Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Gm15466-201ENSMUST00000122299 333 ntBASIC3.04□□□□□ -1.92
Ccdc43Q9CR29 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC3.04□□□□□ -1.92
Ccdc43Q9CR29 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC3.04□□□□□ -1.92
Ccdc43Q9CR29 Gm23137-201ENSMUST00000157559 107 ntBASIC3.04□□□□□ -1.92
Ccdc43Q9CR29 Gm23380-201ENSMUST00000158448 103 ntBASIC3.04□□□□□ -1.92
Ccdc43Q9CR29 Gm23409-201ENSMUST00000158516 237 ntBASIC3.04□□□□□ -1.92
Ccdc43Q9CR29 Gm17166-201ENSMUST00000172006 431 ntBASIC3.04□□□□□ -1.92
Ccdc43Q9CR29 Snord53-201ENSMUST00000175146 78 ntBASIC3.04□□□□□ -1.92
Ccdc43Q9CR29 Mir7578-201ENSMUST00000183455 82 ntBASIC3.04□□□□□ -1.92
Ccdc43Q9CR29 Gm27786-201ENSMUST00000184337 70 ntBASIC3.04□□□□□ -1.92
Ccdc43Q9CR29 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC3.04□□□□□ -1.92
Ccdc43Q9CR29 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC3.04□□□□□ -1.92
Ccdc43Q9CR29 Gm43171-201ENSMUST00000199882 291 ntBASIC3.04□□□□□ -1.92
Ccdc43Q9CR29 Gm43284-201ENSMUST00000200103 253 ntBASIC3.04□□□□□ -1.92
Ccdc43Q9CR29 Gm44478-201ENSMUST00000204875 114 ntBASIC3.04□□□□□ -1.92
Ccdc43Q9CR29 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC3.04□□□□□ -1.92
Ccdc43Q9CR29 AC154576.2-202ENSMUST00000223916 688 ntBASIC3.04□□□□□ -1.92
Ccdc43Q9CR29 AC123656.2-201ENSMUST00000226726 227 ntBASIC3.04□□□□□ -1.92
Ccdc43Q9CR29 AC161572.1-201ENSMUST00000227486 640 ntBASIC3.04□□□□□ -1.92
Ccdc43Q9CR29 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Ccdc43Q9CR29 Mir128-1-201ENSMUST00000083586 70 ntBASIC3.04□□□□□ -1.92
Ccdc43Q9CR29 Gm23741-201ENSMUST00000097237 171 ntBASIC3.04□□□□□ -1.92
Ccdc43Q9CR29 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC3.03□□□□□ -1.92
Ccdc43Q9CR29 Gm8935-201ENSMUST00000066794 2798 ntBASIC3.03□□□□□ -1.92
Ccdc43Q9CR29 Gm22072-201ENSMUST00000116850 121 ntBASIC3.03□□□□□ -1.92
Ccdc43Q9CR29 Gm14073-201ENSMUST00000117344 381 ntBASIC3.03□□□□□ -1.92
Ccdc43Q9CR29 Gm11556-201ENSMUST00000120751 288 ntBASIC3.03□□□□□ -1.92
Ccdc43Q9CR29 Gm11438-201ENSMUST00000121582 189 ntBASIC3.03□□□□□ -1.92
Ccdc43Q9CR29 Gm26027-201ENSMUST00000122725 268 ntBASIC3.03□□□□□ -1.92
Ccdc43Q9CR29 Gm24443-201ENSMUST00000157242 132 ntBASIC3.03□□□□□ -1.92
Ccdc43Q9CR29 Gm22098-201ENSMUST00000157930 85 ntBASIC3.03□□□□□ -1.92
Ccdc43Q9CR29 Gm17377-201ENSMUST00000165184 207 ntBASIC3.03□□□□□ -1.92
Ccdc43Q9CR29 Gm6788-201ENSMUST00000166459 270 ntBASIC3.03□□□□□ -1.92
Ccdc43Q9CR29 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC3.03□□□□□ -1.92
Ccdc43Q9CR29 Zfp950-206ENSMUST00000178819 171 ntBASIC3.03□□□□□ -1.92
Ccdc43Q9CR29 Gm29184-201ENSMUST00000190038 334 ntBASIC3.03□□□□□ -1.92
Ccdc43Q9CR29 Gm38154-201ENSMUST00000195444 340 ntBASIC3.03□□□□□ -1.92
Ccdc43Q9CR29 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC3.03□□□□□ -1.92
Ccdc43Q9CR29 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC3.03□□□□□ -1.92
Ccdc43Q9CR29 Gm19089-201ENSMUST00000197207 613 ntBASIC3.03□□□□□ -1.92
Ccdc43Q9CR29 Gm18635-201ENSMUST00000199020 1060 ntBASIC3.03□□□□□ -1.92
Ccdc43Q9CR29 Gm43600-201ENSMUST00000202134 223 ntBASIC3.03□□□□□ -1.92
Ccdc43Q9CR29 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC3.03□□□□□ -1.92
Ccdc43Q9CR29 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC3.03□□□□□ -1.92
Ccdc43Q9CR29 CT572985.2-201ENSMUST00000220496 211 ntBASIC3.03□□□□□ -1.92
Ccdc43Q9CR29 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Ccdc43Q9CR29 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Ccdc43Q9CR29 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Ccdc43Q9CR29 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Ccdc43Q9CR29 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Ccdc43Q9CR29 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Ccdc43Q9CR29 Gm25500-201ENSMUST00000104426 123 ntBASIC3.02□□□□□ -1.93
Ccdc43Q9CR29 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
Ccdc43Q9CR29 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
Ccdc43Q9CR29 Gm15272-201ENSMUST00000120865 233 ntBASIC3.02□□□□□ -1.93
Ccdc43Q9CR29 Gm22563-201ENSMUST00000157333 269 ntBASIC3.02□□□□□ -1.93
Ccdc43Q9CR29 Gm22858-201ENSMUST00000174972 76 ntBASIC3.02□□□□□ -1.93
Ccdc43Q9CR29 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC3.02□□□□□ -1.93
Ccdc43Q9CR29 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Ccdc43Q9CR29 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Ccdc43Q9CR29 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Ccdc43Q9CR29 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Ccdc43Q9CR29 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Ccdc43Q9CR29 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Ccdc43Q9CR29 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Ccdc43Q9CR29 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Ccdc43Q9CR29 Gm25156-201ENSMUST00000179809 79 ntBASIC3.02□□□□□ -1.93
Ccdc43Q9CR29 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC3.02□□□□□ -1.93
Ccdc43Q9CR29 Mir8103-201ENSMUST00000183945 107 ntBASIC3.02□□□□□ -1.93
Ccdc43Q9CR29 Gm28283-201ENSMUST00000185509 178 ntBASIC3.02□□□□□ -1.93
Ccdc43Q9CR29 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC3.02□□□□□ -1.93
Ccdc43Q9CR29 Gm24350-202ENSMUST00000198309 132 ntBASIC3.02□□□□□ -1.93
Ccdc43Q9CR29 Gm43217-201ENSMUST00000199513 367 ntBASIC3.02□□□□□ -1.93
Ccdc43Q9CR29 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Ccdc43Q9CR29 CT025525.2-201ENSMUST00000227743 423 ntBASIC3.02□□□□□ -1.93
Ccdc43Q9CR29 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Ccdc43Q9CR29 Gm5670-201ENSMUST00000093546 372 ntBASIC3.02□□□□□ -1.93
Ccdc43Q9CR29 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
Ccdc43Q9CR29 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
Ccdc43Q9CR29 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Ccdc43Q9CR29 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
Ccdc43Q9CR29 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Ccdc43Q9CR29 Gm24376-201ENSMUST00000104399 127 ntBASIC3.01□□□□□ -1.93
Ccdc43Q9CR29 Gm23911-201ENSMUST00000104596 134 ntBASIC3.01□□□□□ -1.93
Ccdc43Q9CR29 Gm11357-201ENSMUST00000119758 954 ntBASIC3.01□□□□□ -1.93
Ccdc43Q9CR29 Gm12897-201ENSMUST00000120341 250 ntBASIC3.01□□□□□ -1.93
Ccdc43Q9CR29 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
Ccdc43Q9CR29 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC3.01□□□□□ -1.93
Ccdc43Q9CR29 Gm22651-201ENSMUST00000157872 94 ntBASIC3.01□□□□□ -1.93
Ccdc43Q9CR29 Gm25490-201ENSMUST00000158734 130 ntBASIC3.01□□□□□ -1.93
Ccdc43Q9CR29 Gm17187-201ENSMUST00000164622 410 ntBASIC3.01□□□□□ -1.93
Ccdc43Q9CR29 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC3.01□□□□□ -1.93
Ccdc43Q9CR29 Gm21894-201ENSMUST00000179631 546 ntBASIC3.01□□□□□ -1.93
Ccdc43Q9CR29 Gm27527-201ENSMUST00000183903 99 ntBASIC3.01□□□□□ -1.93
Ccdc43Q9CR29 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Ccdc43Q9CR29 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC3.01□□□□□ -1.93
Ccdc43Q9CR29 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC3.01□□□□□ -1.93
Ccdc43Q9CR29 AC154296.1-201ENSMUST00000198150 67 ntBASIC3.01□□□□□ -1.93
Ccdc43Q9CR29 Gm43004-201ENSMUST00000201872 703 ntBASIC3.01□□□□□ -1.93
Ccdc43Q9CR29 Gm44609-201ENSMUST00000207157 460 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms