Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Gm27979-201ENSMUST00000185126 56 ntBASIC1.39□□□□□ -2.19
Trav6-6A0A075B603 Gm28755-201ENSMUST00000185773 199 ntBASIC1.39□□□□□ -2.19
Trav6-6A0A075B603 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
Trav6-6A0A075B603 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC1.39□□□□□ -2.19
Trav6-6A0A075B603 Gm37692-201ENSMUST00000192633 232 ntBASIC1.39□□□□□ -2.19
Trav6-6A0A075B603 Gm7871-201ENSMUST00000195346 618 ntBASIC1.39□□□□□ -2.19
Trav6-6A0A075B603 Mir7021-201ENSMUST00000197026 63 ntBASIC1.39□□□□□ -2.19
Trav6-6A0A075B603 Gm45013-201ENSMUST00000206883 178 ntBASIC1.39□□□□□ -2.19
Trav6-6A0A075B603 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
Trav6-6A0A075B603 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC1.39□□□□□ -2.19
Trav6-6A0A075B603 CT010480.1-201ENSMUST00000223612 363 ntBASIC1.39□□□□□ -2.19
Trav6-6A0A075B603 AC192088.2-201ENSMUST00000227590 411 ntBASIC1.39□□□□□ -2.19
Trav6-6A0A075B603 AC183096.2-201ENSMUST00000228733 457 ntBASIC1.39□□□□□ -2.19
Trav6-6A0A075B603 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Trav6-6A0A075B603 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
Trav6-6A0A075B603 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
Trav6-6A0A075B603 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC1.39□□□□□ -2.19
Trav6-6A0A075B603 Gm37761-201ENSMUST00000194989 2098 ntBASIC1.39□□□□□ -2.19
Trav6-6A0A075B603 Gm18300-201ENSMUST00000192792 1406 ntBASIC1.39□□□□□ -2.19
Trav6-6A0A075B603 Gm38255-201ENSMUST00000194910 2996 ntBASIC1.38□□□□□ -2.19
Trav6-6A0A075B603 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
Trav6-6A0A075B603 Gm42536-201ENSMUST00000197562 1613 ntBASIC1.38□□□□□ -2.19
Trav6-6A0A075B603 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Trav6-6A0A075B603 Gm13087-201ENSMUST00000118298 256 ntBASIC1.38□□□□□ -2.19
Trav6-6A0A075B603 Gm12878-201ENSMUST00000118744 332 ntBASIC1.38□□□□□ -2.19
Trav6-6A0A075B603 Gm15497-201ENSMUST00000119137 551 ntBASIC1.38□□□□□ -2.19
Trav6-6A0A075B603 Gm11598-201ENSMUST00000119257 357 ntBASIC1.38□□□□□ -2.19
Trav6-6A0A075B603 Gm15223-201ENSMUST00000120989 826 ntBASIC1.38□□□□□ -2.19
Trav6-6A0A075B603 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC1.38□□□□□ -2.19
Trav6-6A0A075B603 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC1.38□□□□□ -2.19
Trav6-6A0A075B603 Gm22257-201ENSMUST00000158687 301 ntBASIC1.38□□□□□ -2.19
Trav6-6A0A075B603 Gm17119-201ENSMUST00000163943 280 ntBASIC1.38□□□□□ -2.19
Trav6-6A0A075B603 Gm29513-201ENSMUST00000185741 202 ntBASIC1.38□□□□□ -2.19
Trav6-6A0A075B603 Gm42665-201ENSMUST00000202100 586 ntBASIC1.38□□□□□ -2.19
Trav6-6A0A075B603 Gm44533-201ENSMUST00000207782 268 ntBASIC1.38□□□□□ -2.19
Trav6-6A0A075B603 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC1.38□□□□□ -2.19
Trav6-6A0A075B603 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC1.38□□□□□ -2.19
Trav6-6A0A075B603 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Trav6-6A0A075B603 Gm30738-201ENSMUST00000221346 502 ntBASIC1.38□□□□□ -2.19
Trav6-6A0A075B603 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
Trav6-6A0A075B603 n-R5s79-201ENSMUST00000083071 120 ntBASIC1.38□□□□□ -2.19
Trav6-6A0A075B603 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Trav6-6A0A075B603 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
Trav6-6A0A075B603 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
Trav6-6A0A075B603 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
Trav6-6A0A075B603 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
Trav6-6A0A075B603 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
Trav6-6A0A075B603 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
Trav6-6A0A075B603 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
Trav6-6A0A075B603 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC1.37□□□□□ -2.19
Trav6-6A0A075B603 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC1.37□□□□□ -2.19
Trav6-6A0A075B603 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC1.37□□□□□ -2.19
Trav6-6A0A075B603 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC1.37□□□□□ -2.19
Trav6-6A0A075B603 Gm12941-201ENSMUST00000117934 220 ntBASIC1.37□□□□□ -2.19
Trav6-6A0A075B603 Gm7429-201ENSMUST00000118664 348 ntBASIC1.37□□□□□ -2.19
Trav6-6A0A075B603 Gm12105-201ENSMUST00000120846 779 ntBASIC1.37□□□□□ -2.19
Trav6-6A0A075B603 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC1.37□□□□□ -2.19
Trav6-6A0A075B603 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
Trav6-6A0A075B603 Gm15692-201ENSMUST00000152173 352 ntBASIC1.37□□□□□ -2.19
Trav6-6A0A075B603 Gm25637-201ENSMUST00000157529 107 ntBASIC1.37□□□□□ -2.19
Trav6-6A0A075B603 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
Trav6-6A0A075B603 Gm27715-201ENSMUST00000184714 260 ntBASIC1.37□□□□□ -2.19
Trav6-6A0A075B603 Gm20058-201ENSMUST00000186939 284 ntBASIC1.37□□□□□ -2.19
Trav6-6A0A075B603 Igkv1-136-201ENSMUST00000200635 297 ntBASIC1.37□□□□□ -2.19
Trav6-6A0A075B603 Gm34701-202ENSMUST00000204685 360 ntBASIC1.37□□□□□ -2.19
Trav6-6A0A075B603 Gm45754-201ENSMUST00000212380 279 ntBASIC1.37□□□□□ -2.19
Trav6-6A0A075B603 AC155715.1-201ENSMUST00000213575 463 ntBASIC1.37□□□□□ -2.19
Trav6-6A0A075B603 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC1.37□□□□□ -2.19
Trav6-6A0A075B603 CT010455.1-201ENSMUST00000218579 413 ntBASIC1.37□□□□□ -2.19
Trav6-6A0A075B603 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC1.37□□□□□ -2.19
Trav6-6A0A075B603 AC133654.1-201ENSMUST00000228411 672 ntBASIC1.37□□□□□ -2.19
Trav6-6A0A075B603 Gm25130-201ENSMUST00000082650 156 ntBASIC1.37□□□□□ -2.19
Trav6-6A0A075B603 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC1.37□□□□□ -2.19
Trav6-6A0A075B603 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
Trav6-6A0A075B603 Gm42736-201ENSMUST00000200723 1353 ntBASIC1.36□□□□□ -2.19
Trav6-6A0A075B603 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
Trav6-6A0A075B603 Gm25529-201ENSMUST00000104850 92 ntBASIC1.36□□□□□ -2.19
Trav6-6A0A075B603 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
Trav6-6A0A075B603 Gm12607-201ENSMUST00000120724 493 ntBASIC1.36□□□□□ -2.19
Trav6-6A0A075B603 Gm12071-201ENSMUST00000121968 469 ntBASIC1.36□□□□□ -2.19
Trav6-6A0A075B603 Gm16328-201ENSMUST00000126985 196 ntBASIC1.36□□□□□ -2.19
Trav6-6A0A075B603 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC1.36□□□□□ -2.19
Trav6-6A0A075B603 Gm25961-201ENSMUST00000157174 135 ntBASIC1.36□□□□□ -2.19
Trav6-6A0A075B603 U6.1-201ENSMUST00000157443 101 ntBASIC1.36□□□□□ -2.19
Trav6-6A0A075B603 Gm17063-201ENSMUST00000168135 456 ntBASIC1.36□□□□□ -2.19
Trav6-6A0A075B603 Gm17162-201ENSMUST00000168538 473 ntBASIC1.36□□□□□ -2.19
Trav6-6A0A075B603 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC1.36□□□□□ -2.19
Trav6-6A0A075B603 Gm26195-201ENSMUST00000175035 101 ntBASIC1.36□□□□□ -2.19
Trav6-6A0A075B603 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC1.36□□□□□ -2.19
Trav6-6A0A075B603 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
Trav6-6A0A075B603 Gm43286-201ENSMUST00000197420 424 ntBASIC1.36□□□□□ -2.19
Trav6-6A0A075B603 Gm43978-201ENSMUST00000203491 451 ntBASIC1.36□□□□□ -2.19
Trav6-6A0A075B603 Gm44058-201ENSMUST00000204335 467 ntBASIC1.36□□□□□ -2.19
Trav6-6A0A075B603 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC1.36□□□□□ -2.19
Trav6-6A0A075B603 Gm43865-201ENSMUST00000204721 127 ntBASIC1.36□□□□□ -2.19
Trav6-6A0A075B603 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC1.36□□□□□ -2.19
Trav6-6A0A075B603 AC163289.1-201ENSMUST00000215919 262 ntBASIC1.36□□□□□ -2.19
Trav6-6A0A075B603 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC1.36□□□□□ -2.19
Trav6-6A0A075B603 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC1.36□□□□□ -2.19
Trav6-6A0A075B603 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 92.7 ms