46□□□□□ -2.02
Sox3P53784 Gm26424-201ENSMUST00000122530 104 ntBASIC2.46□□□□□ -2.02
Sox3P53784 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
Sox3P53784 Gm17377-201ENSMUST00000165184 207 ntBASIC2.46□□□□□ -2.02
Sox3P53784 Gm22853-201ENSMUST00000174974 131 ntBASIC2.46□□□□□ -2.02
Sox3P53784 Gm22264-201ENSMUST00000178200 107 ntBASIC2.46□□□□□ -2.02
Sox3P53784 Gm23269-201ENSMUST00000178701 107 ntBASIC2.46□□□□□ -2.02
Sox3P53784 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC2.46□□□□□ -2.02
Sox3P53784 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC2.46□□□□□ -2.02
Sox3P53784 Gm29335-201ENSMUST00000188361 459 ntBASIC2.46□□□□□ -2.02
Sox3P53784 Gm28745-201ENSMUST00000190069 305 ntBASIC2.46□□□□□ -2.02
Sox3P53784 Gm36984-201ENSMUST00000192770 235 ntBASIC2.46□□□□□ -2.02
Sox3P53784 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC2.46□□□□□ -2.02
Sox3P53784 Gm43264-201ENSMUST00000202284 325 ntBASIC2.46□□□□□ -2.02
Sox3P53784 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
Sox3P53784 Gm44060-201ENSMUST00000204440 410 ntBASIC2.46□□□□□ -2.02
Sox3P53784 AC168062.3-201ENSMUST00000227025 165 ntBASIC2.46□□□□□ -2.02
Sox3P53784 Gm24490-201ENSMUST00000083803 98 ntBASIC2.46□□□□□ -2.02
Sox3P53784 AC124561.2-201ENSMUST00000226657 1973 ntBASIC2.46□□□□□ -2.02
Sox3P53784 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Sox3P53784 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
Sox3P53784 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Sox3P53784 Gm26384-201ENSMUST00000102183 110 ntBASIC2.45□□□□□ -2.02
Sox3P53784 Gm23060-201ENSMUST00000102345 109 ntBASIC2.45□□□□□ -2.02
Sox3P53784 Gm12878-201ENSMUST00000118744 332 ntBASIC2.45□□□□□ -2.02
Sox3P53784 Gm25784-201ENSMUST00000122524 81 ntBASIC2.45□□□□□ -2.02
Sox3P53784 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC2.45□□□□□ -2.02
Sox3P53784 Gm22560-201ENSMUST00000157332 120 ntBASIC2.45□□□□□ -2.02
Sox3P53784 Gm24436-201ENSMUST00000157889 302 ntBASIC2.45□□□□□ -2.02
Sox3P53784 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
Sox3P53784 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Sox3P53784 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC2.45□□□□□ -2.02
Sox3P53784 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Sox3P53784 Gm27869-201ENSMUST00000184327 122 ntBASIC2.45□□□□□ -2.02
Sox3P53784 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Sox3P53784 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC2.45□□□□□ -2.02
Sox3P53784 Gm28163-201ENSMUST00000187099 325 ntBASIC2.45□□□□□ -2.02
Sox3P53784 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC2.45□□□□□ -2.02
Sox3P53784 Gm37377-201ENSMUST00000191733 304 ntBASIC2.45□□□□□ -2.02
Sox3P53784 Gm19066-201ENSMUST00000193232 1078 ntBASIC2.45□□□□□ -2.02
Sox3P53784 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC2.45□□□□□ -2.02
Sox3P53784 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.45□□□□□ -2.02
Sox3P53784 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC2.45□□□□□ -2.02
Sox3P53784 AC112935.1-201ENSMUST00000227603 250 ntBASIC2.45□□□□□ -2.02
Sox3P53784 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
Sox3P53784 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Sox3P53784 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Sox3P53784 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Sox3P53784 Gm25414-201ENSMUST00000101814 107 ntBASIC2.44□□□□□ -2.02
Sox3P53784 Gm23744-201ENSMUST00000104231 149 ntBASIC2.44□□□□□ -2.02
Sox3P53784 Gm12155-201ENSMUST00000121267 160 ntBASIC2.44□□□□□ -2.02
Sox3P53784 n-R5s216-201ENSMUST00000122755 112 ntBASIC2.44□□□□□ -2.02
Sox3P53784 Gm23599-201ENSMUST00000157261 251 ntBASIC2.44□□□□□ -2.02
Sox3P53784 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Sox3P53784 Gm5277-201ENSMUST00000164923 556 ntBASIC2.44□□□□□ -2.02
Sox3P53784 Snord116l12-201ENSMUST00000179816 94 ntBASIC2.44□□□□□ -2.02
Sox3P53784 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Sox3P53784 Mir7026-201ENSMUST00000184384 67 ntBASIC2.44□□□□□ -2.02
Sox3P53784 Gm42857-201ENSMUST00000200823 339 ntBASIC2.44□□□□□ -2.02
Sox3P53784 Gm44282-201ENSMUST00000203199 190 ntBASIC2.44□□□□□ -2.02
Sox3P53784 Gm44990-201ENSMUST00000203922 217 ntBASIC2.44□□□□□ -2.02
Sox3P53784 Gm44135-201ENSMUST00000205221 368 ntBASIC2.44□□□□□ -2.02
Sox3P53784 Gm45101-201ENSMUST00000208327 232 ntBASIC2.44□□□□□ -2.02
Sox3P53784 Gm45687-201ENSMUST00000209454 155 ntBASIC2.44□□□□□ -2.02
Sox3P53784 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC2.44□□□□□ -2.02
Sox3P53784 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Sox3P53784 AC132918.1-201ENSMUST00000227877 925 ntBASIC2.44□□□□□ -2.02
Sox3P53784 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Sox3P53784 Tas2r107-201ENSMUST00000065781 1032 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Sox3P53784 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Sox3P53784 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Sox3P53784 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms