Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm24443-201ENSMUST00000157242 132 ntBASIC1.89□□□□□ -2.11
Trav3-3Q5R1C3 Gm24716-201ENSMUST00000157524 104 ntBASIC1.89□□□□□ -2.11
Trav3-3Q5R1C3 Gm25977-201ENSMUST00000158697 85 ntBASIC1.89□□□□□ -2.11
Trav3-3Q5R1C3 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC1.89□□□□□ -2.11
Trav3-3Q5R1C3 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
Trav3-3Q5R1C3 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC1.89□□□□□ -2.11
Trav3-3Q5R1C3 Gm4076-201ENSMUST00000179230 965 ntBASIC1.89□□□□□ -2.11
Trav3-3Q5R1C3 Mir6382-201ENSMUST00000184055 110 ntBASIC1.89□□□□□ -2.11
Trav3-3Q5R1C3 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC1.89□□□□□ -2.11
Trav3-3Q5R1C3 Gm28956-201ENSMUST00000189047 427 ntBASIC1.89□□□□□ -2.11
Trav3-3Q5R1C3 Gm36966-201ENSMUST00000192217 413 ntBASIC1.89□□□□□ -2.11
Trav3-3Q5R1C3 Gm37029-201ENSMUST00000195773 239 ntBASIC1.89□□□□□ -2.11
Trav3-3Q5R1C3 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC1.89□□□□□ -2.11
Trav3-3Q5R1C3 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC1.89□□□□□ -2.11
Trav3-3Q5R1C3 Gm18691-201ENSMUST00000203593 872 ntBASIC1.89□□□□□ -2.11
Trav3-3Q5R1C3 Gm44254-201ENSMUST00000204184 322 ntBASIC1.89□□□□□ -2.11
Trav3-3Q5R1C3 Gm44594-201ENSMUST00000208982 407 ntBASIC1.89□□□□□ -2.11
Trav3-3Q5R1C3 Gm45791-201ENSMUST00000212908 352 ntBASIC1.89□□□□□ -2.11
Trav3-3Q5R1C3 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC1.89□□□□□ -2.11
Trav3-3Q5R1C3 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC1.89□□□□□ -2.11
Trav3-3Q5R1C3 Gm46146-201ENSMUST00000217483 346 ntBASIC1.89□□□□□ -2.11
Trav3-3Q5R1C3 AC142499.1-201ENSMUST00000220036 374 ntBASIC1.89□□□□□ -2.11
Trav3-3Q5R1C3 AC125223.1-203ENSMUST00000225304 498 ntBASIC1.89□□□□□ -2.11
Trav3-3Q5R1C3 CT025525.2-201ENSMUST00000227743 423 ntBASIC1.89□□□□□ -2.11
Trav3-3Q5R1C3 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
Trav3-3Q5R1C3 Gm9762-201ENSMUST00000036976 444 ntBASIC1.89□□□□□ -2.11
Trav3-3Q5R1C3 Mir125b-2-201ENSMUST00000083538 71 ntBASIC1.89□□□□□ -2.11
Trav3-3Q5R1C3 Gm22353-201ENSMUST00000083918 136 ntBASIC1.89□□□□□ -2.11
Trav3-3Q5R1C3 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC1.89□□□□□ -2.11
Trav3-3Q5R1C3 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC1.89□□□□□ -2.11
Trav3-3Q5R1C3 Gm28359-201ENSMUST00000187470 1322 ntBASIC1.89□□□□□ -2.11
Trav3-3Q5R1C3 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Trav3-3Q5R1C3 Gm25308-201ENSMUST00000104171 158 ntBASIC1.88□□□□□ -2.11
Trav3-3Q5R1C3 Gm15110-201ENSMUST00000117545 881 ntBASIC1.88□□□□□ -2.11
Trav3-3Q5R1C3 Gm15094-201ENSMUST00000118394 1131 ntBASIC1.88□□□□□ -2.11
Trav3-3Q5R1C3 Gm13502-201ENSMUST00000121574 684 ntBASIC1.88□□□□□ -2.11
Trav3-3Q5R1C3 Gm23600-201ENSMUST00000157260 71 ntBASIC1.88□□□□□ -2.11
Trav3-3Q5R1C3 Mir5101-201ENSMUST00000175181 83 ntBASIC1.88□□□□□ -2.11
Trav3-3Q5R1C3 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC1.88□□□□□ -2.11
Trav3-3Q5R1C3 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC1.88□□□□□ -2.11
Trav3-3Q5R1C3 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC1.88□□□□□ -2.11
Trav3-3Q5R1C3 Gm37455-201ENSMUST00000191993 529 ntBASIC1.88□□□□□ -2.11
Trav3-3Q5R1C3 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Trav3-3Q5R1C3 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC1.88□□□□□ -2.11
Trav3-3Q5R1C3 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC1.88□□□□□ -2.11
Trav3-3Q5R1C3 Gm44961-201ENSMUST00000207450 196 ntBASIC1.88□□□□□ -2.11
Trav3-3Q5R1C3 Gm45387-201ENSMUST00000209792 632 ntBASIC1.88□□□□□ -2.11
Trav3-3Q5R1C3 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC1.88□□□□□ -2.11
Trav3-3Q5R1C3 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Trav3-3Q5R1C3 Gm8940-201ENSMUST00000212585 219 ntBASIC1.88□□□□□ -2.11
Trav3-3Q5R1C3 AC167721.1-201ENSMUST00000217088 279 ntBASIC1.88□□□□□ -2.11
Trav3-3Q5R1C3 AC153529.1-201ENSMUST00000217818 370 ntBASIC1.88□□□□□ -2.11
Trav3-3Q5R1C3 AC192334.2-201ENSMUST00000223087 1091 ntBASIC1.88□□□□□ -2.11
Trav3-3Q5R1C3 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC1.88□□□□□ -2.11
Trav3-3Q5R1C3 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Trav3-3Q5R1C3 Mir19a-201ENSMUST00000083482 82 ntBASIC1.88□□□□□ -2.11
Trav3-3Q5R1C3 Mir30d-201ENSMUST00000083503 82 ntBASIC1.88□□□□□ -2.11
Trav3-3Q5R1C3 Gm22154-201ENSMUST00000083844 131 ntBASIC1.88□□□□□ -2.11
Trav3-3Q5R1C3 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
Trav3-3Q5R1C3 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Trav3-3Q5R1C3 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
Trav3-3Q5R1C3 CT025538.3-201ENSMUST00000225279 3848 ntBASIC1.88□□□□□ -2.11
Trav3-3Q5R1C3 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
Trav3-3Q5R1C3 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC1.88□□□□□ -2.11
Trav3-3Q5R1C3 AC169038.1-201ENSMUST00000227378 1352 ntBASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 CT009504.1-201ENSMUST00000218252 3330 ntBASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Gm26002-201ENSMUST00000101915 107 ntBASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Gm14894-201ENSMUST00000117170 270 ntBASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Gm13880-201ENSMUST00000118421 474 ntBASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Gm12878-201ENSMUST00000118744 332 ntBASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Gm11321-201ENSMUST00000121257 902 ntBASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Gm23469-201ENSMUST00000157131 104 ntBASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Gm26411-201ENSMUST00000157668 107 ntBASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Gm25557-201ENSMUST00000158084 315 ntBASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Gm3221-201ENSMUST00000164869 440 ntBASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Gm17377-201ENSMUST00000165184 207 ntBASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Gm23268-201ENSMUST00000175494 78 ntBASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Gm20794-201ENSMUST00000177626 628 ntBASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Gm21744-201ENSMUST00000178403 662 ntBASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Gm25156-201ENSMUST00000179809 79 ntBASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Gm21171-201ENSMUST00000180048 673 ntBASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC1.87□□□□□ -2.11
Trav3-3Q5R1C3 Mir7667-201ENSMUST00000183866 63 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 91.2 ms