Protein–RNA interactions for Protein: O35054

Cldn4, Claudin-4, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn4O35054 Gm26214-201ENSMUST00000158581 107 ntBASIC3.11□□□□□ -1.91
Cldn4O35054 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC3.11□□□□□ -1.91
Cldn4O35054 Gm3370-201ENSMUST00000171785 500 ntBASIC3.11□□□□□ -1.91
Cldn4O35054 Gm23415-201ENSMUST00000175519 83 ntBASIC3.11□□□□□ -1.91
Cldn4O35054 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Cldn4O35054 Gm27999-201ENSMUST00000183539 193 ntBASIC3.11□□□□□ -1.91
Cldn4O35054 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.11□□□□□ -1.91
Cldn4O35054 Gm29602-201ENSMUST00000186887 442 ntBASIC3.11□□□□□ -1.91
Cldn4O35054 Gm37692-201ENSMUST00000192633 232 ntBASIC3.11□□□□□ -1.91
Cldn4O35054 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Cldn4O35054 Gm18964-201ENSMUST00000193013 563 ntBASIC3.11□□□□□ -1.91
Cldn4O35054 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Cldn4O35054 Gm43746-201ENSMUST00000200028 317 ntBASIC3.11□□□□□ -1.91
Cldn4O35054 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC3.11□□□□□ -1.91
Cldn4O35054 Gm19140-201ENSMUST00000209790 421 ntBASIC3.11□□□□□ -1.91
Cldn4O35054 Gm45344-201ENSMUST00000211610 341 ntBASIC3.11□□□□□ -1.91
Cldn4O35054 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Cldn4O35054 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Cldn4O35054 n-R5s94-201ENSMUST00000082573 119 ntBASIC3.11□□□□□ -1.91
Cldn4O35054 Gm23093-201ENSMUST00000083450 102 ntBASIC3.11□□□□□ -1.91
Cldn4O35054 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Cldn4O35054 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Cldn4O35054 Gm44925-201ENSMUST00000208879 2110 ntBASIC3.11□□□□□ -1.91
Cldn4O35054 Gm15697-201ENSMUST00000121946 2902 ntBASIC3.11□□□□□ -1.91
Cldn4O35054 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
Cldn4O35054 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
Cldn4O35054 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Cldn4O35054 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Cldn4O35054 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
Cldn4O35054 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Cldn4O35054 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Cldn4O35054 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.1□□□□□ -1.91
Cldn4O35054 Gm11221-201ENSMUST00000117230 597 ntBASIC3.1□□□□□ -1.91
Cldn4O35054 Gm15399-201ENSMUST00000118055 724 ntBASIC3.1□□□□□ -1.91
Cldn4O35054 Gm9119-201ENSMUST00000118866 495 ntBASIC3.1□□□□□ -1.91
Cldn4O35054 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC3.1□□□□□ -1.91
Cldn4O35054 Gm25909-201ENSMUST00000157619 121 ntBASIC3.1□□□□□ -1.91
Cldn4O35054 Gm24853-201ENSMUST00000158026 121 ntBASIC3.1□□□□□ -1.91
Cldn4O35054 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
Cldn4O35054 Gm25360-201ENSMUST00000178786 191 ntBASIC3.1□□□□□ -1.91
Cldn4O35054 Gm29335-201ENSMUST00000188361 459 ntBASIC3.1□□□□□ -1.91
Cldn4O35054 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Cldn4O35054 Gm19777-201ENSMUST00000191940 358 ntBASIC3.1□□□□□ -1.91
Cldn4O35054 Gm37732-201ENSMUST00000194377 316 ntBASIC3.1□□□□□ -1.91
Cldn4O35054 Gm43812-201ENSMUST00000200976 581 ntTSL 5 BASIC3.1□□□□□ -1.91
Cldn4O35054 Gm44149-201ENSMUST00000204256 226 ntBASIC3.1□□□□□ -1.91
Cldn4O35054 AC140785.1-201ENSMUST00000217782 383 ntBASIC3.1□□□□□ -1.91
Cldn4O35054 AC116589.7-201ENSMUST00000221061 239 ntBASIC3.1□□□□□ -1.91
Cldn4O35054 AC164117.1-201ENSMUST00000221726 239 ntBASIC3.1□□□□□ -1.91
Cldn4O35054 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC3.1□□□□□ -1.91
Cldn4O35054 AC192333.1-201ENSMUST00000224573 376 ntBASIC3.1□□□□□ -1.91
Cldn4O35054 AC155167.3-201ENSMUST00000226349 217 ntBASIC3.1□□□□□ -1.91
Cldn4O35054 AC101945.3-201ENSMUST00000226568 153 ntBASIC3.1□□□□□ -1.91
Cldn4O35054 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Cldn4O35054 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Cldn4O35054 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Cldn4O35054 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Cldn4O35054 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Cldn4O35054 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
Cldn4O35054 Gm20172-201ENSMUST00000193138 1551 ntBASIC3.09□□□□□ -1.91
Cldn4O35054 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Cldn4O35054 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Cldn4O35054 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Cldn4O35054 Gm12782-201ENSMUST00000117519 727 ntBASIC3.09□□□□□ -1.91
Cldn4O35054 Gm3788-201ENSMUST00000119949 136 ntBASIC3.09□□□□□ -1.91
Cldn4O35054 Gm11254-201ENSMUST00000122368 653 ntBASIC3.09□□□□□ -1.91
Cldn4O35054 Gm5958-201ENSMUST00000147698 297 ntBASIC3.09□□□□□ -1.91
Cldn4O35054 Nron-204ENSMUST00000158971 370 ntBASIC3.09□□□□□ -1.91
Cldn4O35054 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC3.09□□□□□ -1.91
Cldn4O35054 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Cldn4O35054 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC3.09□□□□□ -1.91
Cldn4O35054 Gm25198-201ENSMUST00000178574 110 ntBASIC3.09□□□□□ -1.91
Cldn4O35054 Gm26189-201ENSMUST00000179879 107 ntBASIC3.09□□□□□ -1.91
Cldn4O35054 Gm24518-201ENSMUST00000180275 94 ntBASIC3.09□□□□□ -1.91
Cldn4O35054 Mir6951-201ENSMUST00000183910 75 ntBASIC3.09□□□□□ -1.91
Cldn4O35054 Gm32222-201ENSMUST00000203296 298 ntBASIC3.09□□□□□ -1.91
Cldn4O35054 Gm44011-201ENSMUST00000203336 394 ntBASIC3.09□□□□□ -1.91
Cldn4O35054 Gm7039-201ENSMUST00000205138 346 ntBASIC3.09□□□□□ -1.91
Cldn4O35054 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC3.09□□□□□ -1.91
Cldn4O35054 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC3.09□□□□□ -1.91
Cldn4O35054 AC154296.2-201ENSMUST00000214696 545 ntBASIC3.09□□□□□ -1.91
Cldn4O35054 AC168266.1-201ENSMUST00000216024 226 ntBASIC3.09□□□□□ -1.91
Cldn4O35054 AC102369.1-201ENSMUST00000218415 373 ntBASIC3.09□□□□□ -1.91
Cldn4O35054 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC3.09□□□□□ -1.91
Cldn4O35054 AC104832.1-201ENSMUST00000222938 550 ntBASIC3.09□□□□□ -1.91
Cldn4O35054 AC164100.1-201ENSMUST00000227214 508 ntBASIC3.09□□□□□ -1.91
Cldn4O35054 Gm23970-201ENSMUST00000083319 107 ntBASIC3.09□□□□□ -1.91
Cldn4O35054 Gm22154-201ENSMUST00000083844 131 ntBASIC3.09□□□□□ -1.91
Cldn4O35054 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.92
Cldn4O35054 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
Cldn4O35054 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
Cldn4O35054 Gm17969-201ENSMUST00000185706 2557 ntBASIC3.08□□□□□ -1.92
Cldn4O35054 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Cldn4O35054 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Cldn4O35054 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Cldn4O35054 Gm13046-201ENSMUST00000117391 501 ntBASIC3.08□□□□□ -1.92
Cldn4O35054 Gm8217-201ENSMUST00000119136 465 ntBASIC3.08□□□□□ -1.92
Cldn4O35054 Mup-ps22-201ENSMUST00000121611 243 ntBASIC3.08□□□□□ -1.92
Cldn4O35054 Gm14765-201ENSMUST00000121954 326 ntBASIC3.08□□□□□ -1.92
Cldn4O35054 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC3.08□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 143.1 ms