Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm43441-201ENSMUST00000201458 205 ntBASIC4.98□□□□□ -1.61
Trim47Q8C0E3 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Trim47Q8C0E3 Gm24204-201ENSMUST00000082950 107 ntBASIC4.98□□□□□ -1.61
Trim47Q8C0E3 Gm22294-201ENSMUST00000083308 104 ntBASIC4.98□□□□□ -1.61
Trim47Q8C0E3 Gm23875-201ENSMUST00000083711 318 ntBASIC4.98□□□□□ -1.61
Trim47Q8C0E3 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Trim47Q8C0E3 Gm42842-201ENSMUST00000197736 3004 ntBASIC4.98□□□□□ -1.61
Trim47Q8C0E3 Gm32444-201ENSMUST00000195147 3511 ntBASIC4.98□□□□□ -1.61
Trim47Q8C0E3 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Trim47Q8C0E3 Gm17976-201ENSMUST00000184037 1909 ntBASIC4.97□□□□□ -1.61
Trim47Q8C0E3 Gm42482-201ENSMUST00000198904 1947 ntBASIC4.97□□□□□ -1.61
Trim47Q8C0E3 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Trim47Q8C0E3 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
Trim47Q8C0E3 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Trim47Q8C0E3 Gm43197-201ENSMUST00000201493 2583 ntBASIC4.97□□□□□ -1.61
Trim47Q8C0E3 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Trim47Q8C0E3 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Trim47Q8C0E3 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Trim47Q8C0E3 Gm23746-201ENSMUST00000104229 125 ntBASIC4.97□□□□□ -1.61
Trim47Q8C0E3 Gm25377-201ENSMUST00000104334 129 ntBASIC4.97□□□□□ -1.61
Trim47Q8C0E3 Gm22496-201ENSMUST00000104493 88 ntBASIC4.97□□□□□ -1.61
Trim47Q8C0E3 Mir1193-201ENSMUST00000116761 121 ntBASIC4.97□□□□□ -1.61
Trim47Q8C0E3 Gm15148-201ENSMUST00000117602 156 ntBASIC4.97□□□□□ -1.61
Trim47Q8C0E3 Gm14688-201ENSMUST00000119169 303 ntBASIC4.97□□□□□ -1.61
Trim47Q8C0E3 Gm14067-201ENSMUST00000119340 314 ntBASIC4.97□□□□□ -1.61
Trim47Q8C0E3 Gm11785-201ENSMUST00000120165 601 ntBASIC4.97□□□□□ -1.61
Trim47Q8C0E3 Gm7308-201ENSMUST00000121087 447 ntBASIC4.97□□□□□ -1.61
Trim47Q8C0E3 Gm12617-201ENSMUST00000121268 381 ntBASIC4.97□□□□□ -1.61
Trim47Q8C0E3 Gm13419-201ENSMUST00000121711 271 ntBASIC4.97□□□□□ -1.61
Trim47Q8C0E3 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Trim47Q8C0E3 Gm16250-201ENSMUST00000148974 256 ntBASIC4.97□□□□□ -1.61
Trim47Q8C0E3 Gm23496-201ENSMUST00000157741 248 ntBASIC4.97□□□□□ -1.61
Trim47Q8C0E3 Gm24537-201ENSMUST00000157950 102 ntBASIC4.97□□□□□ -1.61
Trim47Q8C0E3 Gm22943-201ENSMUST00000158564 76 ntBASIC4.97□□□□□ -1.61
Trim47Q8C0E3 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC4.97□□□□□ -1.61
Trim47Q8C0E3 Gm7909-201ENSMUST00000182688 614 ntBASIC4.97□□□□□ -1.61
Trim47Q8C0E3 Gm29429-201ENSMUST00000187071 121 ntBASIC4.97□□□□□ -1.61
Trim47Q8C0E3 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC4.97□□□□□ -1.61
Trim47Q8C0E3 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC4.97□□□□□ -1.61
Trim47Q8C0E3 Gm45553-201ENSMUST00000209929 507 ntBASIC4.97□□□□□ -1.61
Trim47Q8C0E3 Gm17779-201ENSMUST00000213395 394 ntBASIC4.97□□□□□ -1.61
Trim47Q8C0E3 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Trim47Q8C0E3 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
Trim47Q8C0E3 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Trim47Q8C0E3 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Trim47Q8C0E3 Gm37006-201ENSMUST00000195253 2674 ntBASIC4.97□□□□□ -1.61
Trim47Q8C0E3 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Trim47Q8C0E3 Vmn1r167-202ENSMUST00000227713 2677 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Trim47Q8C0E3 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.61
Trim47Q8C0E3 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC4.96□□□□□ -1.61
Trim47Q8C0E3 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Trim47Q8C0E3 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Trim47Q8C0E3 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC4.96□□□□□ -1.62
Trim47Q8C0E3 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC4.96□□□□□ -1.62
Trim47Q8C0E3 Gm5258-201ENSMUST00000165437 327 ntBASIC4.96□□□□□ -1.62
Trim47Q8C0E3 Gm26195-201ENSMUST00000175035 101 ntBASIC4.96□□□□□ -1.62
Trim47Q8C0E3 Mir465d-201ENSMUST00000196314 58 ntBASIC4.96□□□□□ -1.62
Trim47Q8C0E3 Gm8820-201ENSMUST00000204077 571 ntBASIC4.96□□□□□ -1.62
Trim47Q8C0E3 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Trim47Q8C0E3 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC4.96□□□□□ -1.62
Trim47Q8C0E3 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC4.96□□□□□ -1.62
Trim47Q8C0E3 Gm6462-201ENSMUST00000081488 304 ntBASIC4.96□□□□□ -1.62
Trim47Q8C0E3 Gm23464-201ENSMUST00000083145 147 ntBASIC4.96□□□□□ -1.62
Trim47Q8C0E3 Gm25821-201ENSMUST00000093657 133 ntBASIC4.96□□□□□ -1.62
Trim47Q8C0E3 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC4.96□□□□□ -1.62
Trim47Q8C0E3 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Trim47Q8C0E3 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
Trim47Q8C0E3 Gm38259-201ENSMUST00000194602 3534 ntBASIC4.96□□□□□ -1.62
Trim47Q8C0E3 Gm43605-201ENSMUST00000199663 3426 ntBASIC4.96□□□□□ -1.62
Trim47Q8C0E3 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Trim47Q8C0E3 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Trim47Q8C0E3 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
Trim47Q8C0E3 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC4.95□□□□□ -1.62
Trim47Q8C0E3 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Trim47Q8C0E3 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC4.95□□□□□ -1.62
Trim47Q8C0E3 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC4.95□□□□□ -1.62
Trim47Q8C0E3 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
Trim47Q8C0E3 Gm42528-201ENSMUST00000200697 3418 ntBASIC4.95□□□□□ -1.62
Trim47Q8C0E3 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Trim47Q8C0E3 Gm24116-201ENSMUST00000103975 107 ntBASIC4.95□□□□□ -1.62
Trim47Q8C0E3 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC4.95□□□□□ -1.62
Trim47Q8C0E3 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Trim47Q8C0E3 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC4.95□□□□□ -1.62
Trim47Q8C0E3 Gm25637-201ENSMUST00000157529 107 ntBASIC4.95□□□□□ -1.62
Trim47Q8C0E3 Gm23752-201ENSMUST00000157584 115 ntBASIC4.95□□□□□ -1.62
Trim47Q8C0E3 Gm25224-201ENSMUST00000158195 68 ntBASIC4.95□□□□□ -1.62
Trim47Q8C0E3 Gm22367-201ENSMUST00000178930 132 ntBASIC4.95□□□□□ -1.62
Trim47Q8C0E3 Gm43978-201ENSMUST00000203491 451 ntBASIC4.95□□□□□ -1.62
Trim47Q8C0E3 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC4.95□□□□□ -1.62
Trim47Q8C0E3 Gm23932-201ENSMUST00000082914 107 ntBASIC4.95□□□□□ -1.62
Trim47Q8C0E3 Gm23099-201ENSMUST00000083454 139 ntBASIC4.95□□□□□ -1.62
Trim47Q8C0E3 Mir133a-1-201ENSMUST00000083465 68 ntBASIC4.95□□□□□ -1.62
Trim47Q8C0E3 Gm22155-201ENSMUST00000083836 162 ntBASIC4.95□□□□□ -1.62
Trim47Q8C0E3 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
Trim47Q8C0E3 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Trim47Q8C0E3 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Trim47Q8C0E3 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC4.95□□□□□ -1.62
Trim47Q8C0E3 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Trim47Q8C0E3 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Trim47Q8C0E3 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC4.95□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms