Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Olfr1266-ps1-201ENSMUST00000214850 180 ntBASIC1.91□□□□□ -2.1
Col5a1O88207 AC155927.1-201ENSMUST00000220114 1200 ntTSL 5 BASIC1.91□□□□□ -2.1
Col5a1O88207 AC120540.1-201ENSMUST00000221879 324 ntBASIC1.91□□□□□ -2.1
Col5a1O88207 AC164297.5-201ENSMUST00000224365 198 ntBASIC1.91□□□□□ -2.1
Col5a1O88207 AC125464.1-201ENSMUST00000228013 512 ntBASIC1.91□□□□□ -2.1
Col5a1O88207 Mir16-2-201ENSMUST00000083672 95 ntBASIC1.91□□□□□ -2.1
Col5a1O88207 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC1.91□□□□□ -2.1
Col5a1O88207 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Col5a1O88207 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Col5a1O88207 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
Col5a1O88207 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
Col5a1O88207 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC1.9□□□□□ -2.1
Col5a1O88207 Gm26082-201ENSMUST00000104070 127 ntBASIC1.9□□□□□ -2.11
Col5a1O88207 Gm15951-201ENSMUST00000118377 400 ntBASIC1.9□□□□□ -2.11
Col5a1O88207 Gm15659-201ENSMUST00000118881 341 ntBASIC1.9□□□□□ -2.11
Col5a1O88207 Gm13720-201ENSMUST00000120741 196 ntBASIC1.9□□□□□ -2.11
Col5a1O88207 Gm16458-201ENSMUST00000121428 502 ntBASIC1.9□□□□□ -2.11
Col5a1O88207 Gm7209-201ENSMUST00000122339 333 ntBASIC1.9□□□□□ -2.11
Col5a1O88207 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC1.9□□□□□ -2.11
Col5a1O88207 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC1.9□□□□□ -2.11
Col5a1O88207 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC1.9□□□□□ -2.11
Col5a1O88207 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC1.9□□□□□ -2.11
Col5a1O88207 Gm24478-201ENSMUST00000157439 158 ntBASIC1.9□□□□□ -2.11
Col5a1O88207 Gm23342-201ENSMUST00000158958 115 ntBASIC1.9□□□□□ -2.11
Col5a1O88207 Gm17154-201ENSMUST00000165748 431 ntBASIC1.9□□□□□ -2.11
Col5a1O88207 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
Col5a1O88207 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC1.9□□□□□ -2.11
Col5a1O88207 Gm27342-201ENSMUST00000183530 109 ntBASIC1.9□□□□□ -2.11
Col5a1O88207 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
Col5a1O88207 Gm8403-201ENSMUST00000189712 1298 ntBASIC1.9□□□□□ -2.11
Col5a1O88207 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC1.9□□□□□ -2.11
Col5a1O88207 Gm19066-201ENSMUST00000193232 1078 ntBASIC1.9□□□□□ -2.11
Col5a1O88207 Gm43245-201ENSMUST00000197603 468 ntBASIC1.9□□□□□ -2.11
Col5a1O88207 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC1.9□□□□□ -2.11
Col5a1O88207 Gm44135-201ENSMUST00000205221 368 ntBASIC1.9□□□□□ -2.11
Col5a1O88207 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC1.9□□□□□ -2.11
Col5a1O88207 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC1.9□□□□□ -2.11
Col5a1O88207 AC152979.4-201ENSMUST00000219893 379 ntBASIC1.9□□□□□ -2.11
Col5a1O88207 AC135019.1-201ENSMUST00000219949 307 ntBASIC1.9□□□□□ -2.11
Col5a1O88207 Gm35558-202ENSMUST00000221819 499 ntBASIC1.9□□□□□ -2.11
Col5a1O88207 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
Col5a1O88207 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Col5a1O88207 Gm24150-201ENSMUST00000082759 104 ntBASIC1.9□□□□□ -2.11
Col5a1O88207 Gm13340-201ENSMUST00000117219 1545 ntBASIC1.9□□□□□ -2.11
Col5a1O88207 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Col5a1O88207 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Col5a1O88207 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Col5a1O88207 Gm12225-201ENSMUST00000117995 298 ntBASIC1.89□□□□□ -2.11
Col5a1O88207 Gm12697-201ENSMUST00000118008 667 ntBASIC1.89□□□□□ -2.11
Col5a1O88207 Gm13432-201ENSMUST00000118861 241 ntBASIC1.89□□□□□ -2.11
Col5a1O88207 Gm11582-201ENSMUST00000121041 236 ntBASIC1.89□□□□□ -2.11
Col5a1O88207 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC1.89□□□□□ -2.11
Col5a1O88207 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC1.89□□□□□ -2.11
Col5a1O88207 Gm16588-201ENSMUST00000162889 355 ntBASIC1.89□□□□□ -2.11
Col5a1O88207 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC1.89□□□□□ -2.11
Col5a1O88207 Gm7897-201ENSMUST00000193981 554 ntBASIC1.89□□□□□ -2.11
Col5a1O88207 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC1.89□□□□□ -2.11
Col5a1O88207 Gm9632-201ENSMUST00000195934 643 ntBASIC1.89□□□□□ -2.11
Col5a1O88207 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC1.89□□□□□ -2.11
Col5a1O88207 Gm43142-201ENSMUST00000198670 361 ntBASIC1.89□□□□□ -2.11
Col5a1O88207 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
Col5a1O88207 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC1.89□□□□□ -2.11
Col5a1O88207 Gm43659-201ENSMUST00000200894 628 ntBASIC1.89□□□□□ -2.11
Col5a1O88207 Gm29920-201ENSMUST00000206876 754 ntBASIC1.89□□□□□ -2.11
Col5a1O88207 AL935138.1-201ENSMUST00000215309 196 ntBASIC1.89□□□□□ -2.11
Col5a1O88207 Gm18252-203ENSMUST00000215855 757 ntBASIC1.89□□□□□ -2.11
Col5a1O88207 AC122484.1-201ENSMUST00000221578 177 ntBASIC1.89□□□□□ -2.11
Col5a1O88207 AC168062.2-201ENSMUST00000228907 422 ntBASIC1.89□□□□□ -2.11
Col5a1O88207 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Col5a1O88207 Gm25404-201ENSMUST00000082970 107 ntBASIC1.89□□□□□ -2.11
Col5a1O88207 Gm23452-201ENSMUST00000083327 107 ntBASIC1.89□□□□□ -2.11
Col5a1O88207 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Col5a1O88207 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Col5a1O88207 Gm43498-201ENSMUST00000202002 1486 ntBASIC1.89□□□□□ -2.11
Col5a1O88207 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Col5a1O88207 Gm22091-201ENSMUST00000116908 127 ntBASIC1.89□□□□□ -2.11
Col5a1O88207 Gm13640-201ENSMUST00000118445 264 ntBASIC1.89□□□□□ -2.11
Col5a1O88207 Gm12294-201ENSMUST00000119723 490 ntBASIC1.89□□□□□ -2.11
Col5a1O88207 Gm6587-201ENSMUST00000120219 613 ntBASIC1.89□□□□□ -2.11
Col5a1O88207 Gm22478-201ENSMUST00000122570 154 ntBASIC1.89□□□□□ -2.11
Col5a1O88207 Gm25150-201ENSMUST00000157121 60 ntBASIC1.89□□□□□ -2.11
Col5a1O88207 Gm26345-201ENSMUST00000157534 120 ntBASIC1.89□□□□□ -2.11
Col5a1O88207 Gm23754-201ENSMUST00000157576 63 ntBASIC1.89□□□□□ -2.11
Col5a1O88207 Gm24551-201ENSMUST00000158645 92 ntBASIC1.89□□□□□ -2.11
Col5a1O88207 Gm25944-201ENSMUST00000178758 94 ntBASIC1.89□□□□□ -2.11
Col5a1O88207 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC1.89□□□□□ -2.11
Col5a1O88207 Mir6411-201ENSMUST00000183556 108 ntBASIC1.89□□□□□ -2.11
Col5a1O88207 Gm27668-201ENSMUST00000184188 120 ntBASIC1.89□□□□□ -2.11
Col5a1O88207 Gm29263-201ENSMUST00000188718 463 ntBASIC1.89□□□□□ -2.11
Col5a1O88207 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC1.89□□□□□ -2.11
Col5a1O88207 Gm18635-201ENSMUST00000199020 1060 ntBASIC1.89□□□□□ -2.11
Col5a1O88207 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC1.89□□□□□ -2.11
Col5a1O88207 AC152951.1-201ENSMUST00000218907 266 ntBASIC1.89□□□□□ -2.11
Col5a1O88207 CT010505.1-201ENSMUST00000227026 396 ntBASIC1.89□□□□□ -2.11
Col5a1O88207 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Col5a1O88207 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
Col5a1O88207 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
Col5a1O88207 Gm44925-201ENSMUST00000208879 2110 ntBASIC1.88□□□□□ -2.11
Col5a1O88207 Gm44438-201ENSMUST00000204388 3236 ntBASIC1.88□□□□□ -2.11
Col5a1O88207 AC121598.3-201ENSMUST00000227179 1643 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms