Protein–RNA interactions for Protein: A3KGF9

Ccdc9b, Coiled-coil domain-containing protein 9B, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9bA3KGF9 Gm27952-201ENSMUST00000184748 105 ntBASIC4.15□□□□□ -1.75
Ccdc9bA3KGF9 Mir6540-201ENSMUST00000184886 108 ntBASIC4.15□□□□□ -1.75
Ccdc9bA3KGF9 Gm37636-201ENSMUST00000193583 359 ntBASIC4.15□□□□□ -1.75
Ccdc9bA3KGF9 Gm35702-201ENSMUST00000198653 511 ntBASIC4.15□□□□□ -1.75
Ccdc9bA3KGF9 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC4.15□□□□□ -1.75
Ccdc9bA3KGF9 AC152062.1-201ENSMUST00000218129 386 ntBASIC4.15□□□□□ -1.75
Ccdc9bA3KGF9 AC154548.1-201ENSMUST00000225844 3838 ntBASIC4.15□□□□□ -1.75
Ccdc9bA3KGF9 AC124581.4-201ENSMUST00000225874 463 ntBASIC4.15□□□□□ -1.75
Ccdc9bA3KGF9 AC126253.2-201ENSMUST00000226518 205 ntBASIC4.15□□□□□ -1.75
Ccdc9bA3KGF9 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
Ccdc9bA3KGF9 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC4.15□□□□□ -1.75
Ccdc9bA3KGF9 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Ccdc9bA3KGF9 Gm37733-201ENSMUST00000195478 2962 ntBASIC4.15□□□□□ -1.75
Ccdc9bA3KGF9 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Ccdc9bA3KGF9 Synpr-207ENSMUST00000223583 3362 ntBASIC4.15□□□□□ -1.75
Ccdc9bA3KGF9 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Ccdc9bA3KGF9 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Ccdc9bA3KGF9 Gm15902-202ENSMUST00000219623 3477 ntBASIC4.15□□□□□ -1.75
Ccdc9bA3KGF9 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Ccdc9bA3KGF9 Gm15319-201ENSMUST00000084046 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Ccdc9bA3KGF9 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Ccdc9bA3KGF9 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Ccdc9bA3KGF9 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Ccdc9bA3KGF9 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
Ccdc9bA3KGF9 Gm43844-201ENSMUST00000202926 5605 ntBASIC4.14□□□□□ -1.75
Ccdc9bA3KGF9 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
Ccdc9bA3KGF9 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Ccdc9bA3KGF9 Gm38240-201ENSMUST00000195110 2487 ntBASIC4.14□□□□□ -1.75
Ccdc9bA3KGF9 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC4.14□□□□□ -1.75
Ccdc9bA3KGF9 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Ccdc9bA3KGF9 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Ccdc9bA3KGF9 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Ccdc9bA3KGF9 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Ccdc9bA3KGF9 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Ccdc9bA3KGF9 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Ccdc9bA3KGF9 Gm12982-201ENSMUST00000117408 190 ntBASIC4.14□□□□□ -1.75
Ccdc9bA3KGF9 Gm12722-201ENSMUST00000118507 493 ntBASIC4.14□□□□□ -1.75
Ccdc9bA3KGF9 Gm16032-201ENSMUST00000118534 168 ntBASIC4.14□□□□□ -1.75
Ccdc9bA3KGF9 Gm23789-201ENSMUST00000122536 301 ntBASIC4.14□□□□□ -1.75
Ccdc9bA3KGF9 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC4.14□□□□□ -1.75
Ccdc9bA3KGF9 Gm23641-201ENSMUST00000157857 101 ntBASIC4.14□□□□□ -1.75
Ccdc9bA3KGF9 Gm23640-201ENSMUST00000157860 104 ntBASIC4.14□□□□□ -1.75
Ccdc9bA3KGF9 Gm26001-201ENSMUST00000157989 103 ntBASIC4.14□□□□□ -1.75
Ccdc9bA3KGF9 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC4.14□□□□□ -1.75
Ccdc9bA3KGF9 Gm25748-201ENSMUST00000175487 70 ntBASIC4.14□□□□□ -1.75
Ccdc9bA3KGF9 Gm22450-201ENSMUST00000179641 107 ntBASIC4.14□□□□□ -1.75
Ccdc9bA3KGF9 Gm25473-201ENSMUST00000180191 107 ntBASIC4.14□□□□□ -1.75
Ccdc9bA3KGF9 Mir7658-201ENSMUST00000184043 57 ntBASIC4.14□□□□□ -1.75
Ccdc9bA3KGF9 Gm37431-201ENSMUST00000195102 111 ntBASIC4.14□□□□□ -1.75
Ccdc9bA3KGF9 Igkv13-76-201ENSMUST00000197621 347 ntBASIC4.14□□□□□ -1.75
Ccdc9bA3KGF9 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC4.14□□□□□ -1.75
Ccdc9bA3KGF9 AC160550.3-201ENSMUST00000226818 400 ntBASIC4.14□□□□□ -1.75
Ccdc9bA3KGF9 AC115735.2-201ENSMUST00000227135 351 ntBASIC4.14□□□□□ -1.75
Ccdc9bA3KGF9 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Ccdc9bA3KGF9 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Ccdc9bA3KGF9 n-R5s167-201ENSMUST00000083227 121 ntBASIC4.14□□□□□ -1.75
Ccdc9bA3KGF9 Gm26071-201ENSMUST00000083261 107 ntBASIC4.14□□□□□ -1.75
Ccdc9bA3KGF9 Gm25651-201ENSMUST00000083782 119 ntBASIC4.14□□□□□ -1.75
Ccdc9bA3KGF9 Gm24521-201ENSMUST00000083958 107 ntBASIC4.14□□□□□ -1.75
Ccdc9bA3KGF9 AC155805.1-201ENSMUST00000222419 3808 ntBASIC4.14□□□□□ -1.75
Ccdc9bA3KGF9 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Ccdc9bA3KGF9 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Ccdc9bA3KGF9 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Ccdc9bA3KGF9 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Ccdc9bA3KGF9 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC4.13□□□□□ -1.75
Ccdc9bA3KGF9 Gm28362-201ENSMUST00000189430 2420 ntBASIC4.13□□□□□ -1.75
Ccdc9bA3KGF9 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Ccdc9bA3KGF9 Gm23594-201ENSMUST00000104307 134 ntBASIC4.13□□□□□ -1.75
Ccdc9bA3KGF9 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC4.13□□□□□ -1.75
Ccdc9bA3KGF9 Gm11065-201ENSMUST00000111462 228 ntBASIC4.13□□□□□ -1.75
Ccdc9bA3KGF9 Gm8840-201ENSMUST00000122454 386 ntBASIC4.13□□□□□ -1.75
Ccdc9bA3KGF9 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC4.13□□□□□ -1.75
Ccdc9bA3KGF9 Gm23960-201ENSMUST00000157206 131 ntBASIC4.13□□□□□ -1.75
Ccdc9bA3KGF9 Gm22337-201ENSMUST00000157721 132 ntBASIC4.13□□□□□ -1.75
Ccdc9bA3KGF9 Gm22211-201ENSMUST00000158097 156 ntBASIC4.13□□□□□ -1.75
Ccdc9bA3KGF9 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Ccdc9bA3KGF9 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Ccdc9bA3KGF9 Gm23002-201ENSMUST00000179221 107 ntBASIC4.13□□□□□ -1.75
Ccdc9bA3KGF9 Gm27476-201ENSMUST00000183366 104 ntBASIC4.13□□□□□ -1.75
Ccdc9bA3KGF9 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC4.13□□□□□ -1.75
Ccdc9bA3KGF9 Gm44816-201ENSMUST00000206666 477 ntBASIC4.13□□□□□ -1.75
Ccdc9bA3KGF9 Gm6842-201ENSMUST00000211361 390 ntBASIC4.13□□□□□ -1.75
Ccdc9bA3KGF9 Apoo-ps-201ENSMUST00000061241 586 ntBASIC4.13□□□□□ -1.75
Ccdc9bA3KGF9 Gm44439-201ENSMUST00000203379 3592 ntBASIC4.13□□□□□ -1.75
Ccdc9bA3KGF9 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
Ccdc9bA3KGF9 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Ccdc9bA3KGF9 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
Ccdc9bA3KGF9 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Ccdc9bA3KGF9 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Ccdc9bA3KGF9 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC4.13□□□□□ -1.75
Ccdc9bA3KGF9 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC4.13□□□□□ -1.75
Ccdc9bA3KGF9 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Ccdc9bA3KGF9 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Ccdc9bA3KGF9 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Ccdc9bA3KGF9 Gm43508-201ENSMUST00000197251 3783 ntBASIC4.12□□□□□ -1.75
Ccdc9bA3KGF9 AC156560.3-201ENSMUST00000222978 3841 ntBASIC4.12□□□□□ -1.75
Ccdc9bA3KGF9 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Ccdc9bA3KGF9 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Ccdc9bA3KGF9 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
Ccdc9bA3KGF9 Gm37204-201ENSMUST00000192389 3961 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 89.6 ms