Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 CT010455.1-201ENSMUST00000218579 413 ntBASIC4.34□□□□□ -1.71
Trim28Q62318 Gm9370-201ENSMUST00000222787 609 ntBASIC4.34□□□□□ -1.71
Trim28Q62318 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
Trim28Q62318 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
Trim28Q62318 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Trim28Q62318 CT030170.3-201ENSMUST00000221205 1815 ntBASIC4.34□□□□□ -1.71
Trim28Q62318 Gm7470-201ENSMUST00000194219 2095 ntBASIC4.34□□□□□ -1.71
Trim28Q62318 Gm28634-201ENSMUST00000191087 2613 ntBASIC4.34□□□□□ -1.72
Trim28Q62318 CT010444.1-201ENSMUST00000219963 3845 ntBASIC4.34□□□□□ -1.72
Trim28Q62318 Plek-202ENSMUST00000102881 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Trim28Q62318 Gm36960-201ENSMUST00000195491 2035 ntBASIC4.33□□□□□ -1.72
Trim28Q62318 Gm23175-201ENSMUST00000104371 132 ntBASIC4.33□□□□□ -1.72
Trim28Q62318 Gm13510-201ENSMUST00000118659 429 ntBASIC4.33□□□□□ -1.72
Trim28Q62318 Gm14428-201ENSMUST00000120408 822 ntBASIC4.33□□□□□ -1.72
Trim28Q62318 Gm14875-201ENSMUST00000120881 319 ntBASIC4.33□□□□□ -1.72
Trim28Q62318 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Trim28Q62318 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC4.33□□□□□ -1.72
Trim28Q62318 Gm22037-201ENSMUST00000157280 296 ntBASIC4.33□□□□□ -1.72
Trim28Q62318 Gm23350-201ENSMUST00000158429 103 ntBASIC4.33□□□□□ -1.72
Trim28Q62318 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC4.33□□□□□ -1.72
Trim28Q62318 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Trim28Q62318 Gm27783-201ENSMUST00000183534 105 ntBASIC4.33□□□□□ -1.72
Trim28Q62318 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC4.33□□□□□ -1.72
Trim28Q62318 Gm28506-201ENSMUST00000189937 150 ntBASIC4.33□□□□□ -1.72
Trim28Q62318 Gm32447-201ENSMUST00000194265 697 ntBASIC4.33□□□□□ -1.72
Trim28Q62318 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC4.33□□□□□ -1.72
Trim28Q62318 Gm19726-201ENSMUST00000205008 240 ntBASIC4.33□□□□□ -1.72
Trim28Q62318 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC4.33□□□□□ -1.72
Trim28Q62318 Gm18602-201ENSMUST00000209794 851 ntBASIC4.33□□□□□ -1.72
Trim28Q62318 Gm9318-201ENSMUST00000222444 438 ntBASIC4.33□□□□□ -1.72
Trim28Q62318 Gm46389-201ENSMUST00000223199 392 ntBASIC4.33□□□□□ -1.72
Trim28Q62318 AC173482.4-201ENSMUST00000225096 348 ntBASIC4.33□□□□□ -1.72
Trim28Q62318 AC125311.1-201ENSMUST00000226950 220 ntBASIC4.33□□□□□ -1.72
Trim28Q62318 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Trim28Q62318 Gm24457-201ENSMUST00000083196 105 ntBASIC4.33□□□□□ -1.72
Trim28Q62318 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Trim28Q62318 Gm43047-201ENSMUST00000200089 3460 ntBASIC4.33□□□□□ -1.72
Trim28Q62318 Olfr933-202ENSMUST00000216238 4475 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
Trim28Q62318 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Trim28Q62318 Gm44679-201ENSMUST00000207202 2908 ntBASIC4.32□□□□□ -1.72
Trim28Q62318 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Trim28Q62318 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Trim28Q62318 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
Trim28Q62318 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Trim28Q62318 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Trim28Q62318 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC4.32□□□□□ -1.72
Trim28Q62318 Gm12568-201ENSMUST00000117362 624 ntBASIC4.32□□□□□ -1.72
Trim28Q62318 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC4.32□□□□□ -1.72
Trim28Q62318 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC4.32□□□□□ -1.72
Trim28Q62318 Gm13518-201ENSMUST00000120018 233 ntBASIC4.32□□□□□ -1.72
Trim28Q62318 Gm12872-201ENSMUST00000121835 320 ntBASIC4.32□□□□□ -1.72
Trim28Q62318 Gm12858-201ENSMUST00000121913 208 ntBASIC4.32□□□□□ -1.72
Trim28Q62318 Gm23258-201ENSMUST00000158319 106 ntBASIC4.32□□□□□ -1.72
Trim28Q62318 Gm23702-201ENSMUST00000158840 130 ntBASIC4.32□□□□□ -1.72
Trim28Q62318 Gm10075-201ENSMUST00000162030 545 ntBASIC4.32□□□□□ -1.72
Trim28Q62318 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC4.32□□□□□ -1.72
Trim28Q62318 Gm27028-201ENSMUST00000182303 399 ntBASIC4.32□□□□□ -1.72
Trim28Q62318 Gm29062-201ENSMUST00000186032 694 ntBASIC4.32□□□□□ -1.72
Trim28Q62318 Gm28255-201ENSMUST00000187101 694 ntBASIC4.32□□□□□ -1.72
Trim28Q62318 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC4.32□□□□□ -1.72
Trim28Q62318 Igkv9-128-201ENSMUST00000196602 353 ntBASIC4.32□□□□□ -1.72
Trim28Q62318 Gm45365-201ENSMUST00000209489 256 ntBASIC4.32□□□□□ -1.72
Trim28Q62318 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC4.32□□□□□ -1.72
Trim28Q62318 Gm45513-201ENSMUST00000210228 376 ntBASIC4.32□□□□□ -1.72
Trim28Q62318 Gm45860-201ENSMUST00000212700 334 ntBASIC4.32□□□□□ -1.72
Trim28Q62318 AC158803.1-201ENSMUST00000219495 316 ntBASIC4.32□□□□□ -1.72
Trim28Q62318 Gm7540-201ENSMUST00000219764 926 ntBASIC4.32□□□□□ -1.72
Trim28Q62318 AC122924.2-201ENSMUST00000220799 298 ntBASIC4.32□□□□□ -1.72
Trim28Q62318 Gm10088-201ENSMUST00000074116 423 ntBASIC4.32□□□□□ -1.72
Trim28Q62318 Gm23939-201ENSMUST00000082880 133 ntBASIC4.32□□□□□ -1.72
Trim28Q62318 Rny1-201ENSMUST00000083767 112 ntBASIC4.32□□□□□ -1.72
Trim28Q62318 Gm16261-201ENSMUST00000096813 205 ntBASIC4.32□□□□□ -1.72
Trim28Q62318 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC4.31□□□□□ -1.72
Trim28Q62318 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Trim28Q62318 Gm8995-201ENSMUST00000184842 7280 ntBASIC4.31□□□□□ -1.72
Trim28Q62318 Fsd1l-203ENSMUST00000132151 7467 ntAPPRIS P2 TSL 5 BASIC4.31□□□□□ -1.72
Trim28Q62318 Mir208b-201ENSMUST00000104735 77 ntBASIC4.31□□□□□ -1.72
Trim28Q62318 Gm6797-201ENSMUST00000119440 512 ntBASIC4.31□□□□□ -1.72
Trim28Q62318 Gm14765-201ENSMUST00000121954 326 ntBASIC4.31□□□□□ -1.72
Trim28Q62318 Gm15147-201ENSMUST00000122263 483 ntBASIC4.31□□□□□ -1.72
Trim28Q62318 n-R5s32-201ENSMUST00000122495 103 ntBASIC4.31□□□□□ -1.72
Trim28Q62318 n-R5s87-201ENSMUST00000122752 116 ntBASIC4.31□□□□□ -1.72
Trim28Q62318 Gm6956-201ENSMUST00000134724 546 ntBASIC4.31□□□□□ -1.72
Trim28Q62318 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Trim28Q62318 Gm23538-201ENSMUST00000157535 101 ntBASIC4.31□□□□□ -1.72
Trim28Q62318 Gm25718-201ENSMUST00000158632 118 ntBASIC4.31□□□□□ -1.72
Trim28Q62318 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Trim28Q62318 Gm21842-201ENSMUST00000177552 498 ntBASIC4.31□□□□□ -1.72
Trim28Q62318 Gm21626-201ENSMUST00000177791 498 ntBASIC4.31□□□□□ -1.72
Trim28Q62318 Gm21562-201ENSMUST00000177888 498 ntBASIC4.31□□□□□ -1.72
Trim28Q62318 Gm21539-201ENSMUST00000177925 498 ntBASIC4.31□□□□□ -1.72
Trim28Q62318 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Trim28Q62318 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Trim28Q62318 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Trim28Q62318 Gm17522-201ENSMUST00000178144 498 ntBASIC4.31□□□□□ -1.72
Trim28Q62318 Gm21599-201ENSMUST00000178249 498 ntBASIC4.31□□□□□ -1.72
Trim28Q62318 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Trim28Q62318 Gm21914-201ENSMUST00000178452 498 ntBASIC4.31□□□□□ -1.72
Trim28Q62318 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Trim28Q62318 Gm21723-201ENSMUST00000178692 498 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 385.1 ms