Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC4.71□□□□□ -1.66
Trim56Q80VI1 Gm37747-201ENSMUST00000193717 4003 ntBASIC4.71□□□□□ -1.66
Trim56Q80VI1 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Trim56Q80VI1 Gm24281-201ENSMUST00000104234 136 ntBASIC4.71□□□□□ -1.66
Trim56Q80VI1 Gm12782-201ENSMUST00000117519 727 ntBASIC4.71□□□□□ -1.66
Trim56Q80VI1 Gm15026-201ENSMUST00000119219 458 ntBASIC4.71□□□□□ -1.66
Trim56Q80VI1 Gm13967-201ENSMUST00000120404 380 ntBASIC4.71□□□□□ -1.66
Trim56Q80VI1 Gm11448-201ENSMUST00000120427 450 ntBASIC4.71□□□□□ -1.66
Trim56Q80VI1 Gm13903-201ENSMUST00000120945 193 ntBASIC4.71□□□□□ -1.66
Trim56Q80VI1 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
Trim56Q80VI1 Gm7241-201ENSMUST00000159853 357 ntBASIC4.71□□□□□ -1.66
Trim56Q80VI1 Gm27245-201ENSMUST00000184385 376 ntBASIC4.71□□□□□ -1.66
Trim56Q80VI1 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC4.71□□□□□ -1.66
Trim56Q80VI1 Gm4248-201ENSMUST00000196905 316 ntBASIC4.71□□□□□ -1.66
Trim56Q80VI1 Gm44376-201ENSMUST00000197570 128 ntBASIC4.71□□□□□ -1.66
Trim56Q80VI1 Gm42927-201ENSMUST00000200624 3841 ntBASIC4.71□□□□□ -1.66
Trim56Q80VI1 Gm19366-201ENSMUST00000206996 156 ntBASIC4.71□□□□□ -1.66
Trim56Q80VI1 Gm45879-201ENSMUST00000212521 392 ntBASIC4.71□□□□□ -1.66
Trim56Q80VI1 AC158622.1-201ENSMUST00000217107 230 ntBASIC4.71□□□□□ -1.66
Trim56Q80VI1 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
Trim56Q80VI1 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Trim56Q80VI1 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Trim56Q80VI1 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
Trim56Q80VI1 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Trim56Q80VI1 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.71□□□□□ -1.66
Trim56Q80VI1 AC173482.1-201ENSMUST00000224494 3815 ntBASIC4.71□□□□□ -1.66
Trim56Q80VI1 AC135119.1-201ENSMUST00000227935 3717 ntBASIC4.71□□□□□ -1.66
Trim56Q80VI1 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Trim56Q80VI1 Gm8674-201ENSMUST00000179367 3047 ntBASIC4.7□□□□□ -1.66
Trim56Q80VI1 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC4.7□□□□□ -1.66
Trim56Q80VI1 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC4.7□□□□□ -1.66
Trim56Q80VI1 Gm26273-201ENSMUST00000104180 131 ntBASIC4.7□□□□□ -1.66
Trim56Q80VI1 Gm10552-201ENSMUST00000113396 372 ntBASIC4.7□□□□□ -1.66
Trim56Q80VI1 Gm12686-201ENSMUST00000120546 397 ntBASIC4.7□□□□□ -1.66
Trim56Q80VI1 Gm14875-201ENSMUST00000120881 319 ntBASIC4.7□□□□□ -1.66
Trim56Q80VI1 Gm6565-201ENSMUST00000121217 438 ntBASIC4.7□□□□□ -1.66
Trim56Q80VI1 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC4.7□□□□□ -1.66
Trim56Q80VI1 Gm23901-201ENSMUST00000157570 107 ntBASIC4.7□□□□□ -1.66
Trim56Q80VI1 Gm24014-201ENSMUST00000157728 157 ntBASIC4.7□□□□□ -1.66
Trim56Q80VI1 Gm24850-201ENSMUST00000158029 119 ntBASIC4.7□□□□□ -1.66
Trim56Q80VI1 Gm24898-201ENSMUST00000158133 106 ntBASIC4.7□□□□□ -1.66
Trim56Q80VI1 Gm25486-201ENSMUST00000158726 63 ntBASIC4.7□□□□□ -1.66
Trim56Q80VI1 Gm6374-201ENSMUST00000159051 788 ntBASIC4.7□□□□□ -1.66
Trim56Q80VI1 Gm25749-201ENSMUST00000175485 111 ntBASIC4.7□□□□□ -1.66
Trim56Q80VI1 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC4.7□□□□□ -1.66
Trim56Q80VI1 Gm28534-201ENSMUST00000187744 676 ntBASIC4.7□□□□□ -1.66
Trim56Q80VI1 Ighv1-32-201ENSMUST00000195149 351 ntBASIC4.7□□□□□ -1.66
Trim56Q80VI1 n-TSaga9-201ENSMUST00000197675 107 ntBASIC4.7□□□□□ -1.66
Trim56Q80VI1 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Trim56Q80VI1 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC4.7□□□□□ -1.66
Trim56Q80VI1 Gm10042-201ENSMUST00000079884 78 ntBASIC4.7□□□□□ -1.66
Trim56Q80VI1 Gm26121-201ENSMUST00000083364 162 ntBASIC4.7□□□□□ -1.66
Trim56Q80VI1 n-R5s182-201ENSMUST00000083889 107 ntBASIC4.7□□□□□ -1.66
Trim56Q80VI1 Gm6361-201ENSMUST00000091031 435 ntBASIC4.7□□□□□ -1.66
Trim56Q80VI1 Gm26329-201ENSMUST00000093723 110 ntBASIC4.7□□□□□ -1.66
Trim56Q80VI1 Gm8074-201ENSMUST00000095071 252 ntBASIC4.7□□□□□ -1.66
Trim56Q80VI1 AC122840.2-201ENSMUST00000221030 2659 ntBASIC4.7□□□□□ -1.66
Trim56Q80VI1 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Trim56Q80VI1 Gm38069-201ENSMUST00000195360 2144 ntBASIC4.7□□□□□ -1.66
Trim56Q80VI1 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Trim56Q80VI1 Gm43870-201ENSMUST00000205102 4369 ntBASIC4.69□□□□□ -1.66
Trim56Q80VI1 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Trim56Q80VI1 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
Trim56Q80VI1 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Trim56Q80VI1 n-R5s52-201ENSMUST00000104614 113 ntBASIC4.69□□□□□ -1.66
Trim56Q80VI1 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC4.69□□□□□ -1.66
Trim56Q80VI1 Gm12125-201ENSMUST00000117261 736 ntBASIC4.69□□□□□ -1.66
Trim56Q80VI1 Gm14299-201ENSMUST00000117586 397 ntBASIC4.69□□□□□ -1.66
Trim56Q80VI1 Gm8289-201ENSMUST00000144814 1182 ntBASIC4.69□□□□□ -1.66
Trim56Q80VI1 Gm22378-201ENSMUST00000157481 111 ntBASIC4.69□□□□□ -1.66
Trim56Q80VI1 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC4.69□□□□□ -1.66
Trim56Q80VI1 Gm20630-201ENSMUST00000177387 551 ntBASIC4.69□□□□□ -1.66
Trim56Q80VI1 Gm10067-201ENSMUST00000179462 348 ntBASIC4.69□□□□□ -1.66
Trim56Q80VI1 Gm44322-201ENSMUST00000196830 115 ntBASIC4.69□□□□□ -1.66
Trim56Q80VI1 Gm45553-201ENSMUST00000209929 507 ntBASIC4.69□□□□□ -1.66
Trim56Q80VI1 Gm45513-201ENSMUST00000210228 376 ntBASIC4.69□□□□□ -1.66
Trim56Q80VI1 AC166343.1-201ENSMUST00000213261 577 ntBASIC4.69□□□□□ -1.66
Trim56Q80VI1 Gm16419-201ENSMUST00000221057 625 ntBASIC4.69□□□□□ -1.66
Trim56Q80VI1 AC158982.2-201ENSMUST00000226283 184 ntBASIC4.69□□□□□ -1.66
Trim56Q80VI1 Gm22061-201ENSMUST00000082557 107 ntBASIC4.69□□□□□ -1.66
Trim56Q80VI1 Gm25482-201ENSMUST00000083225 107 ntBASIC4.69□□□□□ -1.66
Trim56Q80VI1 Gm24611-201ENSMUST00000083272 107 ntBASIC4.69□□□□□ -1.66
Trim56Q80VI1 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
Trim56Q80VI1 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
Trim56Q80VI1 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC4.69□□□□□ -1.66
Trim56Q80VI1 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Trim56Q80VI1 AC154462.1-201ENSMUST00000228897 2260 ntBASIC4.69□□□□□ -1.66
Trim56Q80VI1 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
Trim56Q80VI1 AC115047.2-201ENSMUST00000214421 1848 ntBASIC4.68□□□□□ -1.66
Trim56Q80VI1 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Trim56Q80VI1 Gm22472-201ENSMUST00000104115 134 ntBASIC4.68□□□□□ -1.66
Trim56Q80VI1 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC4.68□□□□□ -1.66
Trim56Q80VI1 Gm22259-201ENSMUST00000178926 107 ntBASIC4.68□□□□□ -1.66
Trim56Q80VI1 Gm19427-201ENSMUST00000183619 208 ntBASIC4.68□□□□□ -1.66
Trim56Q80VI1 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC4.68□□□□□ -1.66
Trim56Q80VI1 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC4.68□□□□□ -1.66
Trim56Q80VI1 Gm38080-201ENSMUST00000194035 268 ntBASIC4.68□□□□□ -1.66
Trim56Q80VI1 Gm38060-201ENSMUST00000194822 464 ntBASIC4.68□□□□□ -1.66
Trim56Q80VI1 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC4.68□□□□□ -1.66
Trim56Q80VI1 Gm43424-201ENSMUST00000200484 253 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 140.9 ms