Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm38167-201ENSMUST00000195704 1178 ntBASIC4.16□□□□□ -1.74
Ushbp1Q8R370 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC4.16□□□□□ -1.74
Ushbp1Q8R370 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Ushbp1Q8R370 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Ushbp1Q8R370 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Ushbp1Q8R370 Gm22739-201ENSMUST00000083437 160 ntBASIC4.16□□□□□ -1.74
Ushbp1Q8R370 Fam111a-204ENSMUST00000151307 3687 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
Ushbp1Q8R370 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Ushbp1Q8R370 Gm37777-201ENSMUST00000195546 3366 ntBASIC4.16□□□□□ -1.74
Ushbp1Q8R370 Gm40020-201ENSMUST00000215677 1635 ntBASIC4.16□□□□□ -1.74
Ushbp1Q8R370 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
Ushbp1Q8R370 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
Ushbp1Q8R370 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Ushbp1Q8R370 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Ushbp1Q8R370 AC154481.2-201ENSMUST00000222526 3175 ntBASIC4.16□□□□□ -1.74
Ushbp1Q8R370 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC4.16□□□□□ -1.74
Ushbp1Q8R370 Gm8995-201ENSMUST00000184842 7280 ntBASIC4.16□□□□□ -1.74
Ushbp1Q8R370 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Ushbp1Q8R370 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
Ushbp1Q8R370 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
Ushbp1Q8R370 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
Ushbp1Q8R370 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
Ushbp1Q8R370 Gm22831-201ENSMUST00000102473 109 ntBASIC4.15□□□□□ -1.75
Ushbp1Q8R370 Gm12871-201ENSMUST00000118758 438 ntBASIC4.15□□□□□ -1.75
Ushbp1Q8R370 Gm13155-201ENSMUST00000119277 646 ntBASIC4.15□□□□□ -1.75
Ushbp1Q8R370 Gm11556-201ENSMUST00000120751 288 ntBASIC4.15□□□□□ -1.75
Ushbp1Q8R370 Gm14875-201ENSMUST00000120881 319 ntBASIC4.15□□□□□ -1.75
Ushbp1Q8R370 Gm8178-201ENSMUST00000121570 646 ntBASIC4.15□□□□□ -1.75
Ushbp1Q8R370 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC4.15□□□□□ -1.75
Ushbp1Q8R370 Gm23540-201ENSMUST00000157543 164 ntBASIC4.15□□□□□ -1.75
Ushbp1Q8R370 Gm23123-201ENSMUST00000157648 144 ntBASIC4.15□□□□□ -1.75
Ushbp1Q8R370 Gm24847-201ENSMUST00000158032 108 ntBASIC4.15□□□□□ -1.75
Ushbp1Q8R370 Gm24857-201ENSMUST00000158061 310 ntBASIC4.15□□□□□ -1.75
Ushbp1Q8R370 Gm24727-201ENSMUST00000158231 144 ntBASIC4.15□□□□□ -1.75
Ushbp1Q8R370 Gm24499-201ENSMUST00000158446 104 ntBASIC4.15□□□□□ -1.75
Ushbp1Q8R370 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC4.15□□□□□ -1.75
Ushbp1Q8R370 Gm26195-201ENSMUST00000175035 101 ntBASIC4.15□□□□□ -1.75
Ushbp1Q8R370 Gm24518-201ENSMUST00000180275 94 ntBASIC4.15□□□□□ -1.75
Ushbp1Q8R370 Mir6338-201ENSMUST00000183389 109 ntBASIC4.15□□□□□ -1.75
Ushbp1Q8R370 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC4.15□□□□□ -1.75
Ushbp1Q8R370 Gm5829-201ENSMUST00000191383 351 ntBASIC4.15□□□□□ -1.75
Ushbp1Q8R370 Gm37343-201ENSMUST00000192542 111 ntBASIC4.15□□□□□ -1.75
Ushbp1Q8R370 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC4.15□□□□□ -1.75
Ushbp1Q8R370 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC4.15□□□□□ -1.75
Ushbp1Q8R370 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Ushbp1Q8R370 AC132437.1-201ENSMUST00000218308 320 ntBASIC4.15□□□□□ -1.75
Ushbp1Q8R370 AC125379.1-201ENSMUST00000221928 111 ntBASIC4.15□□□□□ -1.75
Ushbp1Q8R370 CT485612.2-201ENSMUST00000223014 151 ntBASIC4.15□□□□□ -1.75
Ushbp1Q8R370 AC122393.3-201ENSMUST00000226343 1059 ntBASIC4.15□□□□□ -1.75
Ushbp1Q8R370 Olfr197-201ENSMUST00000080031 926 ntBASIC4.15□□□□□ -1.75
Ushbp1Q8R370 Gm23650-201ENSMUST00000083355 70 ntBASIC4.15□□□□□ -1.75
Ushbp1Q8R370 Gm23741-201ENSMUST00000097237 171 ntBASIC4.15□□□□□ -1.75
Ushbp1Q8R370 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Ushbp1Q8R370 Gm17969-201ENSMUST00000185706 2557 ntBASIC4.14□□□□□ -1.75
Ushbp1Q8R370 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
Ushbp1Q8R370 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Ushbp1Q8R370 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Ushbp1Q8R370 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Ushbp1Q8R370 Gm18432-201ENSMUST00000195568 1451 ntBASIC4.14□□□□□ -1.75
Ushbp1Q8R370 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Ushbp1Q8R370 Gm22791-201ENSMUST00000157232 145 ntBASIC4.14□□□□□ -1.75
Ushbp1Q8R370 Gm22216-201ENSMUST00000157557 114 ntBASIC4.14□□□□□ -1.75
Ushbp1Q8R370 Gm24008-201ENSMUST00000157733 138 ntBASIC4.14□□□□□ -1.75
Ushbp1Q8R370 Gm21978-201ENSMUST00000179696 377 ntBASIC4.14□□□□□ -1.75
Ushbp1Q8R370 Gm23523-201ENSMUST00000180190 107 ntBASIC4.14□□□□□ -1.75
Ushbp1Q8R370 Gm28399-201ENSMUST00000186221 318 ntBASIC4.14□□□□□ -1.75
Ushbp1Q8R370 Gm28572-201ENSMUST00000187444 318 ntBASIC4.14□□□□□ -1.75
Ushbp1Q8R370 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC4.14□□□□□ -1.75
Ushbp1Q8R370 Gm29330-201ENSMUST00000190032 699 ntBASIC4.14□□□□□ -1.75
Ushbp1Q8R370 Gm37001-201ENSMUST00000193377 190 ntBASIC4.14□□□□□ -1.75
Ushbp1Q8R370 Mir6375-201ENSMUST00000197176 95 ntBASIC4.14□□□□□ -1.75
Ushbp1Q8R370 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC4.14□□□□□ -1.75
Ushbp1Q8R370 Gm44794-201ENSMUST00000206550 411 ntBASIC4.14□□□□□ -1.75
Ushbp1Q8R370 Gm44513-201ENSMUST00000206811 439 ntBASIC4.14□□□□□ -1.75
Ushbp1Q8R370 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC4.14□□□□□ -1.75
Ushbp1Q8R370 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC4.14□□□□□ -1.75
Ushbp1Q8R370 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC4.14□□□□□ -1.75
Ushbp1Q8R370 AC154506.1-201ENSMUST00000225178 621 ntBASIC4.14□□□□□ -1.75
Ushbp1Q8R370 AC117588.2-201ENSMUST00000228340 311 ntBASIC4.14□□□□□ -1.75
Ushbp1Q8R370 Gm26263-201ENSMUST00000083281 164 ntBASIC4.14□□□□□ -1.75
Ushbp1Q8R370 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Ushbp1Q8R370 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Ushbp1Q8R370 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
Ushbp1Q8R370 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
Ushbp1Q8R370 Gm24096-201ENSMUST00000103905 110 ntBASIC4.13□□□□□ -1.75
Ushbp1Q8R370 Gm11849-201ENSMUST00000121293 261 ntBASIC4.13□□□□□ -1.75
Ushbp1Q8R370 Gm22890-201ENSMUST00000158642 144 ntBASIC4.13□□□□□ -1.75
Ushbp1Q8R370 Gm25369-201ENSMUST00000158848 132 ntBASIC4.13□□□□□ -1.75
Ushbp1Q8R370 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC4.13□□□□□ -1.75
Ushbp1Q8R370 Gm7925-201ENSMUST00000166690 401 ntBASIC4.13□□□□□ -1.75
Ushbp1Q8R370 Gm17162-201ENSMUST00000168538 473 ntBASIC4.13□□□□□ -1.75
Ushbp1Q8R370 Gm26866-201ENSMUST00000180414 802 ntBASIC4.13□□□□□ -1.75
Ushbp1Q8R370 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Ushbp1Q8R370 Mir6914-201ENSMUST00000184999 69 ntBASIC4.13□□□□□ -1.75
Ushbp1Q8R370 Gm29192-201ENSMUST00000190942 377 ntBASIC4.13□□□□□ -1.75
Ushbp1Q8R370 Gm44060-201ENSMUST00000204440 410 ntBASIC4.13□□□□□ -1.75
Ushbp1Q8R370 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC4.13□□□□□ -1.75
Ushbp1Q8R370 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC4.13□□□□□ -1.75
Ushbp1Q8R370 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC4.13□□□□□ -1.75
Ushbp1Q8R370 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms