Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm29428-201ENSMUST00000190086 409 ntBASIC4.67□□□□□ -1.66
Clp1Q99LI9 Gm42990-201ENSMUST00000199231 312 ntBASIC4.67□□□□□ -1.66
Clp1Q99LI9 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Clp1Q99LI9 Gm44010-201ENSMUST00000204432 331 ntBASIC4.67□□□□□ -1.66
Clp1Q99LI9 Gm44032-201ENSMUST00000204841 166 ntBASIC4.67□□□□□ -1.66
Clp1Q99LI9 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC4.67□□□□□ -1.66
Clp1Q99LI9 Gm20734-201ENSMUST00000216939 193 ntBASIC4.67□□□□□ -1.66
Clp1Q99LI9 AC139294.1-201ENSMUST00000226708 571 ntBASIC4.67□□□□□ -1.66
Clp1Q99LI9 Gm22997-201ENSMUST00000082845 107 ntBASIC4.67□□□□□ -1.66
Clp1Q99LI9 Gm24948-201ENSMUST00000082866 207 ntBASIC4.67□□□□□ -1.66
Clp1Q99LI9 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Clp1Q99LI9 AC149588.1-201ENSMUST00000228274 3745 ntBASIC4.67□□□□□ -1.66
Clp1Q99LI9 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
Clp1Q99LI9 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Clp1Q99LI9 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Clp1Q99LI9 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC4.67□□□□□ -1.66
Clp1Q99LI9 Gm36960-201ENSMUST00000195491 2035 ntBASIC4.67□□□□□ -1.66
Clp1Q99LI9 Gm42548-201ENSMUST00000202669 3933 ntBASIC4.66□□□□□ -1.66
Clp1Q99LI9 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Clp1Q99LI9 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Clp1Q99LI9 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Clp1Q99LI9 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Clp1Q99LI9 Gm15896-201ENSMUST00000118045 440 ntBASIC4.66□□□□□ -1.66
Clp1Q99LI9 Gm14877-201ENSMUST00000119803 478 ntBASIC4.66□□□□□ -1.66
Clp1Q99LI9 Gm11819-201ENSMUST00000122192 372 ntBASIC4.66□□□□□ -1.66
Clp1Q99LI9 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Clp1Q99LI9 Gm24914-201ENSMUST00000157285 313 ntBASIC4.66□□□□□ -1.66
Clp1Q99LI9 Gm23232-201ENSMUST00000157300 105 ntBASIC4.66□□□□□ -1.66
Clp1Q99LI9 Ang-ps2-201ENSMUST00000178173 433 ntBASIC4.66□□□□□ -1.66
Clp1Q99LI9 Gm8296-201ENSMUST00000185597 524 ntBASIC4.66□□□□□ -1.66
Clp1Q99LI9 Igkv2-113-201ENSMUST00000196138 362 ntBASIC4.66□□□□□ -1.66
Clp1Q99LI9 Gm23625-201ENSMUST00000082457 100 ntBASIC4.66□□□□□ -1.66
Clp1Q99LI9 Mir99a-201ENSMUST00000083596 65 ntBASIC4.66□□□□□ -1.66
Clp1Q99LI9 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Clp1Q99LI9 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
Clp1Q99LI9 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Clp1Q99LI9 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Clp1Q99LI9 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Clp1Q99LI9 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC4.66□□□□□ -1.66
Clp1Q99LI9 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Clp1Q99LI9 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC4.66□□□□□ -1.66
Clp1Q99LI9 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Clp1Q99LI9 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Clp1Q99LI9 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC4.65□□□□□ -1.66
Clp1Q99LI9 Gm42946-201ENSMUST00000196108 2570 ntBASIC4.65□□□□□ -1.66
Clp1Q99LI9 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
Clp1Q99LI9 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Clp1Q99LI9 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Clp1Q99LI9 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Clp1Q99LI9 Gm24683-201ENSMUST00000104840 88 ntBASIC4.65□□□□□ -1.67
Clp1Q99LI9 Gm15936-201ENSMUST00000118706 460 ntBASIC4.65□□□□□ -1.67
Clp1Q99LI9 Gm25104-201ENSMUST00000122476 163 ntBASIC4.65□□□□□ -1.67
Clp1Q99LI9 Gm25908-201ENSMUST00000157624 98 ntBASIC4.65□□□□□ -1.67
Clp1Q99LI9 Gm23586-201ENSMUST00000157657 123 ntBASIC4.65□□□□□ -1.67
Clp1Q99LI9 Gm25333-201ENSMUST00000158035 246 ntBASIC4.65□□□□□ -1.67
Clp1Q99LI9 Gm8292-201ENSMUST00000162574 396 ntBASIC4.65□□□□□ -1.67
Clp1Q99LI9 Gm24084-201ENSMUST00000175173 137 ntBASIC4.65□□□□□ -1.67
Clp1Q99LI9 Gm27520-201ENSMUST00000184872 81 ntBASIC4.65□□□□□ -1.67
Clp1Q99LI9 Gm37763-201ENSMUST00000193445 120 ntBASIC4.65□□□□□ -1.67
Clp1Q99LI9 Gm43250-201ENSMUST00000196536 273 ntBASIC4.65□□□□□ -1.67
Clp1Q99LI9 Mir3535-201ENSMUST00000197651 147 ntBASIC4.65□□□□□ -1.67
Clp1Q99LI9 Gm18982-201ENSMUST00000198118 529 ntBASIC4.65□□□□□ -1.67
Clp1Q99LI9 Gm45879-201ENSMUST00000212521 392 ntBASIC4.65□□□□□ -1.67
Clp1Q99LI9 AC124562.1-201ENSMUST00000224673 337 ntBASIC4.65□□□□□ -1.67
Clp1Q99LI9 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
Clp1Q99LI9 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
Clp1Q99LI9 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Clp1Q99LI9 Gm15262-202ENSMUST00000207320 5010 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Clp1Q99LI9 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
Clp1Q99LI9 Gm37941-201ENSMUST00000192170 2309 ntBASIC4.64□□□□□ -1.67
Clp1Q99LI9 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Clp1Q99LI9 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Clp1Q99LI9 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Clp1Q99LI9 Gm37236-201ENSMUST00000193670 3249 ntBASIC4.64□□□□□ -1.67
Clp1Q99LI9 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Clp1Q99LI9 Gm24788-201ENSMUST00000104283 156 ntBASIC4.64□□□□□ -1.67
Clp1Q99LI9 Gm23988-201ENSMUST00000117034 122 ntBASIC4.64□□□□□ -1.67
Clp1Q99LI9 Gm13155-201ENSMUST00000119277 646 ntBASIC4.64□□□□□ -1.67
Clp1Q99LI9 Gm8178-201ENSMUST00000121570 646 ntBASIC4.64□□□□□ -1.67
Clp1Q99LI9 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC4.64□□□□□ -1.67
Clp1Q99LI9 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Clp1Q99LI9 Gm22036-201ENSMUST00000157279 215 ntBASIC4.64□□□□□ -1.67
Clp1Q99LI9 Gm26347-201ENSMUST00000157526 131 ntBASIC4.64□□□□□ -1.67
Clp1Q99LI9 Gm20450-201ENSMUST00000173652 147 ntBASIC4.64□□□□□ -1.67
Clp1Q99LI9 Gm25749-201ENSMUST00000175485 111 ntBASIC4.64□□□□□ -1.67
Clp1Q99LI9 Gm20630-201ENSMUST00000177387 551 ntBASIC4.64□□□□□ -1.67
Clp1Q99LI9 Gm27718-201ENSMUST00000183721 86 ntBASIC4.64□□□□□ -1.67
Clp1Q99LI9 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Clp1Q99LI9 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC4.64□□□□□ -1.67
Clp1Q99LI9 Gm29262-201ENSMUST00000190084 196 ntBASIC4.64□□□□□ -1.67
Clp1Q99LI9 Gm45539-201ENSMUST00000210313 428 ntBASIC4.64□□□□□ -1.67
Clp1Q99LI9 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC4.64□□□□□ -1.67
Clp1Q99LI9 Gm9818-201ENSMUST00000050900 255 ntBASIC4.64□□□□□ -1.67
Clp1Q99LI9 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Clp1Q99LI9 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
Clp1Q99LI9 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC4.64□□□□□ -1.67
Clp1Q99LI9 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
Clp1Q99LI9 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC4.63□□□□□ -1.67
Clp1Q99LI9 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC4.63□□□□□ -1.67
Clp1Q99LI9 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC4.63□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms