Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm28744-201ENSMUST00000189939 340 ntBASIC4.15□□□□□ -1.75
Nkx6-1Q99MA9 Gm29428-201ENSMUST00000190086 409 ntBASIC4.15□□□□□ -1.75
Nkx6-1Q99MA9 Gm37881-201ENSMUST00000193001 421 ntBASIC4.15□□□□□ -1.75
Nkx6-1Q99MA9 Gm37601-201ENSMUST00000194922 394 ntBASIC4.15□□□□□ -1.75
Nkx6-1Q99MA9 Gm43304-201ENSMUST00000196803 326 ntBASIC4.15□□□□□ -1.75
Nkx6-1Q99MA9 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC4.15□□□□□ -1.75
Nkx6-1Q99MA9 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC4.15□□□□□ -1.75
Nkx6-1Q99MA9 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC4.15□□□□□ -1.75
Nkx6-1Q99MA9 AC115034.1-201ENSMUST00000215393 3846 ntBASIC4.15□□□□□ -1.75
Nkx6-1Q99MA9 AC156632.1-201ENSMUST00000220626 3845 ntBASIC4.15□□□□□ -1.75
Nkx6-1Q99MA9 Gm22169-201ENSMUST00000083229 107 ntBASIC4.15□□□□□ -1.75
Nkx6-1Q99MA9 Mir99a-201ENSMUST00000083596 65 ntBASIC4.15□□□□□ -1.75
Nkx6-1Q99MA9 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Nkx6-1Q99MA9 Gm7957-201ENSMUST00000207404 2602 ntBASIC4.15□□□□□ -1.75
Nkx6-1Q99MA9 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Nkx6-1Q99MA9 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
Nkx6-1Q99MA9 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC4.15□□□□□ -1.75
Nkx6-1Q99MA9 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Nkx6-1Q99MA9 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
Nkx6-1Q99MA9 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Nkx6-1Q99MA9 CT025577.1-201ENSMUST00000220862 2846 ntBASIC4.14□□□□□ -1.75
Nkx6-1Q99MA9 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Nkx6-1Q99MA9 Mir879-201ENSMUST00000104703 76 ntBASIC4.14□□□□□ -1.75
Nkx6-1Q99MA9 Gm12261-201ENSMUST00000117499 645 ntBASIC4.14□□□□□ -1.75
Nkx6-1Q99MA9 Gm15026-201ENSMUST00000119219 458 ntBASIC4.14□□□□□ -1.75
Nkx6-1Q99MA9 Gm15029-201ENSMUST00000119742 199 ntBASIC4.14□□□□□ -1.75
Nkx6-1Q99MA9 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC4.14□□□□□ -1.75
Nkx6-1Q99MA9 Gm12042-201ENSMUST00000120479 301 ntBASIC4.14□□□□□ -1.75
Nkx6-1Q99MA9 Gm6565-201ENSMUST00000121217 438 ntBASIC4.14□□□□□ -1.75
Nkx6-1Q99MA9 Gm25177-201ENSMUST00000122634 117 ntBASIC4.14□□□□□ -1.75
Nkx6-1Q99MA9 Gm25054-201ENSMUST00000157370 97 ntBASIC4.14□□□□□ -1.75
Nkx6-1Q99MA9 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC4.14□□□□□ -1.75
Nkx6-1Q99MA9 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Nkx6-1Q99MA9 LOC667541-201ENSMUST00000223408 278 ntBASIC4.14□□□□□ -1.75
Nkx6-1Q99MA9 Gm18441-201ENSMUST00000223539 617 ntBASIC4.14□□□□□ -1.75
Nkx6-1Q99MA9 CT009713.6-201ENSMUST00000223615 294 ntBASIC4.14□□□□□ -1.75
Nkx6-1Q99MA9 AC139294.1-201ENSMUST00000226708 571 ntBASIC4.14□□□□□ -1.75
Nkx6-1Q99MA9 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Nkx6-1Q99MA9 Gm6361-201ENSMUST00000091031 435 ntBASIC4.14□□□□□ -1.75
Nkx6-1Q99MA9 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC4.14□□□□□ -1.75
Nkx6-1Q99MA9 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
Nkx6-1Q99MA9 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
Nkx6-1Q99MA9 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Nkx6-1Q99MA9 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Nkx6-1Q99MA9 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Nkx6-1Q99MA9 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Nkx6-1Q99MA9 Gm32444-201ENSMUST00000195147 3511 ntBASIC4.13□□□□□ -1.75
Nkx6-1Q99MA9 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.13□□□□□ -1.75
Nkx6-1Q99MA9 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Nkx6-1Q99MA9 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC4.13□□□□□ -1.75
Nkx6-1Q99MA9 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Nkx6-1Q99MA9 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Nkx6-1Q99MA9 n-R5s67-201ENSMUST00000104336 114 ntBASIC4.13□□□□□ -1.75
Nkx6-1Q99MA9 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Nkx6-1Q99MA9 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC4.13□□□□□ -1.75
Nkx6-1Q99MA9 Gm12686-201ENSMUST00000120546 397 ntBASIC4.13□□□□□ -1.75
Nkx6-1Q99MA9 Gm14916-201ENSMUST00000121904 204 ntBASIC4.13□□□□□ -1.75
Nkx6-1Q99MA9 Gm13424-201ENSMUST00000122301 354 ntBASIC4.13□□□□□ -1.75
Nkx6-1Q99MA9 Gm24481-201ENSMUST00000157210 102 ntBASIC4.13□□□□□ -1.75
Nkx6-1Q99MA9 Gm24487-201ENSMUST00000178017 63 ntBASIC4.13□□□□□ -1.75
Nkx6-1Q99MA9 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Nkx6-1Q99MA9 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Nkx6-1Q99MA9 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC4.13□□□□□ -1.75
Nkx6-1Q99MA9 Gm27803-201ENSMUST00000183763 119 ntBASIC4.13□□□□□ -1.75
Nkx6-1Q99MA9 Gm27695-201ENSMUST00000184301 91 ntBASIC4.13□□□□□ -1.75
Nkx6-1Q99MA9 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC4.13□□□□□ -1.75
Nkx6-1Q99MA9 Gm44473-201ENSMUST00000204039 152 ntBASIC4.13□□□□□ -1.75
Nkx6-1Q99MA9 AC164304.1-201ENSMUST00000226920 272 ntBASIC4.13□□□□□ -1.75
Nkx6-1Q99MA9 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Nkx6-1Q99MA9 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
Nkx6-1Q99MA9 Gm25482-201ENSMUST00000083225 107 ntBASIC4.13□□□□□ -1.75
Nkx6-1Q99MA9 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Nkx6-1Q99MA9 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Nkx6-1Q99MA9 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Nkx6-1Q99MA9 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Nkx6-1Q99MA9 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Nkx6-1Q99MA9 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Nkx6-1Q99MA9 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
Nkx6-1Q99MA9 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
Nkx6-1Q99MA9 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Nkx6-1Q99MA9 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
Nkx6-1Q99MA9 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Nkx6-1Q99MA9 AC164297.1-201ENSMUST00000224484 1561 ntBASIC4.12□□□□□ -1.75
Nkx6-1Q99MA9 Mir466h-201ENSMUST00000104748 81 ntBASIC4.12□□□□□ -1.75
Nkx6-1Q99MA9 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Nkx6-1Q99MA9 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC4.12□□□□□ -1.75
Nkx6-1Q99MA9 Gm14810-201ENSMUST00000121628 486 ntBASIC4.12□□□□□ -1.75
Nkx6-1Q99MA9 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC4.12□□□□□ -1.75
Nkx6-1Q99MA9 Gm26101-201ENSMUST00000157246 105 ntBASIC4.12□□□□□ -1.75
Nkx6-1Q99MA9 Gm25220-201ENSMUST00000157546 95 ntBASIC4.12□□□□□ -1.75
Nkx6-1Q99MA9 Gm23098-201ENSMUST00000157552 299 ntBASIC4.12□□□□□ -1.75
Nkx6-1Q99MA9 Gm25333-201ENSMUST00000158035 246 ntBASIC4.12□□□□□ -1.75
Nkx6-1Q99MA9 Gm24730-201ENSMUST00000158228 117 ntBASIC4.12□□□□□ -1.75
Nkx6-1Q99MA9 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Nkx6-1Q99MA9 Mir6418-201ENSMUST00000185075 115 ntBASIC4.12□□□□□ -1.75
Nkx6-1Q99MA9 Gm28921-201ENSMUST00000190219 378 ntBASIC4.12□□□□□ -1.75
Nkx6-1Q99MA9 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Nkx6-1Q99MA9 Gm44032-201ENSMUST00000204841 166 ntBASIC4.12□□□□□ -1.75
Nkx6-1Q99MA9 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC4.12□□□□□ -1.75
Nkx6-1Q99MA9 Gm45879-201ENSMUST00000212521 392 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms