Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Clrn1Q8K445 Gm7957-201ENSMUST00000207404 2602 ntBASIC3.79□□□□□ -1.8
Clrn1Q8K445 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC3.79□□□□□ -1.8
Clrn1Q8K445 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
Clrn1Q8K445 Gm22472-201ENSMUST00000104115 134 ntBASIC3.79□□□□□ -1.8
Clrn1Q8K445 Gm23481-201ENSMUST00000104173 131 ntBASIC3.79□□□□□ -1.8
Clrn1Q8K445 Gm23322-201ENSMUST00000104464 167 ntBASIC3.79□□□□□ -1.8
Clrn1Q8K445 Gm22493-201ENSMUST00000104494 132 ntBASIC3.79□□□□□ -1.8
Clrn1Q8K445 Mir875-201ENSMUST00000104698 78 ntBASIC3.79□□□□□ -1.8
Clrn1Q8K445 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Clrn1Q8K445 Gm24831-201ENSMUST00000116778 126 ntBASIC3.79□□□□□ -1.8
Clrn1Q8K445 Gm12805-201ENSMUST00000117305 1048 ntBASIC3.79□□□□□ -1.8
Clrn1Q8K445 n-R5s45-201ENSMUST00000122592 110 ntBASIC3.79□□□□□ -1.8
Clrn1Q8K445 Gm22211-201ENSMUST00000158097 156 ntBASIC3.79□□□□□ -1.8
Clrn1Q8K445 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Clrn1Q8K445 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Clrn1Q8K445 Mir6414-201ENSMUST00000183685 82 ntBASIC3.79□□□□□ -1.8
Clrn1Q8K445 Mir6335-201ENSMUST00000184081 98 ntBASIC3.79□□□□□ -1.8
Clrn1Q8K445 Mir6899-201ENSMUST00000184798 64 ntBASIC3.79□□□□□ -1.8
Clrn1Q8K445 Mir6975-201ENSMUST00000184879 61 ntBASIC3.79□□□□□ -1.8
Clrn1Q8K445 Gm29429-201ENSMUST00000187071 121 ntBASIC3.79□□□□□ -1.8
Clrn1Q8K445 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC3.79□□□□□ -1.8
Clrn1Q8K445 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC3.79□□□□□ -1.8
Clrn1Q8K445 Gm17887-201ENSMUST00000200194 547 ntBASIC3.79□□□□□ -1.8
Clrn1Q8K445 Gm44157-201ENSMUST00000204720 410 ntBASIC3.79□□□□□ -1.8
Clrn1Q8K445 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC3.79□□□□□ -1.8
Clrn1Q8K445 AC129541.1-201ENSMUST00000226940 523 ntBASIC3.79□□□□□ -1.8
Clrn1Q8K445 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
Clrn1Q8K445 Gm7452-202ENSMUST00000202891 3039 ntBASIC3.79□□□□□ -1.8
Clrn1Q8K445 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Clrn1Q8K445 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Clrn1Q8K445 Gm45804-201ENSMUST00000212137 3435 ntBASIC3.79□□□□□ -1.8
Clrn1Q8K445 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Clrn1Q8K445 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Clrn1Q8K445 AC122840.2-201ENSMUST00000221030 2659 ntBASIC3.78□□□□□ -1.8
Clrn1Q8K445 Gm5347-201ENSMUST00000210542 2327 ntBASIC3.78□□□□□ -1.8
Clrn1Q8K445 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
Clrn1Q8K445 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
Clrn1Q8K445 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Clrn1Q8K445 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Clrn1Q8K445 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Clrn1Q8K445 Snord66-201ENSMUST00000104051 75 ntBASIC3.78□□□□□ -1.8
Clrn1Q8K445 Gm24318-201ENSMUST00000104490 131 ntBASIC3.78□□□□□ -1.8
Clrn1Q8K445 Gm15215-201ENSMUST00000117773 489 ntBASIC3.78□□□□□ -1.8
Clrn1Q8K445 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC3.78□□□□□ -1.8
Clrn1Q8K445 Gm16250-201ENSMUST00000148974 256 ntBASIC3.78□□□□□ -1.8
Clrn1Q8K445 Gm6265-201ENSMUST00000149263 231 ntBASIC3.78□□□□□ -1.8
Clrn1Q8K445 Gm22561-201ENSMUST00000157331 84 ntBASIC3.78□□□□□ -1.8
Clrn1Q8K445 Gm22611-201ENSMUST00000158288 150 ntBASIC3.78□□□□□ -1.8
Clrn1Q8K445 Gm23760-201ENSMUST00000158350 116 ntBASIC3.78□□□□□ -1.8
Clrn1Q8K445 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC3.78□□□□□ -1.8
Clrn1Q8K445 Gm22114-201ENSMUST00000177756 107 ntBASIC3.78□□□□□ -1.8
Clrn1Q8K445 Mir6355-201ENSMUST00000183687 106 ntBASIC3.78□□□□□ -1.8
Clrn1Q8K445 Gm27521-201ENSMUST00000184022 64 ntBASIC3.78□□□□□ -1.8
Clrn1Q8K445 Gm5372-201ENSMUST00000187540 409 ntBASIC3.78□□□□□ -1.8
Clrn1Q8K445 Gm28364-201ENSMUST00000187908 334 ntTSL 3 BASIC3.78□□□□□ -1.8
Clrn1Q8K445 Gm20257-202ENSMUST00000188643 130 ntBASIC3.78□□□□□ -1.8
Clrn1Q8K445 Gm8790-201ENSMUST00000194108 322 ntBASIC3.78□□□□□ -1.8
Clrn1Q8K445 Gm42451-201ENSMUST00000197410 244 ntBASIC3.78□□□□□ -1.8
Clrn1Q8K445 Gm4644-201ENSMUST00000197587 400 ntBASIC3.78□□□□□ -1.8
Clrn1Q8K445 Gm19366-201ENSMUST00000206996 156 ntBASIC3.78□□□□□ -1.8
Clrn1Q8K445 Gm44871-201ENSMUST00000207821 497 ntBASIC3.78□□□□□ -1.8
Clrn1Q8K445 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC3.78□□□□□ -1.8
Clrn1Q8K445 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
Clrn1Q8K445 Gm46389-201ENSMUST00000223199 392 ntBASIC3.78□□□□□ -1.8
Clrn1Q8K445 Gm18441-201ENSMUST00000223539 617 ntBASIC3.78□□□□□ -1.8
Clrn1Q8K445 AC124346.2-201ENSMUST00000217986 5083 ntBASIC3.78□□□□□ -1.8
Clrn1Q8K445 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Clrn1Q8K445 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Clrn1Q8K445 Gm42927-201ENSMUST00000200624 3841 ntBASIC3.78□□□□□ -1.8
Clrn1Q8K445 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
Clrn1Q8K445 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Clrn1Q8K445 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Clrn1Q8K445 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Clrn1Q8K445 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
Clrn1Q8K445 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
Clrn1Q8K445 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
Clrn1Q8K445 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Clrn1Q8K445 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
Clrn1Q8K445 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Clrn1Q8K445 Mir701-201ENSMUST00000102208 109 ntBASIC3.77□□□□□ -1.81
Clrn1Q8K445 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Clrn1Q8K445 Gm22936-201ENSMUST00000103955 126 ntBASIC3.77□□□□□ -1.81
Clrn1Q8K445 Gm11935-201ENSMUST00000118608 399 ntBASIC3.77□□□□□ -1.81
Clrn1Q8K445 Gm11456-201ENSMUST00000121070 256 ntBASIC3.77□□□□□ -1.81
Clrn1Q8K445 Gm14581-201ENSMUST00000121726 198 ntBASIC3.77□□□□□ -1.81
Clrn1Q8K445 Gm25104-201ENSMUST00000122476 163 ntBASIC3.77□□□□□ -1.81
Clrn1Q8K445 Gm12238-201ENSMUST00000127764 124 ntBASIC3.77□□□□□ -1.81
Clrn1Q8K445 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Clrn1Q8K445 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC3.77□□□□□ -1.81
Clrn1Q8K445 Gm22219-201ENSMUST00000157562 319 ntBASIC3.77□□□□□ -1.81
Clrn1Q8K445 Gm25386-201ENSMUST00000157814 288 ntBASIC3.77□□□□□ -1.81
Clrn1Q8K445 Nron-204ENSMUST00000158971 370 ntBASIC3.77□□□□□ -1.81
Clrn1Q8K445 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC3.77□□□□□ -1.81
Clrn1Q8K445 Gm22398-201ENSMUST00000174941 125 ntBASIC3.77□□□□□ -1.81
Clrn1Q8K445 Gm25956-201ENSMUST00000175115 217 ntBASIC3.77□□□□□ -1.81
Clrn1Q8K445 Gm25731-201ENSMUST00000175167 125 ntBASIC3.77□□□□□ -1.81
Clrn1Q8K445 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC3.77□□□□□ -1.81
Clrn1Q8K445 Gm7909-201ENSMUST00000182688 614 ntBASIC3.77□□□□□ -1.81
Clrn1Q8K445 Mir7074-201ENSMUST00000183884 63 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms