Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm6079-201ENSMUST00000121356 404 ntBASIC4.05□□□□□ -1.76
Nkx6-1Q99MA9 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Nkx6-1Q99MA9 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Nkx6-1Q99MA9 Gm18520-201ENSMUST00000174783 658 ntBASIC4.05□□□□□ -1.76
Nkx6-1Q99MA9 Mir1251-201ENSMUST00000175486 84 ntBASIC4.05□□□□□ -1.76
Nkx6-1Q99MA9 Gm20698-201ENSMUST00000175657 233 ntBASIC4.05□□□□□ -1.76
Nkx6-1Q99MA9 Gm25450-201ENSMUST00000179144 107 ntBASIC4.05□□□□□ -1.76
Nkx6-1Q99MA9 Mir6383-201ENSMUST00000184545 116 ntBASIC4.05□□□□□ -1.76
Nkx6-1Q99MA9 Gm27952-201ENSMUST00000184748 105 ntBASIC4.05□□□□□ -1.76
Nkx6-1Q99MA9 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC4.05□□□□□ -1.76
Nkx6-1Q99MA9 Gm28755-201ENSMUST00000185773 199 ntBASIC4.05□□□□□ -1.76
Nkx6-1Q99MA9 Gm37162-201ENSMUST00000191708 551 ntBASIC4.05□□□□□ -1.76
Nkx6-1Q99MA9 Gm44030-201ENSMUST00000204865 432 ntBASIC4.05□□□□□ -1.76
Nkx6-1Q99MA9 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC4.05□□□□□ -1.76
Nkx6-1Q99MA9 Gm6240-201ENSMUST00000208014 473 ntBASIC4.05□□□□□ -1.76
Nkx6-1Q99MA9 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Nkx6-1Q99MA9 AC139750.2-201ENSMUST00000224424 386 ntBASIC4.05□□□□□ -1.76
Nkx6-1Q99MA9 Gm26457-201ENSMUST00000082678 78 ntBASIC4.05□□□□□ -1.76
Nkx6-1Q99MA9 Gm23042-201ENSMUST00000083866 101 ntBASIC4.05□□□□□ -1.76
Nkx6-1Q99MA9 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC4.05□□□□□ -1.76
Nkx6-1Q99MA9 Gm15102-201ENSMUST00000118740 1502 ntBASIC4.05□□□□□ -1.76
Nkx6-1Q99MA9 Gm45884-201ENSMUST00000209540 3416 ntBASIC4.05□□□□□ -1.76
Nkx6-1Q99MA9 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
Nkx6-1Q99MA9 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Nkx6-1Q99MA9 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Nkx6-1Q99MA9 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Nkx6-1Q99MA9 Gm42927-201ENSMUST00000200624 3841 ntBASIC4.04□□□□□ -1.76
Nkx6-1Q99MA9 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Nkx6-1Q99MA9 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC4.04□□□□□ -1.76
Nkx6-1Q99MA9 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Nkx6-1Q99MA9 Mir881-201ENSMUST00000104844 78 ntBASIC4.04□□□□□ -1.76
Nkx6-1Q99MA9 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Nkx6-1Q99MA9 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC4.04□□□□□ -1.76
Nkx6-1Q99MA9 Gm14551-201ENSMUST00000120802 256 ntBASIC4.04□□□□□ -1.76
Nkx6-1Q99MA9 Gm15223-201ENSMUST00000120989 826 ntBASIC4.04□□□□□ -1.76
Nkx6-1Q99MA9 Gm25908-201ENSMUST00000157624 98 ntBASIC4.04□□□□□ -1.76
Nkx6-1Q99MA9 Gm23865-201ENSMUST00000157723 97 ntBASIC4.04□□□□□ -1.76
Nkx6-1Q99MA9 Gm22433-201ENSMUST00000158550 142 ntBASIC4.04□□□□□ -1.76
Nkx6-1Q99MA9 Ear-ps4-201ENSMUST00000166834 450 ntBASIC4.04□□□□□ -1.76
Nkx6-1Q99MA9 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Nkx6-1Q99MA9 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Nkx6-1Q99MA9 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC4.04□□□□□ -1.76
Nkx6-1Q99MA9 CT485612.4-201ENSMUST00000223405 250 ntBASIC4.04□□□□□ -1.76
Nkx6-1Q99MA9 Gm10139-201ENSMUST00000081471 171 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Nkx6-1Q99MA9 Gm23625-201ENSMUST00000082457 100 ntBASIC4.04□□□□□ -1.76
Nkx6-1Q99MA9 Gm23678-201ENSMUST00000083157 107 ntBASIC4.04□□□□□ -1.76
Nkx6-1Q99MA9 Gm23461-201ENSMUST00000083265 107 ntBASIC4.04□□□□□ -1.76
Nkx6-1Q99MA9 Gm8995-201ENSMUST00000184842 7280 ntBASIC4.04□□□□□ -1.76
Nkx6-1Q99MA9 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
Nkx6-1Q99MA9 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Nkx6-1Q99MA9 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Nkx6-1Q99MA9 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Nkx6-1Q99MA9 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Nkx6-1Q99MA9 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Nkx6-1Q99MA9 AC153964.1-201ENSMUST00000219677 3142 ntBASIC4.04□□□□□ -1.76
Nkx6-1Q99MA9 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Nkx6-1Q99MA9 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
Nkx6-1Q99MA9 Gm44283-201ENSMUST00000204461 3950 ntBASIC4.03□□□□□ -1.76
Nkx6-1Q99MA9 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
Nkx6-1Q99MA9 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
Nkx6-1Q99MA9 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Nkx6-1Q99MA9 Gm24788-201ENSMUST00000104283 156 ntBASIC4.03□□□□□ -1.76
Nkx6-1Q99MA9 Gm25727-201ENSMUST00000104522 131 ntBASIC4.03□□□□□ -1.76
Nkx6-1Q99MA9 Gm12335-201ENSMUST00000119738 327 ntBASIC4.03□□□□□ -1.76
Nkx6-1Q99MA9 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC4.03□□□□□ -1.76
Nkx6-1Q99MA9 Gm11448-201ENSMUST00000120427 450 ntBASIC4.03□□□□□ -1.76
Nkx6-1Q99MA9 Gm25428-201ENSMUST00000157608 114 ntBASIC4.03□□□□□ -1.76
Nkx6-1Q99MA9 Gm25454-201ENSMUST00000157947 315 ntBASIC4.03□□□□□ -1.76
Nkx6-1Q99MA9 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC4.03□□□□□ -1.76
Nkx6-1Q99MA9 Gm3370-201ENSMUST00000171785 500 ntBASIC4.03□□□□□ -1.76
Nkx6-1Q99MA9 Gm23215-201ENSMUST00000178153 121 ntBASIC4.03□□□□□ -1.76
Nkx6-1Q99MA9 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC4.03□□□□□ -1.76
Nkx6-1Q99MA9 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC4.03□□□□□ -1.76
Nkx6-1Q99MA9 Gm38332-201ENSMUST00000194189 147 ntBASIC4.03□□□□□ -1.76
Nkx6-1Q99MA9 Gm6615-201ENSMUST00000199426 631 ntBASIC4.03□□□□□ -1.76
Nkx6-1Q99MA9 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC4.03□□□□□ -1.76
Nkx6-1Q99MA9 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC4.03□□□□□ -1.76
Nkx6-1Q99MA9 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC4.03□□□□□ -1.76
Nkx6-1Q99MA9 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC4.03□□□□□ -1.76
Nkx6-1Q99MA9 Gm7422-201ENSMUST00000220115 640 ntBASIC4.03□□□□□ -1.76
Nkx6-1Q99MA9 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC4.03□□□□□ -1.76
Nkx6-1Q99MA9 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC4.03□□□□□ -1.76
Nkx6-1Q99MA9 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Nkx6-1Q99MA9 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Nkx6-1Q99MA9 Gm37045-201ENSMUST00000192016 2463 ntBASIC4.03□□□□□ -1.76
Nkx6-1Q99MA9 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Nkx6-1Q99MA9 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
Nkx6-1Q99MA9 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC4.03□□□□□ -1.77
Nkx6-1Q99MA9 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC4.02□□□□□ -1.77
Nkx6-1Q99MA9 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Nkx6-1Q99MA9 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Nkx6-1Q99MA9 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Nkx6-1Q99MA9 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Nkx6-1Q99MA9 Gm10811-201ENSMUST00000221985 2448 ntBASIC4.02□□□□□ -1.77
Nkx6-1Q99MA9 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Nkx6-1Q99MA9 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Nkx6-1Q99MA9 Gm23271-201ENSMUST00000104052 124 ntBASIC4.02□□□□□ -1.77
Nkx6-1Q99MA9 Gm24172-201ENSMUST00000104127 117 ntBASIC4.02□□□□□ -1.77
Nkx6-1Q99MA9 Gm23836-201ENSMUST00000104434 129 ntBASIC4.02□□□□□ -1.77
Nkx6-1Q99MA9 Gm16218-201ENSMUST00000155424 388 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms