Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
Trim47Q8C0E3 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
Trim47Q8C0E3 Gm11251-201ENSMUST00000119593 2800 ntBASIC5□□□□□ -1.61
Trim47Q8C0E3 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
Trim47Q8C0E3 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC5□□□□□ -1.61
Trim47Q8C0E3 Gm26081-201ENSMUST00000104068 132 ntBASIC5□□□□□ -1.61
Trim47Q8C0E3 Gm12568-201ENSMUST00000117362 624 ntBASIC5□□□□□ -1.61
Trim47Q8C0E3 Gm15282-201ENSMUST00000117707 300 ntBASIC5□□□□□ -1.61
Trim47Q8C0E3 Cox20-ps-201ENSMUST00000119872 353 ntBASIC5□□□□□ -1.61
Trim47Q8C0E3 Gm14922-201ENSMUST00000121131 163 ntBASIC5□□□□□ -1.61
Trim47Q8C0E3 Gm22958-201ENSMUST00000122512 184 ntBASIC5□□□□□ -1.61
Trim47Q8C0E3 Gm25290-201ENSMUST00000122796 144 ntBASIC5□□□□□ -1.61
Trim47Q8C0E3 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC5□□□□□ -1.61
Trim47Q8C0E3 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC5□□□□□ -1.61
Trim47Q8C0E3 Gm25913-201ENSMUST00000157617 135 ntBASIC5□□□□□ -1.61
Trim47Q8C0E3 Gm22536-201ENSMUST00000158171 134 ntBASIC5□□□□□ -1.61
Trim47Q8C0E3 Mir1966-201ENSMUST00000158807 108 ntBASIC5□□□□□ -1.61
Trim47Q8C0E3 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Trim47Q8C0E3 Gm23638-201ENSMUST00000175073 126 ntBASIC5□□□□□ -1.61
Trim47Q8C0E3 Gm23158-201ENSMUST00000175076 126 ntBASIC5□□□□□ -1.61
Trim47Q8C0E3 Gm22907-201ENSMUST00000175198 126 ntBASIC5□□□□□ -1.61
Trim47Q8C0E3 Gm22625-201ENSMUST00000175382 126 ntBASIC5□□□□□ -1.61
Trim47Q8C0E3 Gm22875-201ENSMUST00000175449 126 ntBASIC5□□□□□ -1.61
Trim47Q8C0E3 Gm25197-201ENSMUST00000175516 126 ntBASIC5□□□□□ -1.61
Trim47Q8C0E3 Gm27857-201ENSMUST00000176930 126 ntBASIC5□□□□□ -1.61
Trim47Q8C0E3 Gm26268-201ENSMUST00000177685 126 ntBASIC5□□□□□ -1.61
Trim47Q8C0E3 Gm23681-201ENSMUST00000178821 126 ntBASIC5□□□□□ -1.61
Trim47Q8C0E3 Mir6907-201ENSMUST00000183764 71 ntBASIC5□□□□□ -1.61
Trim47Q8C0E3 Gm29574-201ENSMUST00000186226 696 ntBASIC5□□□□□ -1.61
Trim47Q8C0E3 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC5□□□□□ -1.61
Trim47Q8C0E3 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC5□□□□□ -1.61
Trim47Q8C0E3 Gm17951-201ENSMUST00000198536 496 ntBASIC5□□□□□ -1.61
Trim47Q8C0E3 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC5□□□□□ -1.61
Trim47Q8C0E3 AC105958.2-201ENSMUST00000214167 191 ntBASIC5□□□□□ -1.61
Trim47Q8C0E3 Gm18502-201ENSMUST00000218679 199 ntBASIC5□□□□□ -1.61
Trim47Q8C0E3 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Trim47Q8C0E3 Mir146-201ENSMUST00000083667 65 ntBASIC5□□□□□ -1.61
Trim47Q8C0E3 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
Trim47Q8C0E3 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Trim47Q8C0E3 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC5□□□□□ -1.61
Trim47Q8C0E3 Gm36944-201ENSMUST00000192257 2759 ntBASIC5□□□□□ -1.61
Trim47Q8C0E3 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Trim47Q8C0E3 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
Trim47Q8C0E3 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Trim47Q8C0E3 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Trim47Q8C0E3 Gm38106-201ENSMUST00000194107 2534 ntBASIC4.99□□□□□ -1.61
Trim47Q8C0E3 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC4.99□□□□□ -1.61
Trim47Q8C0E3 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC4.99□□□□□ -1.61
Trim47Q8C0E3 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Trim47Q8C0E3 Gm42616-201ENSMUST00000198989 4184 ntBASIC4.99□□□□□ -1.61
Trim47Q8C0E3 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC4.99□□□□□ -1.61
