Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gm25979-201ENSMUST00000157177 138 ntBASIC2.34□□□□□ -2.04
Shank3Q4ACU6 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
Shank3Q4ACU6 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
Shank3Q4ACU6 Gm26365-201ENSMUST00000179177 94 ntBASIC2.34□□□□□ -2.04
Shank3Q4ACU6 Mir7059-201ENSMUST00000184825 59 ntBASIC2.34□□□□□ -2.04
Shank3Q4ACU6 AC122484.1-201ENSMUST00000221578 177 ntBASIC2.34□□□□□ -2.04
Shank3Q4ACU6 CT571256.1-201ENSMUST00000226045 585 ntBASIC2.34□□□□□ -2.04
Shank3Q4ACU6 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Shank3Q4ACU6 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Shank3Q4ACU6 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Shank3Q4ACU6 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Shank3Q4ACU6 Gm25560-201ENSMUST00000104606 176 ntBASIC2.33□□□□□ -2.04
Shank3Q4ACU6 Gm14879-201ENSMUST00000117308 507 ntBASIC2.33□□□□□ -2.04
Shank3Q4ACU6 Gm14677-201ENSMUST00000117866 486 ntBASIC2.33□□□□□ -2.04
Shank3Q4ACU6 Gm2003-201ENSMUST00000118537 636 ntBASIC2.33□□□□□ -2.04
Shank3Q4ACU6 Gm15090-201ENSMUST00000118787 1196 ntBASIC2.33□□□□□ -2.04
Shank3Q4ACU6 Gm12372-201ENSMUST00000121654 768 ntBASIC2.33□□□□□ -2.04
Shank3Q4ACU6 Gm15089-201ENSMUST00000122332 1196 ntBASIC2.33□□□□□ -2.04
Shank3Q4ACU6 Gm1989-201ENSMUST00000126244 636 ntBASIC2.33□□□□□ -2.04
Shank3Q4ACU6 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC2.33□□□□□ -2.04
Shank3Q4ACU6 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Shank3Q4ACU6 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC2.33□□□□□ -2.04
Shank3Q4ACU6 Gm29597-201ENSMUST00000188035 308 ntBASIC2.33□□□□□ -2.04
Shank3Q4ACU6 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC2.33□□□□□ -2.04
Shank3Q4ACU6 Gm43979-201ENSMUST00000203179 475 ntBASIC2.33□□□□□ -2.04
Shank3Q4ACU6 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Shank3Q4ACU6 AC130823.2-201ENSMUST00000226169 290 ntBASIC2.33□□□□□ -2.04
Shank3Q4ACU6 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Shank3Q4ACU6 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Shank3Q4ACU6 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC2.32□□□□□ -2.04
Shank3Q4ACU6 Gm4855-201ENSMUST00000192270 1967 ntBASIC2.32□□□□□ -2.04
Shank3Q4ACU6 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Shank3Q4ACU6 Gm25728-201ENSMUST00000104525 159 ntBASIC2.32□□□□□ -2.04
Shank3Q4ACU6 Gm22486-201ENSMUST00000116815 137 ntBASIC2.32□□□□□ -2.04
Shank3Q4ACU6 Gm14989-201ENSMUST00000120497 207 ntBASIC2.32□□□□□ -2.04
Shank3Q4ACU6 Gm12876-201ENSMUST00000120975 408 ntBASIC2.32□□□□□ -2.04
Shank3Q4ACU6 Gm15116-201ENSMUST00000122248 663 ntBASIC2.32□□□□□ -2.04
Shank3Q4ACU6 Gm22107-201ENSMUST00000122548 100 ntBASIC2.32□□□□□ -2.04
Shank3Q4ACU6 Gm25981-201ENSMUST00000157921 295 ntBASIC2.32□□□□□ -2.04
Shank3Q4ACU6 Gm17655-201ENSMUST00000167969 255 ntBASIC2.32□□□□□ -2.04
Shank3Q4ACU6 Gm24754-201ENSMUST00000177997 107 ntBASIC2.32□□□□□ -2.04
Shank3Q4ACU6 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC2.32□□□□□ -2.04
Shank3Q4ACU6 Gm27477-201ENSMUST00000184649 143 ntBASIC2.32□□□□□ -2.04
Shank3Q4ACU6 Gm17946-201ENSMUST00000186856 538 ntBASIC2.32□□□□□ -2.04
Shank3Q4ACU6 Gm38281-201ENSMUST00000192301 315 ntBASIC2.32□□□□□ -2.04
Shank3Q4ACU6 Gm18433-201ENSMUST00000192747 197 ntBASIC2.32□□□□□ -2.04
Shank3Q4ACU6 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC2.32□□□□□ -2.04
Shank3Q4ACU6 Gm44954-201ENSMUST00000208513 227 ntBASIC2.32□□□□□ -2.04
Shank3Q4ACU6 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC2.32□□□□□ -2.04
Shank3Q4ACU6 Gm17872-201ENSMUST00000222550 532 ntBASIC2.32□□□□□ -2.04
Shank3Q4ACU6 CT030684.2-201ENSMUST00000228946 826 ntBASIC2.32□□□□□ -2.04
Shank3Q4ACU6 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Shank3Q4ACU6 Gm38265-201ENSMUST00000193479 3766 ntBASIC2.32□□□□□ -2.04
Shank3Q4ACU6 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC2.31□□□□□ -2.04
Shank3Q4ACU6 Gm26406-201ENSMUST00000158503 124 ntBASIC2.31□□□□□ -2.04
Shank3Q4ACU6 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Shank3Q4ACU6 Gm22853-201ENSMUST00000174974 131 ntBASIC2.31□□□□□ -2.04
Shank3Q4ACU6 Gm24080-201ENSMUST00000175178 232 ntBASIC2.31□□□□□ -2.04
Shank3Q4ACU6 Mup-ps7-201ENSMUST00000178292 545 ntBASIC2.31□□□□□ -2.04
Shank3Q4ACU6 Mup-ps8-201ENSMUST00000178663 545 ntBASIC2.31□□□□□ -2.04
Shank3Q4ACU6 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Shank3Q4ACU6 Mup-ps6-201ENSMUST00000179564 545 ntBASIC2.31□□□□□ -2.04
Shank3Q4ACU6 Mir6240-201ENSMUST00000184281 117 ntBASIC2.31□□□□□ -2.04
Shank3Q4ACU6 Gm5731-201ENSMUST00000190969 481 ntBASIC2.31□□□□□ -2.04
Shank3Q4ACU6 Igkv13-76-201ENSMUST00000197621 347 ntBASIC2.31□□□□□ -2.04
Shank3Q4ACU6 AC155314.1-201ENSMUST00000227624 508 ntBASIC2.31□□□□□ -2.04
Shank3Q4ACU6 Gm10088-201ENSMUST00000074116 423 ntBASIC2.31□□□□□ -2.04
Shank3Q4ACU6 Gm25124-201ENSMUST00000083345 164 ntBASIC2.31□□□□□ -2.04
Shank3Q4ACU6 Gm42852-201ENSMUST00000202649 1379 ntBASIC2.31□□□□□ -2.04
Shank3Q4ACU6 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.31□□□□□ -2.04
Shank3Q4ACU6 Gm15095-201ENSMUST00000118996 1430 ntBASIC2.31□□□□□ -2.04
Shank3Q4ACU6 Scarna3b-201ENSMUST00000157533 139 ntBASIC2.31□□□□□ -2.04
Shank3Q4ACU6 Gm24666-201ENSMUST00000158937 167 ntBASIC2.31□□□□□ -2.04
Shank3Q4ACU6 Gm23505-201ENSMUST00000158989 130 ntBASIC2.31□□□□□ -2.04
Shank3Q4ACU6 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC2.31□□□□□ -2.04
Shank3Q4ACU6 Gm6113-201ENSMUST00000180319 639 ntBASIC2.31□□□□□ -2.04
Shank3Q4ACU6 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC2.31□□□□□ -2.04
Shank3Q4ACU6 Gm8403-201ENSMUST00000189712 1298 ntBASIC2.31□□□□□ -2.04
Shank3Q4ACU6 Gm38231-201ENSMUST00000192030 347 ntBASIC2.31□□□□□ -2.04
Shank3Q4ACU6 Gm38268-201ENSMUST00000195813 193 ntBASIC2.31□□□□□ -2.04
Shank3Q4ACU6 Gm43096-201ENSMUST00000196173 421 ntBASIC2.31□□□□□ -2.04
Shank3Q4ACU6 Mir703-201ENSMUST00000197105 109 ntBASIC2.31□□□□□ -2.04
Shank3Q4ACU6 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC2.31□□□□□ -2.04
Shank3Q4ACU6 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC2.31□□□□□ -2.04
Shank3Q4ACU6 CT009696.1-201ENSMUST00000215745 256 ntBASIC2.31□□□□□ -2.04
Shank3Q4ACU6 AC154426.1-201ENSMUST00000225614 1132 ntBASIC2.31□□□□□ -2.04
Shank3Q4ACU6 AC115878.1-201ENSMUST00000227247 334 ntBASIC2.31□□□□□ -2.04
Shank3Q4ACU6 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Shank3Q4ACU6 Gm14292-201ENSMUST00000118761 456 ntBASIC2.3□□□□□ -2.04
Shank3Q4ACU6 Gm13603-201ENSMUST00000119404 83 ntBASIC2.3□□□□□ -2.04
Shank3Q4ACU6 Gm14694-201ENSMUST00000121856 282 ntBASIC2.3□□□□□ -2.04
Shank3Q4ACU6 Gm25945-201ENSMUST00000122484 135 ntBASIC2.3□□□□□ -2.04
Shank3Q4ACU6 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Shank3Q4ACU6 Gm23819-201ENSMUST00000158744 109 ntBASIC2.3□□□□□ -2.04
Shank3Q4ACU6 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Shank3Q4ACU6 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC2.3□□□□□ -2.04
Shank3Q4ACU6 Gm43407-201ENSMUST00000199816 317 ntBASIC2.3□□□□□ -2.04
Shank3Q4ACU6 Gm31520-201ENSMUST00000203048 733 ntBASIC2.3□□□□□ -2.04
Shank3Q4ACU6 Gm44881-201ENSMUST00000205425 367 ntBASIC2.3□□□□□ -2.04
Shank3Q4ACU6 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC2.3□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 164.5 ms