Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Gm37478-201ENSMUST00000193624 3495 ntBASIC4.68□□□□□ -1.66
Msx1P13297 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Msx1P13297 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
Msx1P13297 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Msx1P13297 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Msx1P13297 Gm43462-201ENSMUST00000200265 3648 ntBASIC4.67□□□□□ -1.66
Msx1P13297 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Msx1P13297 Gm38260-201ENSMUST00000193573 3995 ntBASIC4.67□□□□□ -1.66
Msx1P13297 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Msx1P13297 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Msx1P13297 Gm11448-201ENSMUST00000120427 450 ntBASIC4.67□□□□□ -1.66
Msx1P13297 Gm6762-201ENSMUST00000121769 289 ntBASIC4.67□□□□□ -1.66
Msx1P13297 Gm25543-201ENSMUST00000122678 312 ntBASIC4.67□□□□□ -1.66
Msx1P13297 n-R5s216-201ENSMUST00000122755 112 ntBASIC4.67□□□□□ -1.66
Msx1P13297 Mir1942-201ENSMUST00000157274 63 ntBASIC4.67□□□□□ -1.66
Msx1P13297 Gm24905-201ENSMUST00000158129 104 ntBASIC4.67□□□□□ -1.66
Msx1P13297 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC4.67□□□□□ -1.66
Msx1P13297 Gm37682-201ENSMUST00000191776 522 ntBASIC4.67□□□□□ -1.66
Msx1P13297 Gm37030-201ENSMUST00000194254 295 ntBASIC4.67□□□□□ -1.66
Msx1P13297 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC4.67□□□□□ -1.66
Msx1P13297 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC4.67□□□□□ -1.66
Msx1P13297 AC241593.2-201ENSMUST00000225099 510 ntBASIC4.67□□□□□ -1.66
Msx1P13297 Gm23453-201ENSMUST00000083326 106 ntBASIC4.67□□□□□ -1.66
Msx1P13297 n-R5s170-201ENSMUST00000083726 113 ntBASIC4.67□□□□□ -1.66
Msx1P13297 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC4.67□□□□□ -1.66
Msx1P13297 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Msx1P13297 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC4.67□□□□□ -1.66
Msx1P13297 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
Msx1P13297 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Msx1P13297 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
Msx1P13297 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC4.67□□□□□ -1.66
Msx1P13297 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Msx1P13297 Gm43188-201ENSMUST00000200180 2160 ntBASIC4.67□□□□□ -1.66
Msx1P13297 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
Msx1P13297 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC4.67□□□□□ -1.66
Msx1P13297 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC4.66□□□□□ -1.66
Msx1P13297 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Msx1P13297 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Msx1P13297 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Msx1P13297 Gm23608-201ENSMUST00000104545 128 ntBASIC4.66□□□□□ -1.66
Msx1P13297 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC4.66□□□□□ -1.66
Msx1P13297 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Msx1P13297 Gm22225-201ENSMUST00000157358 278 ntBASIC4.66□□□□□ -1.66
Msx1P13297 Gm23536-201ENSMUST00000157541 134 ntBASIC4.66□□□□□ -1.66
Msx1P13297 Ang-ps3-201ENSMUST00000177964 433 ntBASIC4.66□□□□□ -1.66
Msx1P13297 Gm24926-201ENSMUST00000178053 79 ntBASIC4.66□□□□□ -1.66
Msx1P13297 Ang-ps2-201ENSMUST00000178173 433 ntBASIC4.66□□□□□ -1.66
Msx1P13297 Gm22632-201ENSMUST00000178266 79 ntBASIC4.66□□□□□ -1.66
Msx1P13297 Mir6391-201ENSMUST00000184391 104 ntBASIC4.66□□□□□ -1.66
Msx1P13297 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC4.66□□□□□ -1.66
Msx1P13297 Gm2497-201ENSMUST00000189539 601 ntBASIC4.66□□□□□ -1.66
Msx1P13297 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC4.66□□□□□ -1.66
Msx1P13297 Gm17966-201ENSMUST00000193453 594 ntBASIC4.66□□□□□ -1.66
Msx1P13297 Gm32536-201ENSMUST00000205209 445 ntBASIC4.66□□□□□ -1.66
Msx1P13297 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Msx1P13297 Gm18015-201ENSMUST00000214879 316 ntBASIC4.66□□□□□ -1.66
Msx1P13297 CU062626.2-201ENSMUST00000223953 274 ntBASIC4.66□□□□□ -1.66
Msx1P13297 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Msx1P13297 Gm23464-201ENSMUST00000083145 147 ntBASIC4.66□□□□□ -1.66
Msx1P13297 Gm26166-201ENSMUST00000083788 107 ntBASIC4.66□□□□□ -1.66
Msx1P13297 Gm24449-201ENSMUST00000083985 106 ntBASIC4.66□□□□□ -1.66
Msx1P13297 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Msx1P13297 AC112274.1-201ENSMUST00000218957 4274 ntBASIC4.66□□□□□ -1.66
Msx1P13297 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Msx1P13297 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC4.66□□□□□ -1.66
Msx1P13297 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Msx1P13297 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Msx1P13297 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Msx1P13297 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Msx1P13297 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Msx1P13297 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Msx1P13297 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Msx1P13297 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Msx1P13297 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Msx1P13297 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Msx1P13297 Gm38010-201ENSMUST00000192592 2784 ntBASIC4.65□□□□□ -1.66
Msx1P13297 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Msx1P13297 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.66
Msx1P13297 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
Msx1P13297 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
Msx1P13297 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Msx1P13297 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Msx1P13297 Gm22148-201ENSMUST00000104445 107 ntBASIC4.65□□□□□ -1.67
Msx1P13297 Gm22373-201ENSMUST00000104584 89 ntBASIC4.65□□□□□ -1.67
Msx1P13297 Mir1298-201ENSMUST00000116681 98 ntBASIC4.65□□□□□ -1.67
Msx1P13297 Gm12039-201ENSMUST00000118219 180 ntBASIC4.65□□□□□ -1.67
Msx1P13297 Gm13922-201ENSMUST00000119505 156 ntBASIC4.65□□□□□ -1.67
Msx1P13297 Gm12190-201ENSMUST00000120001 187 ntBASIC4.65□□□□□ -1.67
Msx1P13297 Gm23906-201ENSMUST00000157573 128 ntBASIC4.65□□□□□ -1.67
Msx1P13297 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Msx1P13297 Mir6907-201ENSMUST00000183764 71 ntBASIC4.65□□□□□ -1.67
Msx1P13297 Gm27690-201ENSMUST00000184596 126 ntBASIC4.65□□□□□ -1.67
Msx1P13297 Gm27611-201ENSMUST00000184690 108 ntBASIC4.65□□□□□ -1.67
Msx1P13297 Gm28685-201ENSMUST00000187545 1101 ntBASIC4.65□□□□□ -1.67
Msx1P13297 Gm9442-201ENSMUST00000194242 319 ntBASIC4.65□□□□□ -1.67
Msx1P13297 Gm37659-201ENSMUST00000194574 111 ntBASIC4.65□□□□□ -1.67
Msx1P13297 Gm43602-201ENSMUST00000196772 300 ntBASIC4.65□□□□□ -1.67
Msx1P13297 Gm45445-201ENSMUST00000209586 232 ntBASIC4.65□□□□□ -1.67
Msx1P13297 Gm22620-201ENSMUST00000082700 133 ntBASIC4.65□□□□□ -1.67
Msx1P13297 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms