Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
Trav4-3A0A0B4J1K1 AC161758.1-201ENSMUST00000226123 310 ntBASIC0.85□□□□□ -2.27
Trav4-3A0A0B4J1K1 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
Trav4-3A0A0B4J1K1 CT025630.1-201ENSMUST00000227901 172 ntBASIC0.85□□□□□ -2.27
Trav4-3A0A0B4J1K1 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC0.85□□□□□ -2.27
Trav4-3A0A0B4J1K1 Gm24805-201ENSMUST00000082931 104 ntBASIC0.85□□□□□ -2.27
Trav4-3A0A0B4J1K1 Lipi-201ENSMUST00000062721 2082 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
Trav4-3A0A0B4J1K1 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
Trav4-3A0A0B4J1K1 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
Trav4-3A0A0B4J1K1 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
Trav4-3A0A0B4J1K1 Gm14049-201ENSMUST00000121009 636 ntBASIC0.84□□□□□ -2.27
Trav4-3A0A0B4J1K1 Gm14770-201ENSMUST00000122197 312 ntBASIC0.84□□□□□ -2.27
Trav4-3A0A0B4J1K1 Gm22944-201ENSMUST00000158662 133 ntBASIC0.84□□□□□ -2.27
Trav4-3A0A0B4J1K1 Gm7346-201ENSMUST00000169661 476 ntBASIC0.84□□□□□ -2.27
Trav4-3A0A0B4J1K1 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC0.84□□□□□ -2.27
Trav4-3A0A0B4J1K1 Gm27991-201ENSMUST00000184804 137 ntBASIC0.84□□□□□ -2.27
Trav4-3A0A0B4J1K1 Gm37676-201ENSMUST00000195496 507 ntBASIC0.84□□□□□ -2.27
Trav4-3A0A0B4J1K1 Trav12-4-201ENSMUST00000200663 271 ntBASIC0.84□□□□□ -2.27
Trav4-3A0A0B4J1K1 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC0.84□□□□□ -2.27
Trav4-3A0A0B4J1K1 AC165293.1-201ENSMUST00000219669 329 ntBASIC0.84□□□□□ -2.27
Trav4-3A0A0B4J1K1 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
Trav4-3A0A0B4J1K1 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
Trav4-3A0A0B4J1K1 Gm26922-201ENSMUST00000082687 72 ntBASIC0.84□□□□□ -2.27
Trav4-3A0A0B4J1K1 Mir320-201ENSMUST00000083594 82 ntBASIC0.84□□□□□ -2.27
Trav4-3A0A0B4J1K1 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.28
Trav4-3A0A0B4J1K1 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC0.84□□□□□ -2.28
Trav4-3A0A0B4J1K1 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
Trav4-3A0A0B4J1K1 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
Trav4-3A0A0B4J1K1 Gm12897-201ENSMUST00000120341 250 ntBASIC0.83□□□□□ -2.28
Trav4-3A0A0B4J1K1 Gm15536-201ENSMUST00000121411 114 ntBASIC0.83□□□□□ -2.28
Trav4-3A0A0B4J1K1 Gm17038-201ENSMUST00000166586 494 ntBASIC0.83□□□□□ -2.28
Trav4-3A0A0B4J1K1 Gm25994-201ENSMUST00000175392 101 ntBASIC0.83□□□□□ -2.28
Trav4-3A0A0B4J1K1 Gm23415-201ENSMUST00000175519 83 ntBASIC0.83□□□□□ -2.28
Trav4-3A0A0B4J1K1 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
Trav4-3A0A0B4J1K1 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
Trav4-3A0A0B4J1K1 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
Trav4-3A0A0B4J1K1 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC0.83□□□□□ -2.28
Trav4-3A0A0B4J1K1 Gm37377-201ENSMUST00000191733 304 ntBASIC0.83□□□□□ -2.28
Trav4-3A0A0B4J1K1 Gm38075-201ENSMUST00000191979 920 ntBASIC0.83□□□□□ -2.28
Trav4-3A0A0B4J1K1 Gm45173-201ENSMUST00000206819 305 ntBASIC0.83□□□□□ -2.28
Trav4-3A0A0B4J1K1 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
Trav4-3A0A0B4J1K1 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC0.83□□□□□ -2.28
Trav4-3A0A0B4J1K1 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC0.83□□□□□ -2.28
Trav4-3A0A0B4J1K1 Gm23407-201ENSMUST00000082538 91 ntBASIC0.83□□□□□ -2.28
Trav4-3A0A0B4J1K1 Gm23247-201ENSMUST00000083373 107 ntBASIC0.83□□□□□ -2.28
Trav4-3A0A0B4J1K1 Gm8935-202ENSMUST00000105727 1959 ntBASIC0.83□□□□□ -2.28
Trav4-3A0A0B4J1K1 BC022960-201ENSMUST00000119987 1815 ntBASIC0.82□□□□□ -2.28
Trav4-3A0A0B4J1K1 Gm22761-201ENSMUST00000102278 96 ntBASIC0.82□□□□□ -2.28
Trav4-3A0A0B4J1K1 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
Trav4-3A0A0B4J1K1 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC0.82□□□□□ -2.28
Trav4-3A0A0B4J1K1 Gm14238-201ENSMUST00000120227 323 ntBASIC0.82□□□□□ -2.28
Trav4-3A0A0B4J1K1 Gm16458-201ENSMUST00000121428 502 ntBASIC0.82□□□□□ -2.28
Trav4-3A0A0B4J1K1 Gm22485-201ENSMUST00000157990 109 ntBASIC0.82□□□□□ -2.28
Trav4-3A0A0B4J1K1 Gm25971-201ENSMUST00000158953 286 ntBASIC0.82□□□□□ -2.28
Trav4-3A0A0B4J1K1 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC0.82□□□□□ -2.28
Trav4-3A0A0B4J1K1 Mir6383-201ENSMUST00000184545 116 ntBASIC0.82□□□□□ -2.28
Trav4-3A0A0B4J1K1 Gm8392-201ENSMUST00000185647 835 ntBASIC0.82□□□□□ -2.28
Trav4-3A0A0B4J1K1 Gm37000-201ENSMUST00000193058 428 ntBASIC0.82□□□□□ -2.28
Trav4-3A0A0B4J1K1 Gm37054-201ENSMUST00000193481 543 ntBASIC0.82□□□□□ -2.28
Trav4-3A0A0B4J1K1 Gm45689-201ENSMUST00000210522 133 ntBASIC0.82□□□□□ -2.28
Trav4-3A0A0B4J1K1 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC0.82□□□□□ -2.28
Trav4-3A0A0B4J1K1 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC0.82□□□□□ -2.28
Trav4-3A0A0B4J1K1 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC0.82□□□□□ -2.28
Trav4-3A0A0B4J1K1 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
Trav4-3A0A0B4J1K1 Gm44821-201ENSMUST00000208212 2002 ntBASIC0.82□□□□□ -2.28
Trav4-3A0A0B4J1K1 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
Trav4-3A0A0B4J1K1 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
Trav4-3A0A0B4J1K1 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC0.81□□□□□ -2.28
Trav4-3A0A0B4J1K1 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC0.81□□□□□ -2.28
Trav4-3A0A0B4J1K1 Gm13728-201ENSMUST00000117471 400 ntBASIC0.81□□□□□ -2.28
Trav4-3A0A0B4J1K1 Gm13439-201ENSMUST00000117541 409 ntBASIC0.81□□□□□ -2.28
Trav4-3A0A0B4J1K1 Gm11845-201ENSMUST00000117886 327 ntBASIC0.81□□□□□ -2.28
Trav4-3A0A0B4J1K1 Cox20-ps-201ENSMUST00000119872 353 ntBASIC0.81□□□□□ -2.28
Trav4-3A0A0B4J1K1 n-R5s15-201ENSMUST00000122635 111 ntBASIC0.81□□□□□ -2.28
Trav4-3A0A0B4J1K1 n-R5s159-201ENSMUST00000122681 120 ntBASIC0.81□□□□□ -2.28
Trav4-3A0A0B4J1K1 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC0.81□□□□□ -2.28
Trav4-3A0A0B4J1K1 Gm24777-201ENSMUST00000157644 107 ntBASIC0.81□□□□□ -2.28
Trav4-3A0A0B4J1K1 Gm22537-201ENSMUST00000158172 199 ntBASIC0.81□□□□□ -2.28
Trav4-3A0A0B4J1K1 Gm16162-201ENSMUST00000162296 297 ntBASIC0.81□□□□□ -2.28
Trav4-3A0A0B4J1K1 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
Trav4-3A0A0B4J1K1 Gm25958-201ENSMUST00000175114 71 ntBASIC0.81□□□□□ -2.28
Trav4-3A0A0B4J1K1 Mir6376-201ENSMUST00000185149 131 ntBASIC0.81□□□□□ -2.28
Trav4-3A0A0B4J1K1 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC0.81□□□□□ -2.28
Trav4-3A0A0B4J1K1 Ighv12-1-201ENSMUST00000195542 329 ntBASIC0.81□□□□□ -2.28
Trav4-3A0A0B4J1K1 Gm42474-201ENSMUST00000201073 505 ntBASIC0.81□□□□□ -2.28
Trav4-3A0A0B4J1K1 Gm42665-201ENSMUST00000202100 586 ntBASIC0.81□□□□□ -2.28
Trav4-3A0A0B4J1K1 Gm45268-201ENSMUST00000210046 370 ntBASIC0.81□□□□□ -2.28
Trav4-3A0A0B4J1K1 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC0.81□□□□□ -2.28
Trav4-3A0A0B4J1K1 CT025538.2-201ENSMUST00000226083 772 ntBASIC0.81□□□□□ -2.28
Trav4-3A0A0B4J1K1 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
Trav4-3A0A0B4J1K1 Gm23245-201ENSMUST00000083370 135 ntBASIC0.81□□□□□ -2.28
Trav4-3A0A0B4J1K1 Gm22829-201ENSMUST00000083771 106 ntBASIC0.81□□□□□ -2.28
Trav4-3A0A0B4J1K1 Olfr1160-201ENSMUST00000099839 960 ntBASIC0.81□□□□□ -2.28
Trav4-3A0A0B4J1K1 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
Trav4-3A0A0B4J1K1 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
Trav4-3A0A0B4J1K1 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC0.8□□□□□ -2.28
Trav4-3A0A0B4J1K1 n-R5s158-201ENSMUST00000104095 118 ntBASIC0.8□□□□□ -2.28
Trav4-3A0A0B4J1K1 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC0.8□□□□□ -2.28
Trav4-3A0A0B4J1K1 Gm12191-201ENSMUST00000118307 348 ntBASIC0.8□□□□□ -2.28
Trav4-3A0A0B4J1K1 Gm13085-201ENSMUST00000118356 171 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms