Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm9377-201ENSMUST00000207227 623 ntBASIC2.59□□□□□ -1.99
Sox3P53784 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC2.59□□□□□ -1.99
Sox3P53784 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Sox3P53784 AC192334.2-201ENSMUST00000223087 1091 ntBASIC2.59□□□□□ -1.99
Sox3P53784 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Sox3P53784 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Sox3P53784 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Sox3P53784 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
Sox3P53784 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
Sox3P53784 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC2.58□□□□□ -2
Sox3P53784 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Sox3P53784 Gm45872-201ENSMUST00000209804 1584 ntBASIC2.58□□□□□ -2
Sox3P53784 Gm42684-201ENSMUST00000197663 3615 ntBASIC2.58□□□□□ -2
Sox3P53784 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.58□□□□□ -2
Sox3P53784 Gm13541-201ENSMUST00000119519 283 ntBASIC2.58□□□□□ -2
Sox3P53784 Gm12639-201ENSMUST00000121400 493 ntBASIC2.58□□□□□ -2
Sox3P53784 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC2.58□□□□□ -2
Sox3P53784 Gm23230-201ENSMUST00000157298 133 ntBASIC2.58□□□□□ -2
Sox3P53784 Gm23538-201ENSMUST00000157535 101 ntBASIC2.58□□□□□ -2
Sox3P53784 Gm16588-201ENSMUST00000162889 355 ntBASIC2.58□□□□□ -2
Sox3P53784 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC2.58□□□□□ -2
Sox3P53784 Gm27921-201ENSMUST00000183968 108 ntBASIC2.58□□□□□ -2
Sox3P53784 Gm8676-201ENSMUST00000184206 637 ntBASIC2.58□□□□□ -2
Sox3P53784 Gm31230-201ENSMUST00000199725 785 ntBASIC2.58□□□□□ -2
Sox3P53784 Gm18414-201ENSMUST00000210858 694 ntBASIC2.58□□□□□ -2
Sox3P53784 Gm18000-201ENSMUST00000212153 800 ntBASIC2.58□□□□□ -2
Sox3P53784 AC101677.1-201ENSMUST00000218590 158 ntBASIC2.58□□□□□ -2
Sox3P53784 AC121844.1-201ENSMUST00000218706 137 ntBASIC2.58□□□□□ -2
Sox3P53784 AC159297.2-201ENSMUST00000219567 1075 ntBASIC2.58□□□□□ -2
Sox3P53784 AC159621.1-201ENSMUST00000223249 163 ntBASIC2.58□□□□□ -2
Sox3P53784 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Sox3P53784 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC2.58□□□□□ -2
Sox3P53784 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC2.58□□□□□ -2
Sox3P53784 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
Sox3P53784 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
Sox3P53784 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Sox3P53784 Gm38382-201ENSMUST00000193790 2499 ntBASIC2.57□□□□□ -2
Sox3P53784 Gm25500-201ENSMUST00000104426 123 ntBASIC2.57□□□□□ -2
Sox3P53784 Gm23803-201ENSMUST00000104610 132 ntBASIC2.57□□□□□ -2
Sox3P53784 Mir190b-201ENSMUST00000104803 80 ntBASIC2.57□□□□□ -2
Sox3P53784 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC2.57□□□□□ -2
Sox3P53784 Gm11813-201ENSMUST00000118586 291 ntBASIC2.57□□□□□ -2
Sox3P53784 Gm14292-201ENSMUST00000118761 456 ntBASIC2.57□□□□□ -2
Sox3P53784 Gm11582-201ENSMUST00000121041 236 ntBASIC2.57□□□□□ -2
Sox3P53784 Gm14411-201ENSMUST00000121798 914 ntBASIC2.57□□□□□ -2
Sox3P53784 Gm23470-201ENSMUST00000157129 120 ntBASIC2.57□□□□□ -2
Sox3P53784 Gm22755-201ENSMUST00000157143 100 ntBASIC2.57□□□□□ -2
Sox3P53784 Gm23325-201ENSMUST00000157422 129 ntBASIC2.57□□□□□ -2
Sox3P53784 Gm25365-201ENSMUST00000158852 121 ntBASIC2.57□□□□□ -2
Sox3P53784 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC2.57□□□□□ -2
Sox3P53784 Gm23568-201ENSMUST00000177960 92 ntBASIC2.57□□□□□ -2
Sox3P53784 Gm24829-201ENSMUST00000179245 92 ntBASIC2.57□□□□□ -2
Sox3P53784 Gm21758-201ENSMUST00000179336 819 ntBASIC2.57□□□□□ -2
Sox3P53784 Gm29647-201ENSMUST00000188795 666 ntBASIC2.57□□□□□ -2
Sox3P53784 Gm20832-201ENSMUST00000189076 665 ntBASIC2.57□□□□□ -2
Sox3P53784 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC2.57□□□□□ -2
Sox3P53784 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC2.57□□□□□ -2
Sox3P53784 Gm28241-201ENSMUST00000190916 235 ntBASIC2.57□□□□□ -2
Sox3P53784 Gm28504-201ENSMUST00000190977 666 ntBASIC2.57□□□□□ -2
Sox3P53784 Gm31511-201ENSMUST00000193134 657 ntBASIC2.57□□□□□ -2
Sox3P53784 Gm35843-201ENSMUST00000193716 666 ntBASIC2.57□□□□□ -2
Sox3P53784 Gm30638-201ENSMUST00000195570 656 ntBASIC2.57□□□□□ -2
Sox3P53784 Gm36728-201ENSMUST00000195782 665 ntBASIC2.57□□□□□ -2
Sox3P53784 Gm43171-201ENSMUST00000199882 291 ntBASIC2.57□□□□□ -2
Sox3P53784 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Sox3P53784 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC2.57□□□□□ -2
Sox3P53784 Gm23847-201ENSMUST00000083829 110 ntBASIC2.57□□□□□ -2
Sox3P53784 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Sox3P53784 AC162910.1-201ENSMUST00000221219 1723 ntBASIC2.56□□□□□ -2
Sox3P53784 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Sox3P53784 Gm13614-201ENSMUST00000117306 503 ntBASIC2.56□□□□□ -2
Sox3P53784 Gm11285-201ENSMUST00000118443 322 ntBASIC2.56□□□□□ -2
Sox3P53784 Gm15113-201ENSMUST00000119280 836 ntBASIC2.56□□□□□ -2
Sox3P53784 Gm11943-201ENSMUST00000119473 327 ntBASIC2.56□□□□□ -2
Sox3P53784 Gm13482-201ENSMUST00000119842 254 ntBASIC2.56□□□□□ -2
Sox3P53784 Gm6587-201ENSMUST00000120219 613 ntBASIC2.56□□□□□ -2
Sox3P53784 Gm23118-201ENSMUST00000122657 187 ntBASIC2.56□□□□□ -2
Sox3P53784 Gm24443-201ENSMUST00000157242 132 ntBASIC2.56□□□□□ -2
Sox3P53784 Gm26101-201ENSMUST00000157246 105 ntBASIC2.56□□□□□ -2
Sox3P53784 Gm26173-201ENSMUST00000158416 136 ntBASIC2.56□□□□□ -2
Sox3P53784 Gm17162-201ENSMUST00000168538 473 ntBASIC2.56□□□□□ -2
Sox3P53784 Snord53-201ENSMUST00000175146 78 ntBASIC2.56□□□□□ -2
Sox3P53784 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC2.56□□□□□ -2
Sox3P53784 Gm19257-201ENSMUST00000186121 183 ntBASIC2.56□□□□□ -2
Sox3P53784 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC2.56□□□□□ -2
Sox3P53784 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC2.56□□□□□ -2
Sox3P53784 AC162931.1-201ENSMUST00000214184 267 ntBASIC2.56□□□□□ -2
Sox3P53784 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC2.56□□□□□ -2
Sox3P53784 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.56□□□□□ -2
Sox3P53784 Gm19540-201ENSMUST00000221843 810 ntBASIC2.56□□□□□ -2
Sox3P53784 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Sox3P53784 AC154576.2-202ENSMUST00000223916 688 ntBASIC2.56□□□□□ -2
Sox3P53784 AC117814.1-201ENSMUST00000226135 352 ntBASIC2.56□□□□□ -2
Sox3P53784 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC2.56□□□□□ -2
Sox3P53784 Gm25404-201ENSMUST00000082970 107 ntBASIC2.56□□□□□ -2
Sox3P53784 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
Sox3P53784 Gm21032-201ENSMUST00000208108 2578 ntBASIC2.56□□□□□ -2
Sox3P53784 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.56□□□□□ -2
Sox3P53784 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
Sox3P53784 Gm43663-201ENSMUST00000198643 1505 ntBASIC2.56□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms