| Hoxa9 | P09631 | Zfp965-204 | ENSMUST00000143490 | 297 nt | TSL 5 BASIC | 2.43 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm13976-201 | ENSMUST00000154367 | 479 nt | TSL 3 BASIC | 2.43 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm26186-201 | ENSMUST00000157689 | 125 nt | BASIC | 2.43 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm15562-201 | ENSMUST00000161397 | 426 nt | TSL 1 (best) BASIC | 2.43 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm17377-201 | ENSMUST00000165184 | 207 nt | BASIC | 2.43 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Cep41-210 | ENSMUST00000169422 | 438 nt | TSL 3 BASIC | 2.43 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm20415-201 | ENSMUST00000172877 | 423 nt | BASIC | 2.43 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Vmn1r-ps85-201 | ENSMUST00000173029 | 890 nt | BASIC | 2.43 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm25874-201 | ENSMUST00000178030 | 79 nt | BASIC | 2.43 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm27676-201 | ENSMUST00000183669 | 61 nt | BASIC | 2.43 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm28560-201 | ENSMUST00000186091 | 315 nt | BASIC | 2.43 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm28334-201 | ENSMUST00000186653 | 315 nt | BASIC | 2.43 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm28495-201 | ENSMUST00000188452 | 315 nt | BASIC | 2.43 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm28232-201 | ENSMUST00000188683 | 315 nt | BASIC | 2.43 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm28481-201 | ENSMUST00000189231 | 315 nt | BASIC | 2.43 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm28779-201 | ENSMUST00000189678 | 323 nt | BASIC | 2.43 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | 1700063A18Rik-201 | ENSMUST00000190901 | 356 nt | TSL 1 (best) BASIC | 2.43 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm29059-201 | ENSMUST00000191534 | 315 nt | BASIC | 2.43 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm37765-201 | ENSMUST00000192395 | 315 nt | BASIC | 2.43 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm37237-201 | ENSMUST00000192893 | 315 nt | BASIC | 2.43 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm36968-201 | ENSMUST00000193737 | 315 nt | BASIC | 2.43 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm38290-201 | ENSMUST00000195238 | 315 nt | BASIC | 2.43 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm43626-201 | ENSMUST00000198575 | 162 nt | BASIC | 2.43 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Igkv11-114-201 | ENSMUST00000200013 | 346 nt | BASIC | 2.43 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm2511-201 | ENSMUST00000205521 | 457 nt | TSL 3 BASIC | 2.43 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm45288-201 | ENSMUST00000210236 | 151 nt | BASIC | 2.43 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm45439-201 | ENSMUST00000211723 | 359 nt | BASIC | 2.43 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Prl2c5-201 | ENSMUST00000021778 | 844 nt | APPRIS P3 TSL 1 (best) BASIC | 2.43 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | AC093316.1-201 | ENSMUST00000218793 | 529 nt | TSL 5 BASIC | 2.43 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm4921-201 | ENSMUST00000219804 | 992 nt | BASIC | 2.43 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm34662-201 | ENSMUST00000220502 | 215 nt | TSL 3 BASIC | 2.43 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | AC122393.3-201 | ENSMUST00000226343 | 1059 nt | BASIC | 2.43 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm23516-201 | ENSMUST00000093728 | 107 nt | BASIC | 2.43 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm45844-205 | ENSMUST00000210333 | 3861 nt | APPRIS P5 TSL 1 (best) BASIC | 2.43 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Olfr218-202 | ENSMUST00000215844 | 3410 nt | APPRIS P1 TSL 5 BASIC | 2.43 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm12022-201 | ENSMUST00000143311 | 1340 nt | TSL 1 (best) BASIC | 2.42 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | 1700017N19Rik-207 | ENSMUST00000190708 | 1945 nt | APPRIS P1 TSL 5 BASIC | 2.42 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Olfr1457-204 | ENSMUST00000215229 | 2538 nt | APPRIS P1 TSL 5 BASIC | 2.42 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Snhg14-213 | ENSMUST00000190666 | 3708 nt | TSL 1 (best) BASIC | 2.42 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Defb43-201 | ENSMUST00000100491 | 408 nt | APPRIS P1 TSL 1 (best) BASIC | 2.42 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm14399-202 | ENSMUST00000108929 | 813 nt | TSL 5 BASIC | 2.42 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm13454-201 | ENSMUST00000118166 | 483 nt | BASIC | 2.42 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm11219-201 | ENSMUST00000118565 | 358 nt | BASIC | 2.42 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm12878-201 | ENSMUST00000118744 | 332 nt | BASIC | 2.42 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Rpl30-ps11-201 | ENSMUST00000119630 | 345 nt | BASIC | 2.42 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm12510-201 | ENSMUST00000152190 | 362 nt | TSL 5 BASIC | 2.42 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm23980-201 | ENSMUST00000157135 | 158 nt | BASIC | 2.42 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm23223-201 | ENSMUST00000158119 | 127 nt | BASIC | 2.42 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm8292-201 | ENSMUST00000162574 | 396 nt | BASIC | 2.42 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm2855-201 | ENSMUST00000166765 | 456 nt | BASIC | 2.42 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm1553-201 | ENSMUST00000177934 | 658 nt | APPRIS P1 TSL 1 (best) BASIC | 2.42 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Cldn34c3-201 | ENSMUST00000178148 | 702 nt | APPRIS P1 TSL 5 BASIC | 2.42 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Hmga1b-202 | ENSMUST00000178955 | 120 nt | BASIC | 2.42 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm27007-201 | ENSMUST00000183264 | 279 nt | TSL 3 BASIC | 2.42 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm18448-201 | ENSMUST00000186286 | 599 nt | BASIC | 2.42 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm28585-201 | ENSMUST00000187587 | 442 nt | TSL 5 BASIC | 2.42 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm6135-201 | ENSMUST00000198726 | 372 nt | TSL 2 BASIC | 2.42 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm43600-201 | ENSMUST00000202134 | 223 nt | BASIC | 2.42 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | 4930595L18Rik-201 | ENSMUST00000204069 | 506 nt | TSL 1 (best) BASIC | 2.42 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm35548-201 | ENSMUST00000214348 | 441 nt | TSL 5 BASIC | 2.42 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm31849-201 | ENSMUST00000220306 | 375 nt | BASIC | 2.42 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | AC130823.2-201 | ENSMUST00000226169 | 290 nt | BASIC | 2.42 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Olfr1461-201 | ENSMUST00000053772 | 939 nt | APPRIS P1 BASIC | 2.42 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Ear2-201 | ENSMUST00000074839 | 719 nt | APPRIS P1 TSL 1 (best) BASIC | 2.42 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm23448-201 | ENSMUST00000083151 | 104 nt | BASIC | 2.42 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | n-R5s197-201 | ENSMUST00000083302 | 119 nt | BASIC | 2.42 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Mir16-2-201 | ENSMUST00000083672 | 95 nt | BASIC | 2.42 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm10337-201 | ENSMUST00000096145 | 165 nt | APPRIS P1 BASIC | 2.42 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm17916-201 | ENSMUST00000186137 | 1342 nt | TSL 1 (best) BASIC | 2.42 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm12584-201 | ENSMUST00000117109 | 1105 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm2768-201 | ENSMUST00000121062 | 250 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm13424-201 | ENSMUST00000122301 | 354 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm25321-201 | ENSMUST00000122558 | 102 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Serf1-202 | ENSMUST00000129014 | 543 nt | APPRIS P1 TSL 3 BASIC | 2.41 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm23588-201 | ENSMUST00000157659 | 99 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm16584-201 | ENSMUST00000159267 | 189 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm17538-201 | ENSMUST00000168236 | 327 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Vmn2r-ps84-201 | ENSMUST00000173377 | 897 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm25873-201 | ENSMUST00000180317 | 107 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm27399-201 | ENSMUST00000184250 | 78 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm28449-201 | ENSMUST00000187655 | 506 nt | TSL 3 BASIC | 2.41 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm37946-201 | ENSMUST00000192064 | 347 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm44477-201 | ENSMUST00000199661 | 110 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm42857-201 | ENSMUST00000200823 | 339 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm44254-201 | ENSMUST00000204184 | 322 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm45368-201 | ENSMUST00000209323 | 703 nt | TSL 5 BASIC | 2.41 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm45395-201 | ENSMUST00000209891 | 559 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm45488-201 | ENSMUST00000210747 | 371 nt | TSL 3 BASIC | 2.41 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | AC157570.3-201 | ENSMUST00000219281 | 205 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | AC132384.11-201 | ENSMUST00000219676 | 178 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | AC127578.1-201 | ENSMUST00000227289 | 93 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | AC131029.2-202 | ENSMUST00000228430 | 496 nt | BASIC | 2.41 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Olfr395-201 | ENSMUST00000072991 | 939 nt | APPRIS P1 BASIC | 2.41 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Olfr1309-205 | ENSMUST00000216948 | 5168 nt | APPRIS P1 TSL 5 BASIC | 2.41 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Cyp3a41b-201 | ENSMUST00000075837 | 2064 nt | APPRIS P1 TSL 1 (best) BASIC | 2.4 | □□□□□ -2.02 | | |
| Hoxa9 | P09631 | Gm26154-201 | ENSMUST00000102339 | 96 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| Hoxa9 | P09631 | Gm25213-201 | ENSMUST00000102388 | 113 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| Hoxa9 | P09631 | Mir883a-201 | ENSMUST00000104824 | 76 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| Hoxa9 | P09631 | Gm14588-201 | ENSMUST00000119895 | 172 nt | BASIC | 2.4 | □□□□□ -2.03 | | |
| Hoxa9 | P09631 | Slc7a12-202 | ENSMUST00000120484 | 1010 nt | TSL 5 BASIC | 2.4 | □□□□□ -2.03 | | |