Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Gm43009-201ENSMUST00000199979 3566 ntBASIC3.91□□□□□ -1.78
Ndc1Q8VCB1 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
Ndc1Q8VCB1 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC3.91□□□□□ -1.78
Ndc1Q8VCB1 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Ndc1Q8VCB1 AC091683.1-201ENSMUST00000222307 2446 ntBASIC3.91□□□□□ -1.78
Ndc1Q8VCB1 Gm37848-201ENSMUST00000195288 3103 ntBASIC3.9□□□□□ -1.78
Ndc1Q8VCB1 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Ndc1Q8VCB1 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC3.9□□□□□ -1.78
Ndc1Q8VCB1 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Ndc1Q8VCB1 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Ndc1Q8VCB1 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
Ndc1Q8VCB1 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC3.9□□□□□ -1.79
Ndc1Q8VCB1 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Ndc1Q8VCB1 Gm23319-201ENSMUST00000104467 131 ntBASIC3.9□□□□□ -1.79
Ndc1Q8VCB1 Gm24503-201ENSMUST00000158454 135 ntBASIC3.9□□□□□ -1.79
Ndc1Q8VCB1 Nron-204ENSMUST00000158971 370 ntBASIC3.9□□□□□ -1.79
Ndc1Q8VCB1 Gm26983-201ENSMUST00000182051 388 ntBASIC3.9□□□□□ -1.79
Ndc1Q8VCB1 Mir6907-201ENSMUST00000183764 71 ntBASIC3.9□□□□□ -1.79
Ndc1Q8VCB1 Gm27997-201ENSMUST00000184942 69 ntBASIC3.9□□□□□ -1.79
Ndc1Q8VCB1 Mir6418-201ENSMUST00000185075 115 ntBASIC3.9□□□□□ -1.79
Ndc1Q8VCB1 Gm29429-201ENSMUST00000187071 121 ntBASIC3.9□□□□□ -1.79
Ndc1Q8VCB1 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC3.9□□□□□ -1.79
Ndc1Q8VCB1 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC3.9□□□□□ -1.79
Ndc1Q8VCB1 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC3.9□□□□□ -1.79
Ndc1Q8VCB1 Gm46997-201ENSMUST00000222108 217 ntBASIC3.9□□□□□ -1.79
Ndc1Q8VCB1 AC183096.1-201ENSMUST00000226392 130 ntBASIC3.9□□□□□ -1.79
Ndc1Q8VCB1 mt-Ti-201ENSMUST00000082393 69 ntBASIC3.9□□□□□ -1.79
Ndc1Q8VCB1 Gm24316-201ENSMUST00000083041 107 ntBASIC3.9□□□□□ -1.79
Ndc1Q8VCB1 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
Ndc1Q8VCB1 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Ndc1Q8VCB1 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Ndc1Q8VCB1 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Ndc1Q8VCB1 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Ndc1Q8VCB1 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Ndc1Q8VCB1 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Ndc1Q8VCB1 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Ndc1Q8VCB1 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Ndc1Q8VCB1 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Ndc1Q8VCB1 Gm45804-201ENSMUST00000212137 3435 ntBASIC3.89□□□□□ -1.79
Ndc1Q8VCB1 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Ndc1Q8VCB1 Gm13329-201ENSMUST00000117063 265 ntBASIC3.89□□□□□ -1.79
Ndc1Q8VCB1 Gm15783-201ENSMUST00000117521 633 ntBASIC3.89□□□□□ -1.79
Ndc1Q8VCB1 Gm11456-201ENSMUST00000121070 256 ntBASIC3.89□□□□□ -1.79
Ndc1Q8VCB1 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Ndc1Q8VCB1 Gm22561-201ENSMUST00000157331 84 ntBASIC3.89□□□□□ -1.79
Ndc1Q8VCB1 Gm24745-201ENSMUST00000157840 85 ntBASIC3.89□□□□□ -1.79
Ndc1Q8VCB1 Gm24961-201ENSMUST00000157918 184 ntBASIC3.89□□□□□ -1.79
Ndc1Q8VCB1 Gm22156-201ENSMUST00000158409 141 ntBASIC3.89□□□□□ -1.79
Ndc1Q8VCB1 Gm7909-201ENSMUST00000182688 614 ntBASIC3.89□□□□□ -1.79
Ndc1Q8VCB1 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC3.89□□□□□ -1.79
Ndc1Q8VCB1 Gm27796-201ENSMUST00000183863 261 ntBASIC3.89□□□□□ -1.79
