Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm23221-201ENSMUST00000158118 93 ntBASIC0.67□□□□□ -2.3
Ush2AQ2QI47 Gm28398-201ENSMUST00000186587 166 ntTSL 5 BASIC0.67□□□□□ -2.3
Ush2AQ2QI47 Gm29653-201ENSMUST00000187192 166 ntTSL 5 BASIC0.67□□□□□ -2.3
Ush2AQ2QI47 Gm28810-201ENSMUST00000188173 166 ntTSL 5 BASIC0.67□□□□□ -2.3
Ush2AQ2QI47 Gm28575-201ENSMUST00000188234 166 ntTSL 5 BASIC0.67□□□□□ -2.3
Ush2AQ2QI47 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC0.67□□□□□ -2.3
Ush2AQ2QI47 Gm28132-201ENSMUST00000189901 166 ntTSL 5 BASIC0.67□□□□□ -2.3
Ush2AQ2QI47 Gm29580-201ENSMUST00000189921 166 ntTSL 5 BASIC0.67□□□□□ -2.3
Ush2AQ2QI47 Gm28858-201ENSMUST00000190517 166 ntTSL 5 BASIC0.67□□□□□ -2.3
Ush2AQ2QI47 Gm28210-201ENSMUST00000190631 166 ntTSL 5 BASIC0.67□□□□□ -2.3
Ush2AQ2QI47 Gm28336-201ENSMUST00000190743 166 ntTSL 5 BASIC0.67□□□□□ -2.3
Ush2AQ2QI47 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC0.67□□□□□ -2.3
Ush2AQ2QI47 Gm29042-201ENSMUST00000191564 166 ntTSL 5 BASIC0.67□□□□□ -2.3
Ush2AQ2QI47 Gm37998-201ENSMUST00000195699 166 ntTSL 5 BASIC0.67□□□□□ -2.3
Ush2AQ2QI47 Gm45375-201ENSMUST00000210338 280 ntBASIC0.67□□□□□ -2.3
Ush2AQ2QI47 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC0.67□□□□□ -2.3
Ush2AQ2QI47 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.67□□□□□ -2.3
Ush2AQ2QI47 Gm13714-201ENSMUST00000117313 221 ntBASIC0.67□□□□□ -2.3
Ush2AQ2QI47 Gm14366-201ENSMUST00000121970 730 ntBASIC0.67□□□□□ -2.3
Ush2AQ2QI47 Gm22217-201ENSMUST00000157556 313 ntBASIC0.67□□□□□ -2.3
Ush2AQ2QI47 Gm16546-201ENSMUST00000159442 355 ntBASIC0.67□□□□□ -2.3
Ush2AQ2QI47 Gm3027-201ENSMUST00000167579 451 ntBASIC0.67□□□□□ -2.3
Ush2AQ2QI47 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC0.67□□□□□ -2.3
Ush2AQ2QI47 Gm21809-201ENSMUST00000178495 468 ntBASIC0.67□□□□□ -2.3
Ush2AQ2QI47 Gm27233-201ENSMUST00000184030 307 ntBASIC0.67□□□□□ -2.3
Ush2AQ2QI47 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC0.67□□□□□ -2.3
Ush2AQ2QI47 Gm45616-201ENSMUST00000211711 319 ntBASIC0.67□□□□□ -2.3
Ush2AQ2QI47 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC0.67□□□□□ -2.3
Ush2AQ2QI47 CT030170.3-201ENSMUST00000221205 1815 ntBASIC0.67□□□□□ -2.3
Ush2AQ2QI47 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
Ush2AQ2QI47 Gm28151-201ENSMUST00000189404 951 ntBASIC0.67□□□□□ -2.3
Ush2AQ2QI47 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC0.67□□□□□ -2.3
Ush2AQ2QI47 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC0.67□□□□□ -2.3
Ush2AQ2QI47 AC124729.1-202ENSMUST00000225587 938 ntBASIC0.67□□□□□ -2.3
Ush2AQ2QI47 Gm24258-201ENSMUST00000083739 133 ntBASIC0.67□□□□□ -2.3
Ush2AQ2QI47 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
Ush2AQ2QI47 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
Ush2AQ2QI47 Gm11891-201ENSMUST00000121241 619 ntBASIC0.67□□□□□ -2.3
Ush2AQ2QI47 Gm27163-201ENSMUST00000184767 409 ntBASIC0.67□□□□□ -2.3
Ush2AQ2QI47 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC0.67□□□□□ -2.3
Ush2AQ2QI47 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC0.67□□□□□ -2.3
Ush2AQ2QI47 Gm28500-201ENSMUST00000190286 151 ntBASIC0.66□□□□□ -2.3
Ush2AQ2QI47 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
Ush2AQ2QI47 Gm19649-201ENSMUST00000201126 822 ntBASIC0.66□□□□□ -2.3
Ush2AQ2QI47 AC123064.2-201ENSMUST00000217758 193 ntBASIC0.66□□□□□ -2.3
Ush2AQ2QI47 AC154329.2-201ENSMUST00000225257 383 ntBASIC0.66□□□□□ -2.3
Ush2AQ2QI47 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
Ush2AQ2QI47 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
Ush2AQ2QI47 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC0.66□□□□□ -2.3
Ush2AQ2QI47 Gm23960-201ENSMUST00000157206 131 ntBASIC0.66□□□□□ -2.3
Ush2AQ2QI47 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
Ush2AQ2QI47 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC0.66□□□□□ -2.3
Ush2AQ2QI47 Gm45742-201ENSMUST00000212400 433 ntBASIC0.66□□□□□ -2.3
Ush2AQ2QI47 Hamp-201ENSMUST00000062620 410 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
Ush2AQ2QI47 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC0.66□□□□□ -2.3
Ush2AQ2QI47 Gm5322-201ENSMUST00000206142 699 ntBASIC0.66□□□□□ -2.3
Ush2AQ2QI47 Gm6358-201ENSMUST00000089101 156 ntAPPRIS ALT2 BASIC0.66□□□□□ -2.3
Ush2AQ2QI47 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
Ush2AQ2QI47 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
Ush2AQ2QI47 Gm37987-201ENSMUST00000194999 825 ntBASIC0.66□□□□□ -2.3
Ush2AQ2QI47 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC0.65□□□□□ -2.3
Ush2AQ2QI47 Gm22494-201ENSMUST00000104495 128 ntBASIC0.65□□□□□ -2.3
Ush2AQ2QI47 Gm18892-201ENSMUST00000217628 881 ntBASIC0.65□□□□□ -2.3
Ush2AQ2QI47 Gm24208-201ENSMUST00000082783 135 ntBASIC0.65□□□□□ -2.3
Ush2AQ2QI47 Gm42639-201ENSMUST00000197061 1871 ntBASIC0.65□□□□□ -2.31
Ush2AQ2QI47 Gm42536-201ENSMUST00000197562 1613 ntBASIC0.65□□□□□ -2.31
Ush2AQ2QI47 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC0.65□□□□□ -2.31
Ush2AQ2QI47 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
Ush2AQ2QI47 AC158521.1-201ENSMUST00000225295 660 ntBASIC0.65□□□□□ -2.31
Ush2AQ2QI47 Gm25697-201ENSMUST00000082902 98 ntBASIC0.65□□□□□ -2.31
Ush2AQ2QI47 Snord14d-201ENSMUST00000083424 86 ntBASIC0.65□□□□□ -2.31
Ush2AQ2QI47 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
Ush2AQ2QI47 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
Ush2AQ2QI47 Gm25047-201ENSMUST00000122667 104 ntBASIC0.65□□□□□ -2.31
Ush2AQ2QI47 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC0.65□□□□□ -2.31
Ush2AQ2QI47 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
Ush2AQ2QI47 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC0.65□□□□□ -2.31
Ush2AQ2QI47 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC0.65□□□□□ -2.31
Ush2AQ2QI47 Gm22418-201ENSMUST00000180326 107 ntBASIC0.65□□□□□ -2.31
Ush2AQ2QI47 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC0.65□□□□□ -2.31
Ush2AQ2QI47 Mir7232-201ENSMUST00000197929 74 ntBASIC0.65□□□□□ -2.31
Ush2AQ2QI47 Mir6896-201ENSMUST00000198033 73 ntBASIC0.65□□□□□ -2.31
Ush2AQ2QI47 Gm43944-201ENSMUST00000205220 120 ntBASIC0.65□□□□□ -2.31
Ush2AQ2QI47 Gm19137-201ENSMUST00000213790 1164 ntBASIC0.65□□□□□ -2.31
Ush2AQ2QI47 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
Ush2AQ2QI47 mt-Tl1-201ENSMUST00000082391 75 ntBASIC0.65□□□□□ -2.31
Ush2AQ2QI47 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC0.65□□□□□ -2.31
Ush2AQ2QI47 n-R5s67-201ENSMUST00000104336 114 ntBASIC0.64□□□□□ -2.31
Ush2AQ2QI47 Gm6373-201ENSMUST00000121026 360 ntBASIC0.64□□□□□ -2.31
Ush2AQ2QI47 Gm22817-201ENSMUST00000157448 356 ntBASIC0.64□□□□□ -2.31
Ush2AQ2QI47 Gm22136-201ENSMUST00000158751 268 ntBASIC0.64□□□□□ -2.31
Ush2AQ2QI47 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
Ush2AQ2QI47 Mir6346-201ENSMUST00000183982 81 ntBASIC0.64□□□□□ -2.31
Ush2AQ2QI47 Gm27980-201ENSMUST00000184094 169 ntBASIC0.64□□□□□ -2.31
Ush2AQ2QI47 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC0.64□□□□□ -2.31
Ush2AQ2QI47 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC0.64□□□□□ -2.31
Ush2AQ2QI47 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC0.64□□□□□ -2.31
Ush2AQ2QI47 Snord118-201ENSMUST00000082965 135 ntBASIC0.64□□□□□ -2.31
Ush2AQ2QI47 Gm15125-201ENSMUST00000116185 800 ntBASIC0.64□□□□□ -2.31
Ush2AQ2QI47 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC0.64□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms