Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Clcn6O35454 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Clcn6O35454 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Clcn6O35454 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Clcn6O35454 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Clcn6O35454 Gm14946-201ENSMUST00000119859 296 ntBASIC5.82□□□□□ -1.48
Clcn6O35454 Gm11966-201ENSMUST00000119907 87 ntBASIC5.82□□□□□ -1.48
Clcn6O35454 Mir1951-201ENSMUST00000157981 89 ntBASIC5.82□□□□□ -1.48
Clcn6O35454 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC5.82□□□□□ -1.48
Clcn6O35454 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC5.82□□□□□ -1.48
Clcn6O35454 Gm26121-201ENSMUST00000083364 162 ntBASIC5.82□□□□□ -1.48
Clcn6O35454 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Clcn6O35454 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC5.82□□□□□ -1.48
Clcn6O35454 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
Clcn6O35454 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Clcn6O35454 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC5.82□□□□□ -1.48
Clcn6O35454 Gm45854-201ENSMUST00000211857 3488 ntBASIC5.82□□□□□ -1.48
Clcn6O35454 Gm43706-201ENSMUST00000198767 2652 ntBASIC5.81□□□□□ -1.48
Clcn6O35454 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Clcn6O35454 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Clcn6O35454 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
Clcn6O35454 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Clcn6O35454 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
Clcn6O35454 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC5.81□□□□□ -1.48
Clcn6O35454 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Clcn6O35454 Far2-202ENSMUST00000111607 3395 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Clcn6O35454 Gm22451-201ENSMUST00000122803 151 ntBASIC5.81□□□□□ -1.48
Clcn6O35454 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Clcn6O35454 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Clcn6O35454 Gm24719-201ENSMUST00000157520 110 ntBASIC5.81□□□□□ -1.48
Clcn6O35454 Gm23225-201ENSMUST00000158121 114 ntBASIC5.81□□□□□ -1.48
Clcn6O35454 Gm23384-201ENSMUST00000158593 103 ntBASIC5.81□□□□□ -1.48
Clcn6O35454 Mir6377-201ENSMUST00000183760 114 ntBASIC5.81□□□□□ -1.48
Clcn6O35454 Gm44326-201ENSMUST00000198226 101 ntBASIC5.81□□□□□ -1.48
Clcn6O35454 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC5.81□□□□□ -1.48
Clcn6O35454 AC154616.2-201ENSMUST00000227978 398 ntBASIC5.81□□□□□ -1.48
Clcn6O35454 Gm22972-201ENSMUST00000083297 131 ntBASIC5.81□□□□□ -1.48
Clcn6O35454 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
Clcn6O35454 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Clcn6O35454 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Clcn6O35454 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Clcn6O35454 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Clcn6O35454 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Clcn6O35454 Gm37400-201ENSMUST00000193148 3605 ntBASIC5.8□□□□□ -1.48
Clcn6O35454 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Clcn6O35454 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Clcn6O35454 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Clcn6O35454 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Clcn6O35454 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC5.8□□□□□ -1.48
Clcn6O35454 Gm22370-201ENSMUST00000102422 83 ntBASIC5.8□□□□□ -1.48
Clcn6O35454 Gm12488-201ENSMUST00000122449 499 ntBASIC5.8□□□□□ -1.48
Clcn6O35454 Gm22867-201ENSMUST00000157499 109 ntBASIC5.8□□□□□ -1.48
Clcn6O35454 Gm24716-201ENSMUST00000157524 104 ntBASIC5.8□□□□□ -1.48
Clcn6O35454 Gm22932-201ENSMUST00000175510 72 ntBASIC5.8□□□□□ -1.48
Clcn6O35454 Snora26-201ENSMUST00000175614 121 ntBASIC5.8□□□□□ -1.48
Clcn6O35454 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC5.8□□□□□ -1.48
Clcn6O35454 Gm44519-201ENSMUST00000206486 122 ntBASIC5.8□□□□□ -1.48
Clcn6O35454 Gm45687-201ENSMUST00000209454 155 ntBASIC5.8□□□□□ -1.48
Clcn6O35454 Gm46223-201ENSMUST00000215196 675 ntBASIC5.8□□□□□ -1.48
Clcn6O35454 Gm4510-201ENSMUST00000218265 427 ntBASIC5.8□□□□□ -1.48
Clcn6O35454 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC5.8□□□□□ -1.48
Clcn6O35454 AC122834.1-201ENSMUST00000227182 425 ntBASIC5.8□□□□□ -1.48
Clcn6O35454 AC166369.3-201ENSMUST00000227286 409 ntBASIC5.8□□□□□ -1.48
Clcn6O35454 Gm24524-201ENSMUST00000082925 170 ntBASIC5.8□□□□□ -1.48
Clcn6O35454 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
Clcn6O35454 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Clcn6O35454 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Clcn6O35454 Gm6645-201ENSMUST00000118505 2726 ntBASIC5.8□□□□□ -1.48
Clcn6O35454 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Clcn6O35454 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
Clcn6O35454 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
Clcn6O35454 Gm44751-201ENSMUST00000208302 4387 ntBASIC5.79□□□□□ -1.48
Clcn6O35454 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC5.79□□□□□ -1.48
Clcn6O35454 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
Clcn6O35454 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Clcn6O35454 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Clcn6O35454 Gm45853-201ENSMUST00000212310 3171 ntBASIC5.79□□□□□ -1.48
Clcn6O35454 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Clcn6O35454 Gm15365-201ENSMUST00000122392 300 ntBASIC5.79□□□□□ -1.48
Clcn6O35454 Gm22210-201ENSMUST00000158101 144 ntBASIC5.79□□□□□ -1.48
Clcn6O35454 Gm23115-201ENSMUST00000158480 108 ntBASIC5.79□□□□□ -1.48
Clcn6O35454 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC5.79□□□□□ -1.48
Clcn6O35454 Gm44319-201ENSMUST00000196974 93 ntBASIC5.79□□□□□ -1.48
Clcn6O35454 n-TStga1-201ENSMUST00000199903 109 ntBASIC5.79□□□□□ -1.48
Clcn6O35454 Gm42961-201ENSMUST00000202023 181 ntBASIC5.79□□□□□ -1.48
Clcn6O35454 Gm3702-201ENSMUST00000211754 346 ntBASIC5.79□□□□□ -1.48
Clcn6O35454 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Clcn6O35454 AC124709.3-201ENSMUST00000227294 171 ntBASIC5.79□□□□□ -1.48
Clcn6O35454 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC5.79□□□□□ -1.48
Clcn6O35454 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Clcn6O35454 Zfhx4-201ENSMUST00000026284 13874 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
Clcn6O35454 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Clcn6O35454 Gm37236-201ENSMUST00000193670 3249 ntBASIC5.79□□□□□ -1.48
Clcn6O35454 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Clcn6O35454 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Clcn6O35454 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC5.79□□□□□ -1.48
Clcn6O35454 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Clcn6O35454 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
Clcn6O35454 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Clcn6O35454 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC5.78□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 93.1 ms