Trim47Q8C0E3 Snord66-201ENSMUST00000104051 75 ntBASIC4.99□□□□□ -1.61
Trim47Q8C0E3 Gm11429-201ENSMUST00000119089 144 ntBASIC4.99□□□□□ -1.61
Trim47Q8C0E3 Gm12640-201ENSMUST00000120097 310 ntBASIC4.99□□□□□ -1.61
Trim47Q8C0E3 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC4.99□□□□□ -1.61
Trim47Q8C0E3 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC4.99□□□□□ -1.61
Trim47Q8C0E3 Gm16404-201ENSMUST00000177739 468 ntBASIC4.99□□□□□ -1.61
Trim47Q8C0E3 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Trim47Q8C0E3 Gm6660-201ENSMUST00000179149 468 ntBASIC4.99□□□□□ -1.61
Trim47Q8C0E3 Gm14598-201ENSMUST00000180109 468 ntBASIC4.99□□□□□ -1.61
Trim47Q8C0E3 Gm14625-201ENSMUST00000180231 468 ntBASIC4.99□□□□□ -1.61
Trim47Q8C0E3 Mir6960-201ENSMUST00000183449 61 ntBASIC4.99□□□□□ -1.61
Trim47Q8C0E3 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Trim47Q8C0E3 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC4.99□□□□□ -1.61
Trim47Q8C0E3 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC4.99□□□□□ -1.61
Trim47Q8C0E3 CT030247.1-201ENSMUST00000216810 267 ntBASIC4.99□□□□□ -1.61
Trim47Q8C0E3 Gm9174-201ENSMUST00000078149 255 ntBASIC4.99□□□□□ -1.61
Trim47Q8C0E3 Gm23302-201ENSMUST00000082710 100 ntBASIC4.99□□□□□ -1.61
Trim47Q8C0E3 Mir384-201ENSMUST00000083565 88 ntBASIC4.99□□□□□ -1.61
Trim47Q8C0E3 Mir99a-201ENSMUST00000083596 65 ntBASIC4.99□□□□□ -1.61
Trim47Q8C0E3 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Trim47Q8C0E3 Gm21940-201ENSMUST00000204940 2278 ntBASIC4.99□□□□□ -1.61
Trim47Q8C0E3 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC4.99□□□□□ -1.61
Trim47Q8C0E3 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Trim47Q8C0E3 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Trim47Q8C0E3 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Trim47Q8C0E3 Gm15304-201ENSMUST00000122150 2640 ntBASIC4.98□□□□□ -1.61
Trim47Q8C0E3 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Trim47Q8C0E3 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Trim47Q8C0E3 Dbpht2-202ENSMUST00000221311 5341 ntBASIC4.98□□□□□ -1.61
Trim47Q8C0E3 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Trim47Q8C0E3 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Trim47Q8C0E3 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Trim47Q8C0E3 Gm24172-201ENSMUST00000104127 117 ntBASIC4.98□□□□□ -1.61
Trim47Q8C0E3 Gm22493-201ENSMUST00000104494 132 ntBASIC4.98□□□□□ -1.61
Trim47Q8C0E3 Gm11334-201ENSMUST00000121969 156 ntBASIC4.98□□□□□ -1.61
Trim47Q8C0E3 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC4.98□□□□□ -1.61
Trim47Q8C0E3 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC4.98□□□□□ -1.61
Trim47Q8C0E3 Gm23121-201ENSMUST00000157653 173 ntBASIC4.98□□□□□ -1.61
Trim47Q8C0E3 Gm24402-201ENSMUST00000157873 91 ntBASIC4.98□□□□□ -1.61
Trim47Q8C0E3 Gm24905-201ENSMUST00000158129 104 ntBASIC4.98□□□□□ -1.61
Trim47Q8C0E3 Gm25494-201ENSMUST00000158143 100 ntBASIC4.98□□□□□ -1.61
Trim47Q8C0E3 Gm24213-201ENSMUST00000158255 258 ntBASIC4.98□□□□□ -1.61
Trim47Q8C0E3 Gm27896-201ENSMUST00000175162 317 ntBASIC4.98□□□□□ -1.61
Trim47Q8C0E3 Gm22395-201ENSMUST00000177427 96 ntBASIC4.98□□□□□ -1.61
Trim47Q8C0E3 Gm27805-201ENSMUST00000184513 79 ntBASIC4.98□□□□□ -1.61
Trim47Q8C0E3 Gm27760-201ENSMUST00000185048 114 ntBASIC4.98□□□□□ -1.61
Trim47Q8C0E3 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC4.98□□□□□ -1.61
Trim47Q8C0E3 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC4.98□□□□□ -1.61
Trim47Q8C0E3 Gm43230-201ENSMUST00000200980 2129 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 101.2 ms