Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm28481-201ENSMUST00000189231 315 ntBASIC1.84□□□□□ -2.12
Col5a1O88207 Gm29059-201ENSMUST00000191534 315 ntBASIC1.84□□□□□ -2.12
Col5a1O88207 Gm37765-201ENSMUST00000192395 315 ntBASIC1.84□□□□□ -2.12
Col5a1O88207 Gm37337-201ENSMUST00000192601 993 ntBASIC1.84□□□□□ -2.12
Col5a1O88207 Gm37237-201ENSMUST00000192893 315 ntBASIC1.84□□□□□ -2.12
Col5a1O88207 Gm36968-201ENSMUST00000193737 315 ntBASIC1.84□□□□□ -2.12
Col5a1O88207 Gm37641-201ENSMUST00000193837 239 ntBASIC1.84□□□□□ -2.12
Col5a1O88207 Gm38290-201ENSMUST00000195238 315 ntBASIC1.84□□□□□ -2.12
Col5a1O88207 Gm43489-201ENSMUST00000196810 993 ntBASIC1.84□□□□□ -2.12
Col5a1O88207 Gm5322-201ENSMUST00000206142 699 ntBASIC1.84□□□□□ -2.12
Col5a1O88207 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC1.84□□□□□ -2.12
Col5a1O88207 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
Col5a1O88207 AC156952.1-201ENSMUST00000220361 793 ntBASIC1.84□□□□□ -2.12
Col5a1O88207 AC117814.1-201ENSMUST00000226135 352 ntBASIC1.84□□□□□ -2.12
Col5a1O88207 AC121960.3-201ENSMUST00000227077 623 ntBASIC1.84□□□□□ -2.12
Col5a1O88207 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC1.84□□□□□ -2.12
Col5a1O88207 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Col5a1O88207 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Col5a1O88207 Gm15095-201ENSMUST00000118996 1430 ntBASIC1.83□□□□□ -2.12
Col5a1O88207 Gm22486-201ENSMUST00000116815 137 ntBASIC1.83□□□□□ -2.12
Col5a1O88207 Gm12513-201ENSMUST00000118617 352 ntBASIC1.83□□□□□ -2.12
Col5a1O88207 Gm2318-201ENSMUST00000119623 639 ntBASIC1.83□□□□□ -2.12
Col5a1O88207 Gm2768-201ENSMUST00000121062 250 ntBASIC1.83□□□□□ -2.12
Col5a1O88207 Gm13210-201ENSMUST00000121483 273 ntBASIC1.83□□□□□ -2.12
Col5a1O88207 Gm15065-201ENSMUST00000121699 273 ntBASIC1.83□□□□□ -2.12
Col5a1O88207 Gm12045-201ENSMUST00000122122 573 ntBASIC1.83□□□□□ -2.12
Col5a1O88207 Gm26173-201ENSMUST00000158416 136 ntBASIC1.83□□□□□ -2.12
Col5a1O88207 Gm23505-201ENSMUST00000158989 130 ntBASIC1.83□□□□□ -2.12
Col5a1O88207 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC1.83□□□□□ -2.12
Col5a1O88207 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC1.83□□□□□ -2.12
Col5a1O88207 Gm17085-201ENSMUST00000165425 502 ntBASIC1.83□□□□□ -2.12
Col5a1O88207 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
Col5a1O88207 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC1.83□□□□□ -2.12
Col5a1O88207 Gm7438-201ENSMUST00000177664 639 ntBASIC1.83□□□□□ -2.12
Col5a1O88207 Gm7408-201ENSMUST00000178014 639 ntBASIC1.83□□□□□ -2.12
Col5a1O88207 Gm7386-201ENSMUST00000178020 639 ntBASIC1.83□□□□□ -2.12
Col5a1O88207 Gm3657-201ENSMUST00000178170 639 ntBASIC1.83□□□□□ -2.12
Col5a1O88207 Gm7415-201ENSMUST00000178205 639 ntBASIC1.83□□□□□ -2.12
Col5a1O88207 Gm7398-201ENSMUST00000178589 639 ntBASIC1.83□□□□□ -2.12
Col5a1O88207 Gm7391-201ENSMUST00000178680 639 ntBASIC1.83□□□□□ -2.12
Col5a1O88207 Gm7375-201ENSMUST00000179232 639 ntBASIC1.83□□□□□ -2.12
Col5a1O88207 Gm3681-201ENSMUST00000179940 639 ntBASIC1.83□□□□□ -2.12
Col5a1O88207 Gm26652-202ENSMUST00000181672 475 ntBASIC1.83□□□□□ -2.12
Col5a1O88207 Gm9022-202ENSMUST00000183285 483 ntBASIC1.83□□□□□ -2.12
Col5a1O88207 Gm43810-201ENSMUST00000201018 232 ntBASIC1.83□□□□□ -2.12
Col5a1O88207 Gm18410-201ENSMUST00000207199 577 ntBASIC1.83□□□□□ -2.12
Col5a1O88207 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC1.83□□□□□ -2.12
Col5a1O88207 Gm45445-201ENSMUST00000209586 232 ntBASIC1.83□□□□□ -2.12
Col5a1O88207 Gm29884-201ENSMUST00000218403 453 ntBASIC1.83□□□□□ -2.12
Col5a1O88207 AL662807.1-201ENSMUST00000224183 126 ntBASIC1.83□□□□□ -2.12
Col5a1O88207 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC1.83□□□□□ -2.12
Col5a1O88207 Gm6462-201ENSMUST00000081488 304 ntBASIC1.83□□□□□ -2.12
Col5a1O88207 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Col5a1O88207 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Col5a1O88207 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Col5a1O88207 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Col5a1O88207 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Col5a1O88207 Gm25496-201ENSMUST00000104430 120 ntBASIC1.82□□□□□ -2.12
Col5a1O88207 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC1.82□□□□□ -2.12
Col5a1O88207 Gm14602-201ENSMUST00000118625 340 ntBASIC1.82□□□□□ -2.12
Col5a1O88207 Gm15077-201ENSMUST00000122344 362 ntBASIC1.82□□□□□ -2.12
Col5a1O88207 Gm23212-201ENSMUST00000122718 60 ntBASIC1.82□□□□□ -2.12
Col5a1O88207 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC1.82□□□□□ -2.12
Col5a1O88207 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC1.82□□□□□ -2.12
Col5a1O88207 Gm23032-201ENSMUST00000157995 107 ntBASIC1.82□□□□□ -2.12
Col5a1O88207 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
Col5a1O88207 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Col5a1O88207 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
Col5a1O88207 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Col5a1O88207 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Col5a1O88207 Gm27919-201ENSMUST00000185163 107 ntBASIC1.82□□□□□ -2.12
Col5a1O88207 Gm28872-201ENSMUST00000191518 158 ntBASIC1.82□□□□□ -2.12
Col5a1O88207 Gm37455-201ENSMUST00000191993 529 ntBASIC1.82□□□□□ -2.12
Col5a1O88207 Gm31123-201ENSMUST00000192094 666 ntBASIC1.82□□□□□ -2.12
Col5a1O88207 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC1.82□□□□□ -2.12
Col5a1O88207 Gm36954-201ENSMUST00000195362 363 ntBASIC1.82□□□□□ -2.12
Col5a1O88207 AC170810.3-201ENSMUST00000226177 374 ntBASIC1.82□□□□□ -2.12
Col5a1O88207 AC166344.2-201ENSMUST00000226747 374 ntBASIC1.82□□□□□ -2.12
Col5a1O88207 Gm7984-201ENSMUST00000060640 538 ntBASIC1.82□□□□□ -2.12
Col5a1O88207 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Col5a1O88207 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Col5a1O88207 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC1.82□□□□□ -2.12
Col5a1O88207 Gm23516-201ENSMUST00000093728 107 ntBASIC1.82□□□□□ -2.12
Col5a1O88207 Gm22591-201ENSMUST00000104243 106 ntBASIC1.82□□□□□ -2.12
Col5a1O88207 Mir190b-201ENSMUST00000104803 80 ntBASIC1.82□□□□□ -2.12
Col5a1O88207 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Col5a1O88207 Gm14945-201ENSMUST00000119556 1118 ntBASIC1.82□□□□□ -2.12
Col5a1O88207 Gm15452-201ENSMUST00000119877 240 ntBASIC1.82□□□□□ -2.12
Col5a1O88207 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC1.82□□□□□ -2.12
Col5a1O88207 Ear-ps12-201ENSMUST00000161720 451 ntBASIC1.82□□□□□ -2.12
Col5a1O88207 Gm3851-201ENSMUST00000168653 318 ntBASIC1.82□□□□□ -2.12
Col5a1O88207 Gm27894-201ENSMUST00000184177 92 ntBASIC1.82□□□□□ -2.12
Col5a1O88207 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC1.82□□□□□ -2.12
Col5a1O88207 Gm29641-201ENSMUST00000188955 259 ntBASIC1.82□□□□□ -2.12
Col5a1O88207 Gm18775-201ENSMUST00000190763 586 ntBASIC1.82□□□□□ -2.12
Col5a1O88207 Gm17771-201ENSMUST00000194477 1147 ntBASIC1.82□□□□□ -2.12
Col5a1O88207 Gm44348-201ENSMUST00000200165 122 ntBASIC1.82□□□□□ -2.12
Col5a1O88207 Gm44533-201ENSMUST00000207782 268 ntBASIC1.82□□□□□ -2.12
Col5a1O88207 CT009696.2-201ENSMUST00000216668 432 ntBASIC1.82□□□□□ -2.12
Col5a1O88207 AC159380.1-201ENSMUST00000218096 121 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms