Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 CT025606.1-201ENSMUST00000218273 324 ntBASIC1.86□□□□□ -2.11
Nkx3-1P97436 Gm3333-202ENSMUST00000221763 1044 ntBASIC1.86□□□□□ -2.11
Nkx3-1P97436 AC125523.1-201ENSMUST00000228018 934 ntBASIC1.86□□□□□ -2.11
Nkx3-1P97436 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Nkx3-1P97436 Gm25856-201ENSMUST00000082786 75 ntBASIC1.86□□□□□ -2.11
Nkx3-1P97436 Gm24254-201ENSMUST00000083702 104 ntBASIC1.86□□□□□ -2.11
Nkx3-1P97436 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
Nkx3-1P97436 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Nkx3-1P97436 Gm43753-201ENSMUST00000196539 3309 ntBASIC1.86□□□□□ -2.11
Nkx3-1P97436 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
Nkx3-1P97436 Gm15314-201ENSMUST00000120740 1887 ntBASIC1.86□□□□□ -2.11
Nkx3-1P97436 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Nkx3-1P97436 AC158598.1-201ENSMUST00000214349 3847 ntBASIC1.85□□□□□ -2.11
Nkx3-1P97436 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Nkx3-1P97436 Gm3081-201ENSMUST00000193413 3025 ntBASIC1.85□□□□□ -2.11
Nkx3-1P97436 Gm14669-201ENSMUST00000118841 250 ntBASIC1.85□□□□□ -2.11
Nkx3-1P97436 Gm13627-201ENSMUST00000119700 706 ntBASIC1.85□□□□□ -2.11
Nkx3-1P97436 Gm11252-201ENSMUST00000120572 939 ntBASIC1.85□□□□□ -2.11
Nkx3-1P97436 Gm25107-201ENSMUST00000122472 129 ntBASIC1.85□□□□□ -2.11
Nkx3-1P97436 Gm24840-201ENSMUST00000122603 147 ntBASIC1.85□□□□□ -2.11
Nkx3-1P97436 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC1.85□□□□□ -2.11
Nkx3-1P97436 Gm22083-201ENSMUST00000157586 102 ntBASIC1.85□□□□□ -2.11
Nkx3-1P97436 Nron-204ENSMUST00000158971 370 ntBASIC1.85□□□□□ -2.11
Nkx3-1P97436 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
Nkx3-1P97436 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC1.85□□□□□ -2.11
Nkx3-1P97436 Mir6411-201ENSMUST00000183556 108 ntBASIC1.85□□□□□ -2.11
Nkx3-1P97436 Gm27991-201ENSMUST00000184804 137 ntBASIC1.85□□□□□ -2.11
Nkx3-1P97436 Gm19193-201ENSMUST00000190263 590 ntBASIC1.85□□□□□ -2.11
Nkx3-1P97436 Gm6059-201ENSMUST00000196903 340 ntBASIC1.85□□□□□ -2.11
Nkx3-1P97436 Gm19089-201ENSMUST00000197207 613 ntBASIC1.85□□□□□ -2.11
Nkx3-1P97436 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC1.85□□□□□ -2.11
Nkx3-1P97436 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Nkx3-1P97436 AC101984.1-201ENSMUST00000219639 402 ntBASIC1.85□□□□□ -2.11
Nkx3-1P97436 AC154552.4-201ENSMUST00000222171 151 ntBASIC1.85□□□□□ -2.11
Nkx3-1P97436 Zmym2-202ENSMUST00000223669 1281 ntBASIC1.85□□□□□ -2.11
Nkx3-1P97436 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Nkx3-1P97436 Gm24661-201ENSMUST00000083205 104 ntBASIC1.85□□□□□ -2.11
Nkx3-1P97436 Gm25126-201ENSMUST00000083343 102 ntBASIC1.85□□□□□ -2.11
Nkx3-1P97436 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Nkx3-1P97436 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Nkx3-1P97436 Gm11429-201ENSMUST00000119089 144 ntBASIC1.84□□□□□ -2.11
Nkx3-1P97436 Gm9225-201ENSMUST00000121921 836 ntBASIC1.84□□□□□ -2.11
Nkx3-1P97436 Gm2830-201ENSMUST00000140330 385 ntBASIC1.84□□□□□ -2.11
Nkx3-1P97436 Trav20-201ENSMUST00000142754 347 ntBASIC1.84□□□□□ -2.11
Nkx3-1P97436 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC1.84□□□□□ -2.11
Nkx3-1P97436 Gm24237-201ENSMUST00000157790 132 ntBASIC1.84□□□□□ -2.11
Nkx3-1P97436 Gm24858-201ENSMUST00000158058 323 ntBASIC1.84□□□□□ -2.11
Nkx3-1P97436 Gm24900-201ENSMUST00000158128 134 ntBASIC1.84□□□□□ -2.11
Nkx3-1P97436 Gm17183-201ENSMUST00000171170 493 ntBASIC1.84□□□□□ -2.11
Nkx3-1P97436 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Nkx3-1P97436 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC1.84□□□□□ -2.11
Nkx3-1P97436 Gm20648-201ENSMUST00000175815 328 ntBASIC1.84□□□□□ -2.11
Nkx3-1P97436 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
Nkx3-1P97436 Gm24968-201ENSMUST00000179817 107 ntBASIC1.84□□□□□ -2.11
Nkx3-1P97436 Gm26701-201ENSMUST00000181571 234 ntBASIC1.84□□□□□ -2.11
Nkx3-1P97436 Npn2-202ENSMUST00000189275 235 ntBASIC1.84□□□□□ -2.11
Nkx3-1P97436 Gm8403-201ENSMUST00000189712 1298 ntBASIC1.84□□□□□ -2.11
Nkx3-1P97436 Trbv12-3-201ENSMUST00000192675 372 ntBASIC1.84□□□□□ -2.11
Nkx3-1P97436 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC1.84□□□□□ -2.11
Nkx3-1P97436 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC1.84□□□□□ -2.11
Nkx3-1P97436 Gm43096-201ENSMUST00000196173 421 ntBASIC1.84□□□□□ -2.11
Nkx3-1P97436 Gm29920-201ENSMUST00000206876 754 ntBASIC1.84□□□□□ -2.11
Nkx3-1P97436 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC1.84□□□□□ -2.11
Nkx3-1P97436 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC1.84□□□□□ -2.11
Nkx3-1P97436 AC157570.3-201ENSMUST00000219281 205 ntBASIC1.84□□□□□ -2.11
Nkx3-1P97436 Gm35558-202ENSMUST00000221819 499 ntBASIC1.84□□□□□ -2.11
Nkx3-1P97436 AC132881.2-201ENSMUST00000225474 709 ntBASIC1.84□□□□□ -2.11
Nkx3-1P97436 AC183092.2-201ENSMUST00000225542 1153 ntBASIC1.84□□□□□ -2.11
Nkx3-1P97436 Gm24313-201ENSMUST00000082561 133 ntBASIC1.84□□□□□ -2.11
Nkx3-1P97436 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Nkx3-1P97436 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
Nkx3-1P97436 Gm7133-201ENSMUST00000187797 2039 ntBASIC1.84□□□□□ -2.12
Nkx3-1P97436 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
Nkx3-1P97436 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC1.83□□□□□ -2.12
Nkx3-1P97436 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Nkx3-1P97436 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Nkx3-1P97436 Mir1192-201ENSMUST00000116976 121 ntBASIC1.83□□□□□ -2.12
Nkx3-1P97436 Gm13082-201ENSMUST00000118877 561 ntBASIC1.83□□□□□ -2.12
Nkx3-1P97436 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC1.83□□□□□ -2.12
Nkx3-1P97436 Gm23819-201ENSMUST00000158744 109 ntBASIC1.83□□□□□ -2.12
Nkx3-1P97436 Gm22093-201ENSMUST00000158980 111 ntBASIC1.83□□□□□ -2.12
Nkx3-1P97436 Gm29330-201ENSMUST00000190032 699 ntBASIC1.83□□□□□ -2.12
Nkx3-1P97436 Gm28098-201ENSMUST00000191361 699 ntBASIC1.83□□□□□ -2.12
Nkx3-1P97436 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC1.83□□□□□ -2.12
Nkx3-1P97436 Mir7217-201ENSMUST00000200304 62 ntBASIC1.83□□□□□ -2.12
Nkx3-1P97436 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Nkx3-1P97436 Trav12-4-201ENSMUST00000200663 271 ntBASIC1.83□□□□□ -2.12
Nkx3-1P97436 Gm45146-201ENSMUST00000207108 221 ntBASIC1.83□□□□□ -2.12
Nkx3-1P97436 Gm17850-201ENSMUST00000210023 1154 ntBASIC1.83□□□□□ -2.12
Nkx3-1P97436 AC122465.2-201ENSMUST00000221774 354 ntBASIC1.83□□□□□ -2.12
Nkx3-1P97436 AC154532.2-201ENSMUST00000228947 598 ntBASIC1.83□□□□□ -2.12
Nkx3-1P97436 Gm25403-201ENSMUST00000082971 143 ntBASIC1.83□□□□□ -2.12
Nkx3-1P97436 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Nkx3-1P97436 Gm37598-201ENSMUST00000194506 1301 ntBASIC1.83□□□□□ -2.12
Nkx3-1P97436 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Nkx3-1P97436 Gm43373-201ENSMUST00000202552 2870 ntBASIC1.83□□□□□ -2.12
Nkx3-1P97436 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Nkx3-1P97436 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC1.83□□□□□ -2.12
Nkx3-1P97436 AC132221.1-201ENSMUST00000220577 3841 ntBASIC1.82□□□□□ -2.12
Nkx3-1P97436 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 87.5 ms