Ndc1Q8VCB1 Mir6996-201ENSMUST00000183922 61 ntBASIC3.89□□□□□ -1.79
Ndc1Q8VCB1 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC3.89□□□□□ -1.79
Ndc1Q8VCB1 Gm37746-201ENSMUST00000193249 198 ntBASIC3.89□□□□□ -1.79
Ndc1Q8VCB1 Gm42570-201ENSMUST00000195937 292 ntBASIC3.89□□□□□ -1.79
Ndc1Q8VCB1 Gm43855-201ENSMUST00000197462 507 ntBASIC3.89□□□□□ -1.79
Ndc1Q8VCB1 Gm34091-201ENSMUST00000200875 604 ntBASIC3.89□□□□□ -1.79
Ndc1Q8VCB1 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC3.89□□□□□ -1.79
Ndc1Q8VCB1 AC165157.3-201ENSMUST00000220815 103 ntBASIC3.89□□□□□ -1.79
Ndc1Q8VCB1 CT030242.2-201ENSMUST00000221588 148 ntBASIC3.89□□□□□ -1.79
Ndc1Q8VCB1 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC3.89□□□□□ -1.79
Ndc1Q8VCB1 AC147545.1-201ENSMUST00000227528 108 ntBASIC3.89□□□□□ -1.79
Ndc1Q8VCB1 AC133189.2-201ENSMUST00000228527 392 ntBASIC3.89□□□□□ -1.79
Ndc1Q8VCB1 Gm5265-201ENSMUST00000076828 342 ntBASIC3.89□□□□□ -1.79
Ndc1Q8VCB1 Mir28a-201ENSMUST00000083560 86 ntBASIC3.89□□□□□ -1.79
Ndc1Q8VCB1 n-R5s182-201ENSMUST00000083889 107 ntBASIC3.89□□□□□ -1.79
Ndc1Q8VCB1 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC3.89□□□□□ -1.79
Ndc1Q8VCB1 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
Ndc1Q8VCB1 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
Ndc1Q8VCB1 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC3.89□□□□□ -1.79
Ndc1Q8VCB1 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
Ndc1Q8VCB1 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Ndc1Q8VCB1 Gm10484-201ENSMUST00000196372 4759 ntBASIC3.88□□□□□ -1.79
Ndc1Q8VCB1 Gm45557-201ENSMUST00000210004 1651 ntBASIC3.88□□□□□ -1.79
Ndc1Q8VCB1 Gm15151-201ENSMUST00000117106 177 ntBASIC3.88□□□□□ -1.79
Ndc1Q8VCB1 Gm12252-201ENSMUST00000119517 219 ntBASIC3.88□□□□□ -1.79
Ndc1Q8VCB1 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC3.88□□□□□ -1.79
Ndc1Q8VCB1 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC3.88□□□□□ -1.79
Ndc1Q8VCB1 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC3.88□□□□□ -1.79
Ndc1Q8VCB1 Gm22314-201ENSMUST00000158007 281 ntBASIC3.88□□□□□ -1.79
Ndc1Q8VCB1 Gm24898-201ENSMUST00000158133 106 ntBASIC3.88□□□□□ -1.79
Ndc1Q8VCB1 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC3.88□□□□□ -1.79
Ndc1Q8VCB1 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Ndc1Q8VCB1 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC3.88□□□□□ -1.79
Ndc1Q8VCB1 Gm37801-201ENSMUST00000194754 274 ntBASIC3.88□□□□□ -1.79
Ndc1Q8VCB1 Gm29704-201ENSMUST00000196011 253 ntBASIC3.88□□□□□ -1.79
Ndc1Q8VCB1 Gm43853-201ENSMUST00000197162 301 ntBASIC3.88□□□□□ -1.79
Ndc1Q8VCB1 Igkv15-102-201ENSMUST00000197885 287 ntBASIC3.88□□□□□ -1.79
Ndc1Q8VCB1 Gm43424-201ENSMUST00000200484 253 ntBASIC3.88□□□□□ -1.79
Ndc1Q8VCB1 Gm43955-201ENSMUST00000204332 142 ntBASIC3.88□□□□□ -1.79
Ndc1Q8VCB1 Gm44844-201ENSMUST00000207242 336 ntBASIC3.88□□□□□ -1.79
Ndc1Q8VCB1 Gm45315-201ENSMUST00000209283 333 ntBASIC3.88□□□□□ -1.79
Ndc1Q8VCB1 AC158606.1-201ENSMUST00000220078 325 ntBASIC3.88□□□□□ -1.79
Ndc1Q8VCB1 Gm18441-201ENSMUST00000223539 617 ntBASIC3.88□□□□□ -1.79
Ndc1Q8VCB1 Gm26329-201ENSMUST00000093723 110 ntBASIC3.88□□□□□ -1.79
Ndc1Q8VCB1 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
Ndc1Q8VCB1 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
Ndc1Q8VCB1 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC3.88□□□□□ -1.79
Ndc1Q8VCB1 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC3.88□□□□□ -1.79
Ndc1Q8VCB1 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 91.7 ms