Protein–RNA interactions for Protein: P28357

Hoxd9, Homeobox protein Hox-D9, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd9P28357 Gm22177-201ENSMUST00000175002 158 ntBASIC4.35□□□□□ -1.71
Hoxd9P28357 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC4.35□□□□□ -1.71
Hoxd9P28357 Gm37733-201ENSMUST00000195478 2962 ntBASIC4.35□□□□□ -1.71
Hoxd9P28357 Gm2522-201ENSMUST00000204280 322 ntBASIC4.35□□□□□ -1.71
Hoxd9P28357 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC4.35□□□□□ -1.71
Hoxd9P28357 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC4.35□□□□□ -1.71
Hoxd9P28357 Gm23932-201ENSMUST00000082914 107 ntBASIC4.35□□□□□ -1.71
Hoxd9P28357 Gm24204-201ENSMUST00000082950 107 ntBASIC4.35□□□□□ -1.71
Hoxd9P28357 Gm22350-201ENSMUST00000083924 156 ntBASIC4.35□□□□□ -1.71
Hoxd9P28357 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Hoxd9P28357 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Hoxd9P28357 Gm43197-201ENSMUST00000201493 2583 ntBASIC4.35□□□□□ -1.71
Hoxd9P28357 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Hoxd9P28357 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
Hoxd9P28357 Gm38125-201ENSMUST00000194136 3438 ntBASIC4.34□□□□□ -1.71
Hoxd9P28357 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
Hoxd9P28357 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC4.34□□□□□ -1.71
Hoxd9P28357 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
Hoxd9P28357 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Hoxd9P28357 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC4.34□□□□□ -1.71
Hoxd9P28357 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Hoxd9P28357 Gm37718-201ENSMUST00000191655 2631 ntBASIC4.34□□□□□ -1.71
Hoxd9P28357 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Hoxd9P28357 AC152159.1-201ENSMUST00000226719 2769 ntBASIC4.34□□□□□ -1.71
Hoxd9P28357 Gm11251-201ENSMUST00000119593 2800 ntBASIC4.34□□□□□ -1.71
Hoxd9P28357 AC153801.2-201ENSMUST00000219875 3372 ntBASIC4.34□□□□□ -1.71
Hoxd9P28357 Gm44230-201ENSMUST00000203032 3550 ntBASIC4.34□□□□□ -1.71
Hoxd9P28357 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Hoxd9P28357 Gm24951-201ENSMUST00000102182 109 ntBASIC4.34□□□□□ -1.71
Hoxd9P28357 Gm23193-201ENSMUST00000102427 82 ntBASIC4.34□□□□□ -1.71
Hoxd9P28357 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Hoxd9P28357 Gm25377-201ENSMUST00000104334 129 ntBASIC4.34□□□□□ -1.71
Hoxd9P28357 Gm13419-201ENSMUST00000121711 271 ntBASIC4.34□□□□□ -1.71
Hoxd9P28357 Hba-ps4-201ENSMUST00000128900 447 ntBASIC4.34□□□□□ -1.71
Hoxd9P28357 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC4.34□□□□□ -1.71
Hoxd9P28357 Gm22601-201ENSMUST00000157595 250 ntBASIC4.34□□□□□ -1.71
Hoxd9P28357 Gm24507-201ENSMUST00000157683 134 ntBASIC4.34□□□□□ -1.71
Hoxd9P28357 Gm22654-201ENSMUST00000157874 105 ntBASIC4.34□□□□□ -1.71
Hoxd9P28357 Gm24537-201ENSMUST00000157950 102 ntBASIC4.34□□□□□ -1.71
Hoxd9P28357 Gm22726-201ENSMUST00000158089 179 ntBASIC4.34□□□□□ -1.71
Hoxd9P28357 Gm24885-201ENSMUST00000158783 270 ntBASIC4.34□□□□□ -1.71
Hoxd9P28357 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC4.34□□□□□ -1.71
Hoxd9P28357 Mir5129-201ENSMUST00000174938 78 ntBASIC4.34□□□□□ -1.71
Hoxd9P28357 Mir6418-201ENSMUST00000185075 115 ntBASIC4.34□□□□□ -1.71
Hoxd9P28357 Gm3145-201ENSMUST00000188584 220 ntBASIC4.34□□□□□ -1.71
Hoxd9P28357 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC4.34□□□□□ -1.71
Hoxd9P28357 Gm44879-201ENSMUST00000207007 503 ntBASIC4.34□□□□□ -1.71
Hoxd9P28357 Gm45651-201ENSMUST00000210857 335 ntBASIC4.34□□□□□ -1.71
Hoxd9P28357 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Hoxd9P28357 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Hoxd9P28357 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.72
Hoxd9P28357 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
Hoxd9P28357 BC051076-202ENSMUST00000199477 2868 ntBASIC4.34□□□□□ -1.72
Hoxd9P28357 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Hoxd9P28357 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Hoxd9P28357 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
Hoxd9P28357 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
Hoxd9P28357 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC4.33□□□□□ -1.72
Hoxd9P28357 Gm38269-201ENSMUST00000194549 3298 ntBASIC4.33□□□□□ -1.72
Hoxd9P28357 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Hoxd9P28357 Gm2123-201ENSMUST00000221476 2836 ntBASIC4.33□□□□□ -1.72
Hoxd9P28357 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
Hoxd9P28357 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Hoxd9P28357 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Hoxd9P28357 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Hoxd9P28357 Gm23709-201ENSMUST00000104364 130 ntBASIC4.33□□□□□ -1.72
Hoxd9P28357 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC4.33□□□□□ -1.72
Hoxd9P28357 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Hoxd9P28357 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC4.33□□□□□ -1.72
Hoxd9P28357 Gm25665-201ENSMUST00000157695 110 ntBASIC4.33□□□□□ -1.72
Hoxd9P28357 Gm24905-201ENSMUST00000158129 104 ntBASIC4.33□□□□□ -1.72
Hoxd9P28357 Gm16318-201ENSMUST00000162402 601 ntBASIC4.33□□□□□ -1.72
Hoxd9P28357 Gm22367-201ENSMUST00000178930 132 ntBASIC4.33□□□□□ -1.72
Hoxd9P28357 Gm7909-201ENSMUST00000182688 614 ntBASIC4.33□□□□□ -1.72
Hoxd9P28357 Gm44474-201ENSMUST00000196525 127 ntBASIC4.33□□□□□ -1.72
Hoxd9P28357 Gm43978-201ENSMUST00000203491 451 ntBASIC4.33□□□□□ -1.72
Hoxd9P28357 Gm7726-201ENSMUST00000206241 231 ntBASIC4.33□□□□□ -1.72
Hoxd9P28357 Gm46138-201ENSMUST00000215294 426 ntBASIC4.33□□□□□ -1.72
Hoxd9P28357 Gm8942-201ENSMUST00000217892 400 ntBASIC4.33□□□□□ -1.72
Hoxd9P28357 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC4.33□□□□□ -1.72
Hoxd9P28357 Mir133a-1-201ENSMUST00000083465 68 ntBASIC4.33□□□□□ -1.72
Hoxd9P28357 Gm43705-201ENSMUST00000195958 3717 ntBASIC4.33□□□□□ -1.72
Hoxd9P28357 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Hoxd9P28357 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
Hoxd9P28357 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
Hoxd9P28357 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Hoxd9P28357 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
Hoxd9P28357 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Hoxd9P28357 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Hoxd9P28357 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
Hoxd9P28357 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Hoxd9P28357 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Hoxd9P28357 Gm17131-201ENSMUST00000164420 3846 ntBASIC4.32□□□□□ -1.72
Hoxd9P28357 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
Hoxd9P28357 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
Hoxd9P28357 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Hoxd9P28357 Gm23014-201ENSMUST00000104144 130 ntBASIC4.32□□□□□ -1.72
Hoxd9P28357 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC4.32□□□□□ -1.72
Hoxd9P28357 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC4.32□□□□□ -1.72
Hoxd9P28357 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 93.8 ms