Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 AC154506.3-201ENSMUST00000225417 213 ntBASIC2.14□□□□□ -2.07
Sdc1P18828 AC115357.1-201ENSMUST00000227575 466 ntBASIC2.14□□□□□ -2.07
Sdc1P18828 Mir19a-201ENSMUST00000083482 82 ntBASIC2.14□□□□□ -2.07
Sdc1P18828 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC2.14□□□□□ -2.07
Sdc1P18828 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC2.14□□□□□ -2.07
Sdc1P18828 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.13□□□□□ -2.07
Sdc1P18828 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.13□□□□□ -2.07
Sdc1P18828 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Sdc1P18828 Gm26075-201ENSMUST00000104062 121 ntBASIC2.13□□□□□ -2.07
Sdc1P18828 Gm13640-201ENSMUST00000118445 264 ntBASIC2.13□□□□□ -2.07
Sdc1P18828 Gm14292-201ENSMUST00000118761 456 ntBASIC2.13□□□□□ -2.07
Sdc1P18828 Gm14739-201ENSMUST00000120424 802 ntBASIC2.13□□□□□ -2.07
Sdc1P18828 Gm16411-201ENSMUST00000122164 1100 ntBASIC2.13□□□□□ -2.07
Sdc1P18828 Gm25270-201ENSMUST00000122606 138 ntBASIC2.13□□□□□ -2.07
Sdc1P18828 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Sdc1P18828 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC2.13□□□□□ -2.07
Sdc1P18828 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Sdc1P18828 Gm25427-201ENSMUST00000157605 103 ntBASIC2.13□□□□□ -2.07
Sdc1P18828 Mir1934-201ENSMUST00000158127 83 ntBASIC2.13□□□□□ -2.07
Sdc1P18828 Gm24546-201ENSMUST00000158652 102 ntBASIC2.13□□□□□ -2.07
Sdc1P18828 Spin2g-201ENSMUST00000178425 687 ntBASIC2.13□□□□□ -2.07
Sdc1P18828 Gm28956-201ENSMUST00000189047 427 ntBASIC2.13□□□□□ -2.07
Sdc1P18828 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC2.13□□□□□ -2.07
Sdc1P18828 Gm44254-201ENSMUST00000204184 322 ntBASIC2.13□□□□□ -2.07
Sdc1P18828 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC2.13□□□□□ -2.07
Sdc1P18828 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC2.13□□□□□ -2.07
Sdc1P18828 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC2.13□□□□□ -2.07
Sdc1P18828 Gm19118-201ENSMUST00000222554 98 ntBASIC2.13□□□□□ -2.07
Sdc1P18828 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Sdc1P18828 AC192334.2-201ENSMUST00000223087 1091 ntBASIC2.13□□□□□ -2.07
Sdc1P18828 AC160962.2-201ENSMUST00000224761 632 ntBASIC2.13□□□□□ -2.07
Sdc1P18828 Gm9845-201ENSMUST00000056409 598 ntBASIC2.13□□□□□ -2.07
Sdc1P18828 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Sdc1P18828 Gm650-201ENSMUST00000144428 1551 ntBASIC2.13□□□□□ -2.07
Sdc1P18828 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Sdc1P18828 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.13□□□□□ -2.07
Sdc1P18828 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.12□□□□□ -2.07
Sdc1P18828 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC2.12□□□□□ -2.07
Sdc1P18828 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC2.12□□□□□ -2.07
Sdc1P18828 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Sdc1P18828 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Sdc1P18828 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Sdc1P18828 Gm25272-201ENSMUST00000104293 128 ntBASIC2.12□□□□□ -2.07
Sdc1P18828 Gm12697-201ENSMUST00000118008 667 ntBASIC2.12□□□□□ -2.07
Sdc1P18828 Gm15497-201ENSMUST00000119137 551 ntBASIC2.12□□□□□ -2.07
Sdc1P18828 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC2.12□□□□□ -2.07
Sdc1P18828 Gm12006-201ENSMUST00000120786 403 ntBASIC2.12□□□□□ -2.07
Sdc1P18828 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC2.12□□□□□ -2.07
Sdc1P18828 Gm26256-201ENSMUST00000122499 186 ntBASIC2.12□□□□□ -2.07
Sdc1P18828 Gm23791-201ENSMUST00000122553 293 ntBASIC2.12□□□□□ -2.07
Sdc1P18828 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.12□□□□□ -2.07
Sdc1P18828 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC2.12□□□□□ -2.07
Sdc1P18828 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC2.12□□□□□ -2.07
Sdc1P18828 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC2.12□□□□□ -2.07
Sdc1P18828 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC2.12□□□□□ -2.07
Sdc1P18828 Gm27761-201ENSMUST00000184091 131 ntBASIC2.12□□□□□ -2.07
Sdc1P18828 Mir6926-201ENSMUST00000184562 68 ntBASIC2.12□□□□□ -2.07
Sdc1P18828 Mir7232-201ENSMUST00000197929 74 ntBASIC2.12□□□□□ -2.07
Sdc1P18828 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC2.12□□□□□ -2.07
Sdc1P18828 Gm18000-201ENSMUST00000212153 800 ntBASIC2.12□□□□□ -2.07
Sdc1P18828 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.12□□□□□ -2.07
Sdc1P18828 AC154271.1-201ENSMUST00000224780 383 ntBASIC2.12□□□□□ -2.07
Sdc1P18828 Gm22247-201ENSMUST00000082476 131 ntBASIC2.12□□□□□ -2.07
Sdc1P18828 Gm23736-201ENSMUST00000082553 75 ntBASIC2.12□□□□□ -2.07
Sdc1P18828 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
Sdc1P18828 AC122887.2-201ENSMUST00000219465 1603 ntBASIC2.12□□□□□ -2.07
Sdc1P18828 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Sdc1P18828 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.11□□□□□ -2.07
Sdc1P18828 Gm22496-201ENSMUST00000104493 88 ntBASIC2.11□□□□□ -2.07
Sdc1P18828 Gm12106-201ENSMUST00000116006 1200 ntBASIC2.11□□□□□ -2.07
Sdc1P18828 Gm14593-201ENSMUST00000119948 294 ntBASIC2.11□□□□□ -2.07
Sdc1P18828 Gm11229-201ENSMUST00000121993 437 ntBASIC2.11□□□□□ -2.07
Sdc1P18828 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC2.11□□□□□ -2.07
Sdc1P18828 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC2.11□□□□□ -2.07
Sdc1P18828 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
Sdc1P18828 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC2.11□□□□□ -2.07
Sdc1P18828 Gm23600-201ENSMUST00000157260 71 ntBASIC2.11□□□□□ -2.07
Sdc1P18828 Gm24730-201ENSMUST00000158228 117 ntBASIC2.11□□□□□ -2.07
Sdc1P18828 Mir1927-201ENSMUST00000158579 109 ntBASIC2.11□□□□□ -2.07
Sdc1P18828 Gm23476-201ENSMUST00000158881 274 ntBASIC2.11□□□□□ -2.07
Sdc1P18828 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Sdc1P18828 Gm25175-201ENSMUST00000178712 79 ntBASIC2.11□□□□□ -2.07
Sdc1P18828 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC2.11□□□□□ -2.07
Sdc1P18828 Gm19089-201ENSMUST00000197207 613 ntBASIC2.11□□□□□ -2.07
Sdc1P18828 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC2.11□□□□□ -2.07
Sdc1P18828 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Sdc1P18828 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC2.11□□□□□ -2.07
Sdc1P18828 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Sdc1P18828 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
Sdc1P18828 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Sdc1P18828 Gm5670-201ENSMUST00000093546 372 ntBASIC2.11□□□□□ -2.07
Sdc1P18828 Gm23741-201ENSMUST00000097237 171 ntBASIC2.11□□□□□ -2.07
Sdc1P18828 AC169038.1-201ENSMUST00000227378 1352 ntBASIC2.1□□□□□ -2.07
Sdc1P18828 Gm20172-201ENSMUST00000193138 1551 ntBASIC2.1□□□□□ -2.07
Sdc1P18828 Gm25420-201ENSMUST00000104216 127 ntBASIC2.1□□□□□ -2.07
Sdc1P18828 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
Sdc1P18828 Gm6587-201ENSMUST00000120219 613 ntBASIC2.1□□□□□ -2.07
Sdc1P18828 Gm11321-201ENSMUST00000121257 902 ntBASIC2.1□□□□□ -2.07
Sdc1P18828 Gm12276-201ENSMUST00000121709 301 ntBASIC2.1□□□□□ -2.07
Sdc1P18828 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 129.6 ms