Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Trim35Q8C006 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
Trim35Q8C006 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
Trim35Q8C006 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Trim35Q8C006 Gm37677-201ENSMUST00000194520 7634 ntBASIC5.73□□□□□ -1.49
Trim35Q8C006 Gm25061-201ENSMUST00000104665 107 ntBASIC5.73□□□□□ -1.49
Trim35Q8C006 Gm26249-201ENSMUST00000116708 118 ntBASIC5.73□□□□□ -1.49
Trim35Q8C006 Gm7927-201ENSMUST00000118818 880 ntBASIC5.73□□□□□ -1.49
Trim35Q8C006 Snord11-201ENSMUST00000158468 84 ntBASIC5.73□□□□□ -1.49
Trim35Q8C006 Gm37375-201ENSMUST00000193859 387 ntBASIC5.73□□□□□ -1.49
Trim35Q8C006 Gm37385-201ENSMUST00000195223 387 ntBASIC5.73□□□□□ -1.49
Trim35Q8C006 Ighv1-44-201ENSMUST00000195597 352 ntBASIC5.73□□□□□ -1.49
Trim35Q8C006 Gm44049-201ENSMUST00000204905 2984 ntBASIC5.73□□□□□ -1.49
Trim35Q8C006 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Trim35Q8C006 n-R5s65-201ENSMUST00000082614 117 ntBASIC5.73□□□□□ -1.49
Trim35Q8C006 Mir298-201ENSMUST00000083476 82 ntBASIC5.73□□□□□ -1.49
Trim35Q8C006 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
Trim35Q8C006 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Trim35Q8C006 AC130827.1-201ENSMUST00000220476 3850 ntBASIC5.73□□□□□ -1.49
Trim35Q8C006 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC5.73□□□□□ -1.49
Trim35Q8C006 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Trim35Q8C006 Gm42798-201ENSMUST00000200853 3972 ntBASIC5.73□□□□□ -1.49
Trim35Q8C006 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Trim35Q8C006 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Trim35Q8C006 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Trim35Q8C006 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Trim35Q8C006 Gm25323-201ENSMUST00000122555 103 ntBASIC5.72□□□□□ -1.49
Trim35Q8C006 Gm23225-201ENSMUST00000158121 114 ntBASIC5.72□□□□□ -1.49
Trim35Q8C006 AC136457.1-201ENSMUST00000224195 156 ntBASIC5.72□□□□□ -1.49
Trim35Q8C006 Gm23737-201ENSMUST00000082547 159 ntBASIC5.72□□□□□ -1.49
Trim35Q8C006 Gm22972-201ENSMUST00000083297 131 ntBASIC5.72□□□□□ -1.49
Trim35Q8C006 Mir412-201ENSMUST00000083636 80 ntBASIC5.72□□□□□ -1.49
Trim35Q8C006 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Trim35Q8C006 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC5.72□□□□□ -1.49
Trim35Q8C006 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Trim35Q8C006 AC161250.2-201ENSMUST00000215114 3107 ntBASIC5.72□□□□□ -1.49
Trim35Q8C006 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Trim35Q8C006 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
Trim35Q8C006 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Trim35Q8C006 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Trim35Q8C006 Gm16332-201ENSMUST00000134229 2967 ntBASIC5.71□□□□□ -1.49
Trim35Q8C006 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC5.71□□□□□ -1.5
Trim35Q8C006 AC105407.2-201ENSMUST00000223707 3911 ntBASIC5.71□□□□□ -1.5
Trim35Q8C006 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
Trim35Q8C006 Mir711-201ENSMUST00000102188 82 ntBASIC5.71□□□□□ -1.5
Trim35Q8C006 Mir466f-4-201ENSMUST00000116930 121 ntBASIC5.71□□□□□ -1.5
Trim35Q8C006 Gm11333-201ENSMUST00000119479 148 ntBASIC5.71□□□□□ -1.5
Trim35Q8C006 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC5.71□□□□□ -1.5
Trim35Q8C006 Gm15214-201ENSMUST00000122155 470 ntBASIC5.71□□□□□ -1.5
Trim35Q8C006 Eif5al3-ps-201ENSMUST00000135410 447 ntBASIC5.71□□□□□ -1.5
Trim35Q8C006 Gm26106-201ENSMUST00000157254 228 ntBASIC5.71□□□□□ -1.5
Trim35Q8C006 Gm23539-201ENSMUST00000157537 224 ntBASIC5.71□□□□□ -1.5
Trim35Q8C006 Gm25887-201ENSMUST00000157777 84 ntBASIC5.71□□□□□ -1.5
Trim35Q8C006 Gm22522-201ENSMUST00000158271 151 ntBASIC5.71□□□□□ -1.5
Trim35Q8C006 Gm25445-201ENSMUST00000158996 299 ntBASIC5.71□□□□□ -1.5
Trim35Q8C006 Gm20401-201ENSMUST00000173717 212 ntBASIC5.71□□□□□ -1.5
Trim35Q8C006 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC5.71□□□□□ -1.5
Trim35Q8C006 Gm27987-201ENSMUST00000184023 93 ntBASIC5.71□□□□□ -1.5
Trim35Q8C006 Gm19563-201ENSMUST00000222031 270 ntBASIC5.71□□□□□ -1.5
Trim35Q8C006 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Trim35Q8C006 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
Trim35Q8C006 Epha4-204ENSMUST00000188797 3612 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Trim35Q8C006 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Trim35Q8C006 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
Trim35Q8C006 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Trim35Q8C006 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC5.71□□□□□ -1.5
Trim35Q8C006 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Trim35Q8C006 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Trim35Q8C006 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trim35Q8C006 Gm45265-201ENSMUST00000210852 2497 ntBASIC5.7□□□□□ -1.5
Trim35Q8C006 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Trim35Q8C006 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trim35Q8C006 Gm26984-201ENSMUST00000182345 3510 ntBASIC5.7□□□□□ -1.5
Trim35Q8C006 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trim35Q8C006 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Trim35Q8C006 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Trim35Q8C006 Gm23294-201ENSMUST00000104150 164 ntBASIC5.7□□□□□ -1.5
Trim35Q8C006 Gm22772-201ENSMUST00000104451 121 ntBASIC5.7□□□□□ -1.5
Trim35Q8C006 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
Trim35Q8C006 Gm12488-201ENSMUST00000122449 499 ntBASIC5.7□□□□□ -1.5
Trim35Q8C006 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC5.7□□□□□ -1.5
Trim35Q8C006 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Trim35Q8C006 Gm44326-201ENSMUST00000198226 101 ntBASIC5.7□□□□□ -1.5
Trim35Q8C006 Gm42961-201ENSMUST00000202023 181 ntBASIC5.7□□□□□ -1.5
Trim35Q8C006 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC5.7□□□□□ -1.5
Trim35Q8C006 Gm5548-201ENSMUST00000055878 397 ntBASIC5.7□□□□□ -1.5
Trim35Q8C006 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trim35Q8C006 Gm21037-201ENSMUST00000209086 2608 ntBASIC5.7□□□□□ -1.5
Trim35Q8C006 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Trim35Q8C006 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Trim35Q8C006 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Trim35Q8C006 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Trim35Q8C006 Gm42801-201ENSMUST00000202562 2865 ntBASIC5.69□□□□□ -1.5
Trim35Q8C006 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Trim35Q8C006 AC154573.1-201ENSMUST00000225913 4659 ntBASIC5.69□□□□□ -1.5
Trim35Q8C006 Fam111a-201ENSMUST00000025595 3267 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Trim35Q8C006 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Trim35Q8C006 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Trim35Q8C006 Gm43881-201ENSMUST00000203051 2530 ntBASIC5.69□□□□□ -1.5
Trim35Q8C006 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 91.2 ms